Information report for Rsa1.0_01129.1_g00005.1
Gene Details
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Functional Annotation
- Refseq: XP_018447113.1 — PREDICTED: trihelix transcription factor GTL1-like isoform X1
- Swissprot: Q9C882 — GTL1_ARATH; Trihelix transcription factor GTL1
- TrEMBL: A0A397YAF1 — A0A397YAF1_BRACM; Uncharacterized protein
- TrEMBL: M4F6M1 — M4F6M1_BRARP; Uncharacterized protein
- STRING: Bra036731.1-P — (Brassica rapa)
- GO:0008361 — Biological Process — regulation of cell size
- GO:0010090 — Biological Process — trichome morphogenesis
- GO:0030308 — Biological Process — negative regulation of cell growth
- GO:0032876 — Biological Process — negative regulation of DNA endoreduplication
- GO:0042631 — Biological Process — cellular response to water deprivation
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:2000037 — Biological Process — regulation of stomatal complex patterning
- GO:2000038 — Biological Process — regulation of stomatal complex development
- GO:0005634 — Cellular Component — nucleus
- GO:0043565 — Molecular Function — sequence-specific DNA binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Rsa1.0_01129.1_g00005.1|Raphanus_sativus|Trihelix|Rsa1.0_01129.1_g00005.1
ATGGAGCAAAGAGGTGGTGGTGGTGGTGGTGATGAAGTGGTGGAGGAAGCTTCACCGATCAGCTCAAGACCTCCGGCGAATATGGAAGAGCTTATGGGATTCTCAGCAGCGGTGGATGACGGTGGAGGATTGGGAGGAAGCTCATCGTCTTCATCGGGAAATAGATGGCCAAGAGAAGAAACACTTGCACTTCTTAGGATCCGATCTGAAATGGACTCTACTTTCCGTGACGCCACTCTCAAAGCTCCTCTTTGGGAACACGTTTCCAGGAAGCTGTTGGAGCTTGGTTACAAACGCAGTGCAAAGAAATGCAAAGAGAAGTTCGAAAACGTTCAGAAATATCACAAACGCACCAAAGAAACGCGCGGTGGTGGTCGCCATGAAGGTAAAACATACAAGTTTTTCTCTCAGCTCGAAGCTCTCAACACTACTCCTCCTCCCTCTTCTCTCGACGTAGCTCCTCTCTCCGTCGCCAATCCAGCTCAGCAGCCTTCTCCTTCTTCTTCCCAATTCCCCGTTTTCTCTCTAACGCAAACGCCACCGTCCCAACCGCTTCCACCGCACACAGTCTCCTTTACTCCCAATCCATTACCTCCTCCTCCTCTTCCTTCAGTAGGTCCCACATTTCCCGGAGGTACCTTCTCTTCTCACAGCTCATCGACGGCTTCAGGAATGGAGTCTGATGATGAAGACAATATGGACGTGGATCTGGCGGGTCCCAGTAGCCACAAACGCAAACGTGAAAACCGAGGCGGCACTGGACCCGGCAAGATGATGGAACTATTCGAAGGTTTGGTGAGACAGGTGATGCAGAAACAAGCGGCGATGCAACGGAGCTTTCTCGAGGCGGTTGAGAAGAGAGAACAAGAACGTCTTGCTCGAGAAGAAGCTTGGAAACGCCAAGAAACGTCTCGGTTAGCTCGAGAGCACGAGATCATGTCTCAACAGCGAGCGGCTTCTGCTTCTCGCGACGCTGCGATCATCTCATTGATCCAGAAAATTACTGGCCATACCATTCAGTTACCTCCTTCTTTATCATCACAACCGCCCCATCAACCGCCACCTGCCGCTAAACGTCCTTCACAAGCTGTAGAACCACCTCATTTACAACCAATTATGGCGGTTCCACAACAACAAGTTCTTCCTCCACCACCTCCTCCTCCTCCTTATCAACAACAAGAGATGATTATGAGCTCGGATCAGTCGTCACCATCATCATCGCGTTGGCCGAAGGAGGAGATTCTTGCTCTTATAAACCTGAGAAGCGGAATGGAACCAAGATACCAAGATAATGTCCCTAAAGGACTTTTATGGGAAGAGATTTCAACGTCAATGAAGAGAATGGGATACAATAGAAATGCAAAGAGATGCAAAGAGAAGTGGGAAAACATAAACAAATATTATAAGAAAGTTAAAGAAAGCAACAAGAAACGTCCTCAAGATGCTAAGACGTGTCCTTATTATCACCGCCTTGATCTTCTTTACAGCAACAAAGTACTTGGTAGTGGTGCCGGTTCCAGCACTTCTGGTCTACCTCAAGACCAATTATCAACGATAATACAAAAGCAGAGTCCAGTCTCTGCAATGAAGCCGTCACAAGAAGGGGATGTTAACGTCCATCAAACTCACGGCTCAGCTTCAAGTGATGAAGAAGAACCAAGAGAGGAAACTCCACAAGGAGCGGAGAAGCCAGAAGACCTTGTGATGAGAGAGCTGATGCAACAAAAACAACACCAAGAAGATTCAATGATAGGTGAATATGAAAAGATTGAGGCGTCTCACAACTATAATAACATGGAAATAGAGGAAGAAGAGATGGAGATGGATGAAGAACTAGACGAGGATGAGAAATCCACGGCTTATGAGATTGCATTTCAGAGCCCTGAAAAAAGAGGAGGTAATGGCCACACAGAGTCACCTTTCTTGACAATGGTTCAGTAA
Protein Sequence:
- >Rsa1.0_01129.1_g00005.1|Raphanus_sativus|Trihelix|Rsa1.0_01129.1_g00005.1
MEQRGGGGGGDEVVEEASPISSRPPANMEELMGFSAAVDDGGGLGGSSSSSSGNRWPREETLALLRIRSEMDSTFRDATLKAPLWEHVSRKLLELGYKRSAKKCKEKFENVQKYHKRTKETRGGGRHEGKTYKFFSQLEALNTTPPPSSLDVAPLSVANPAQQPSPSSSQFPVFSLTQTPPSQPLPPHTVSFTPNPLPPPPLPSVGPTFPGGTFSSHSSSTASGMESDDEDNMDVDLAGPSSHKRKRENRGGTGPGKMMELFEGLVRQVMQKQAAMQRSFLEAVEKREQERLAREEAWKRQETSRLAREHEIMSQQRAASASRDAAIISLIQKITGHTIQLPPSLSSQPPHQPPPAAKRPSQAVEPPHLQPIMAVPQQQVLPPPPPPPPYQQQEMIMSSDQSSPSSSRWPKEEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYYKKVKESNKKRPQDAKTCPYYHRLDLLYSNKVLGSGAGSSTSGLPQDQLSTIIQKQSPVSAMKPSQEGDVNVHQTHGSASSDEEEPREETPQGAEKPEDLVMRELMQQKQHQEDSMIGEYEKIEASHNYNNMEIEEEEMEMDEELDEDEKSTAYEIAFQSPEKRGGNGHTESPFLTMVQ