Information report for PSME_00011199-RA
Gene Details
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Functional Annotation
- Refseq: XP_024359363.1 — trihelix transcription factor GTL1-like
- Swissprot: Q39117 — TGT2_ARATH; Trihelix transcription factor GT-2
- TrEMBL: A0A0C9S5C5 — A0A0C9S5C5_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_12946_2942 transcribed RNA sequence
- STRING: PP1S85_58V6.1 — (Physcomitrella patens)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >PSME_00011199-RA|Pseudotsuga_menziesii|Trihelix|PSME_00011199-RA
ATGCAATCTGGTCATGGGCAATATGGGGGGGTTCCGGGGATCCAGCAATTTATGGTGGAGGGTTGCTCTAGTCCTCATGGATTGTTTGCAGCTCTTTCACAAGAACAAATTAATCATAATACTAATCACCCTCTACAGATTAATCAGTCCCAGGCCCAGGCACAGGCACAGGCACAGGCACAGGCCCAGGCTCATCAGCAGGCCGGCTTTCAAAATCAGGTCCTGCAGCAGCAGCATCAGCTTGGGTTGCAGGGACCAGAATCTTCCGAGCAGAATCGTTCCCGTGACCTCAACAGTAATAAGGCTTACGGCAGCCTGAGAGAGGCTACAGCTGGTGGTCATTTGCAAGGACGGCACCAGGTTAATCCTGCTCAGAATCTTACAGACGATGATGGGGTTGGAGATGAGGGTGAAAGAGGTGGCGGGGGTGTTAACAGATGGCCTCGCGAAGAGACACTGGCGCTCCTCAGGATCCGTTCTGGGATGGACTCCAATTTCAGGGACTCGAATATCAAAGGACCGCTCTGGGAAAACGTCTCACGGAAGCTTGGCGAGCTTGGGTATAGCAGAAGTGCGAAGAAATGCAAAGAAAAGTTCGAAAATATCAGCAAATACTATAAGAAAACTAAGGATGGGAGAATCGGAAGGCAAGATGGTAAGAGTTACAGGTTTTTCAGTGAGCTTGAAGCTCTTTATAGCAACAGCCATGGCGGTTCTCGTTCCAGTATTGAAAATCCCAATCGTACTGCGTCTGTCCAAGAAGTTACAGACATTGGAGGACCTGAAAAAGCCAGCAATGCAGCAACCCTAAATCTGTCGTCGGATAACACCTCAGAGGATGATCAGTATAATAATAACCGCCAGAACCCTATGTCTCACAAAACCCATGAACAGGTTAACAAGAAGAAGAGAAAGAGGAAGCATTTGGCATCGGTCACGACATTCTTCGAGAGCTTGGTAAAGCAGGTTATGGGGCATCAGGAGGAACTACACAGGAAATTCCTAGAAGCATTAGAGCGCAGAGAGCAGGAGAGATTGAATAGAGAAGAAACCTGGAAGCGTCAGGAAATGGCCCGTTTAAACAGAGAAACCGAGCTTCGTGCACAGGAGCATGCCCTTGCATCGACTCGTGAAGCAGCTATTGTGGCATTTCTGCAGAAAATAACAGGACAGAATCTGAATCTTCCCACTTCTGCCACACCACTCTCAGTACCAACTGAAACACAACAAGACCAGGAGAAATTAGCAACTGATGAAGTTATGGCCGATCTTAATAGCAAAAGGTGGCCTAAGCCTGAAGTACAGGCCTTGATAAGGCTACGCAGTAACATGGATGTCAAATTTCAAGAGCCAGGATTCAAAGGACTTCATTGGGAAGAGATATCTTCTGGAATGGCTCGCCTTGGATTCCACAGAAGTGCTAAGAGATGCAAAGAGAAGTGGGAAAACATCAACAAATATTTTAGGAAGACCAGGGATAACATGAAGAAACGCCCCCAGAATGCGAAGACATGTCCTTACTATGATCAGCTTAACCTGTTATACAGTAATAATCCCAAGTCTAACAAAATGGAAGGCCATTCCTCTGATGATCAAGCTGATCCTGACCAGGACAACAATAATGATAATAATAATGGAGATGATGATGAACATGATCAAATTAGGCCGTCTGATTCAGAACTTTTAGCAGCTATGATCCATGGAGATCAGGCCGGGGGACTACCCTTGTCAAAAAACAATGCTGTAACTACTACTGTGCAAGACCATCTCTTCCAGGACGGCCGTCCTATTGTTCAGGCACAGAAGCGCTTCAAAACAAAACAGCATCTGCCTGCTGGGATCCAAGCTTCGAATCCGCTCCGCATTGTTTCTGAAAGTGGACCCAAACTCAATCCCTTTGAAGACACATTCTCAGGCAATATTAAAAAGGGCACAAACATGGACAGTTTGGTAAAAGAAATGCTAGAGATGCAGCAGCATCAGAAATTTCTTGATGCTTTTGAGAGGAGAGAACATGAACAAGAACAACAACAAAGCATGAGCAGGGATGAGAGACAGCAGCACCAACACCCAGATGAAACAACACAAGATGATCGCTCACAGTCTGCTCTGATGGCTTTGGTGCATAAACTAACTGTGAATGCTGCGGATTATTCTACAGGATGA
Protein Sequence:
- >PSME_00011199-RA|Pseudotsuga_menziesii|Trihelix|PSME_00011199-RA
MQSGHGQYGGVPGIQQFMVEGCSSPHGLFAALSQEQINHNTNHPLQINQSQAQAQAQAQAQAQAHQQAGFQNQVLQQQHQLGLQGPESSEQNRSRDLNSNKAYGSLREATAGGHLQGRHQVNPAQNLTDDDGVGDEGERGGGGVNRWPREETLALLRIRSGMDSNFRDSNIKGPLWENVSRKLGELGYSRSAKKCKEKFENISKYYKKTKDGRIGRQDGKSYRFFSELEALYSNSHGGSRSSIENPNRTASVQEVTDIGGPEKASNAATLNLSSDNTSEDDQYNNNRQNPMSHKTHEQVNKKKRKRKHLASVTTFFESLVKQVMGHQEELHRKFLEALERREQERLNREETWKRQEMARLNRETELRAQEHALASTREAAIVAFLQKITGQNLNLPTSATPLSVPTETQQDQEKLATDEVMADLNSKRWPKPEVQALIRLRSNMDVKFQEPGFKGLHWEEISSGMARLGFHRSAKRCKEKWENINKYFRKTRDNMKKRPQNAKTCPYYDQLNLLYSNNPKSNKMEGHSSDDQADPDQDNNNDNNNGDDDEHDQIRPSDSELLAAMIHGDQAGGLPLSKNNAVTTTVQDHLFQDGRPIVQAQKRFKTKQHLPAGIQASNPLRIVSESGPKLNPFEDTFSGNIKKGTNMDSLVKEMLEMQQHQKFLDAFERREHEQEQQQSMSRDERQQHQHPDETTQDDRSQSALMALVHKLTVNAADYSTG