Information report for Pp3c18_7640V3.6.p
Gene Details
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Functional Annotation
- Refseq: XP_024402692.1 — zinc finger BED domain-containing protein 4-like isoform X1
- Refseq: XP_024402693.1 — zinc finger BED domain-containing protein 4-like isoform X1
- Refseq: XP_024402694.1 — zinc finger BED domain-containing protein 4-like isoform X1
- TrEMBL: A0A2K1J0A2 — A0A2K1J0A2_PHYPA; Uncharacterized protein
- STRING: PP1S299_56V6.1 — (Physcomitrella patens)
- GO:0003677 — Molecular Function — DNA binding
- GO:0046983 — Molecular Function — protein dimerization activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Pp3c18_7640V3.6.p|Physcomitrella_patens|Trihelix|Pp3c18_7640V3.6.p
ATGGAGAATGGGGTTAATGTGGAGCCGAGGGCAGAGGATGAGCTCGGTAGAGGGCTGGAAGATGTCATTGCGACGACTGAAGAGCTGGAAATGGAGGTGAGGGATGACAAGATGCAGGAATTGCACGTTGGGGGGCTCAGCAGCCACGGCCACGCACATTTGGAGCATGAGGGTGATCATGCCGGAGAGTCTATTCATGATGCGATGATGGTGGAGAGTAGGGGAGATATTGGTGTTGAGCATAGAGATCCTAAAGCGATGGAAGAGGAAGAGGACCACATGGGTCTAGACGAGGATACGAGGATAGGTGGAGGAGAACCAGATAAAGGACAAGATAATAAAAATTACAAGGAAGGTCCGTGGGATGTTTTGGAGATGCTTGTCTTGGTATCTGGGATGAAGGAGTACGCAGAGACTGTGGGTGACCACTCTCTGGAAGACCACGTTAATGAACAGGAGAAATGGCATTCGATAGAGAATTACTGTTGGGGTCAACTTGTCCAACGCAGTGCATTAGATTGTCATGAGAAGTGGTTGTCTCTGAGTGCGGAGTTCAAGAGGGTGAAAGACTTTGAGAGTAGCATGGTGCAGGATCAGAAGTCCTACTGGGAAATGACTTATGATGAAAGAAACAATTCCCAACTTCCAGGGGATTTCTCGCAGGAGGTTTACAACATGCTGTGGCAGTGGGATGACAGGGATCGAATTGGTGAAGTAGGGACATCTCTAATTCTGGACGATGAAATTAATGTCAAGGAACAATCACCGTTTGGATCAATGGTTCGCACTCGAAAACGGACCGATCGTGGGGAATCTCAGATTTCCCGAAAAGCTTCACGAGGAGAGGCGGGGATGGAAGCGACATTCCTTGGTTCCCAGCTAATGATGTTTGGTAACCAGCAAGTGGATATGGGTGGTGAGGGTACAGGTTCACTTGCGCTTGTCGAGCCAACTGAAGAGATACAGGCATCTGAGGATGATGAAGTTTGGAACGCTCAACTTGCCCTACTGCGTGCCAATCAGCAGTTTTGGGCCCCGCATGGACGAGCTTCTGCAACGTGGGCTTTTTATGTTGTGAATGATAATTCAGAGCCAGACTCCGGACGCCCTCAGCAAATGCGTTGTGCTATTTGCCATCCCGCTCAACAAGAGCACAGACCAAATAGTGCCACGCGAGTAAGGAAGGGTGTCGTAACTTACAACAAGCAGCACGGCACAACGTCTATGAAAAAGCATGTAGCTCAAGAGCATGGTGACATTTTTACCAAGTATAAAGCAACGCGTAAGCCAAGTGTTATGACACGGGCAGAGGGCCAACACTCGCGAAGGATGAAGAAAGATCCTTCGCCTTCTGTACTCTCCGATTTTTTGGGCAATCATAGTTCCAGCAAGAAGTCCGACCCCGCACAAGAAAGACTTCGGGAGGATCTGGTTCTGTATGTGGCAAAAGGTTGCCATCCCATTTCTATGATTGAGAATGTCTGGCTGAAAAGATTGCTCATGAACAGACAATGTGGCCGCTTGAATTTTCCCGATGGCCGCCAATTAGTAGATGAAGTTGTTCCTCGTATGGTTTCTCAAACAATGGAGAAGCACGTCTTGCCTGCGTTACGTGGTTGTGTGAGTGCTACGGTAACTTTTGACTTGTGGATGGTACGGAGGGGCGTCAACACTATTGCTTTGGTGGTTCATTTTATCAACGAGTCATGGGAGACCTGTCGTGTGACTATTGGTGTGTTTGAGGCACCTGAATCTGCCGGAGAAGAATTGGCCTTGGAGGTAAAAGATCTTTTCAGTTCCTTCAACTTGGCCGAAAAAATCATTGCATTTGTCGTGAATGATGATGATCCAAGCCTCCGTTCTCTCGCCGAGGCACTTTCTAAGCAGGTATCATGTTCTCCGCTCCAGTTGCCTGAGCCTTATGCAGGGACTTGTTTTGGACACGTTCTGTTCAAAGCATGCGAAAATGCAACGACTGATGAGAAGGGATGTGATGATTCGAGGGCATTTAGCATTGAAGCTACTGTATCTACTCTGAAGGAGACTATTTCTTGGACTACTAGATCAGCAAAAACGAGGCATCAGTGGATGAAAGCCTGTTTTGATGTTGGTCTTCAGCCTCGCAAGCTAAGAGCGCCCATGATGGGAAGGTTTGCGTCGAAGGTGATTCTTTGTCAGGAGGCCTTGGATTATCAGCATGCCTTAAGTTTGTATTACGGTTCCCAGAGTAATGACATGTACATCGAGGTTCCCAGCGTAGAGACGTGGGCTGTTGCAAAGGCTGTCACTGATGCTCTTACTCCCGTGCTTCAACAATGCATAATGAACCAGAGTAAAGCATACTGGTTGTTATCCGATGCAATTGCTACTGCGCTTAGTTTGTGCATACAACTACACAGGGAGCGATTGCCTAACAGAAGTTTGGCCGACCCAAAACTGGATCCAAGCTTTGAAGCCGCGCTGGATGTTTCACTAGATCGCATGAGGCAAGAGCTTCAAATGACGAGGCAATAG
Protein Sequence:
- >Pp3c18_7640V3.6.p|Physcomitrella_patens|Trihelix|Pp3c18_7640V3.6.p
MENGVNVEPRAEDELGRGLEDVIATTEELEMEVRDDKMQELHVGGLSSHGHAHLEHEGDHAGESIHDAMMVESRGDIGVEHRDPKAMEEEEDHMGLDEDTRIGGGEPDKGQDNKNYKEGPWDVLEMLVLVSGMKEYAETVGDHSLEDHVNEQEKWHSIENYCWGQLVQRSALDCHEKWLSLSAEFKRVKDFESSMVQDQKSYWEMTYDERNNSQLPGDFSQEVYNMLWQWDDRDRIGEVGTSLILDDEINVKEQSPFGSMVRTRKRTDRGESQISRKASRGEAGMEATFLGSQLMMFGNQQVDMGGEGTGSLALVEPTEEIQASEDDEVWNAQLALLRANQQFWAPHGRASATWAFYVVNDNSEPDSGRPQQMRCAICHPAQQEHRPNSATRVRKGVVTYNKQHGTTSMKKHVAQEHGDIFTKYKATRKPSVMTRAEGQHSRRMKKDPSPSVLSDFLGNHSSSKKSDPAQERLREDLVLYVAKGCHPISMIENVWLKRLLMNRQCGRLNFPDGRQLVDEVVPRMVSQTMEKHVLPALRGCVSATVTFDLWMVRRGVNTIALVVHFINESWETCRVTIGVFEAPESAGEELALEVKDLFSSFNLAEKIIAFVVNDDDPSLRSLAEALSKQVSCSPLQLPEPYAGTCFGHVLFKACENATTDEKGCDDSRAFSIEATVSTLKETISWTTRSAKTRHQWMKACFDVGLQPRKLRAPMMGRFASKVILCQEALDYQHALSLYYGSQSNDMYIEVPSVETWAVAKAVTDALTPVLQQCIMNQSKAYWLLSDAIATALSLCIQLHRERLPNRSLADPKLDPSFEAALDVSLDRMRQELQMTRQ*