Information report for Pp3c18_11300V3.2.p
Gene Details
|
|
Functional Annotation
- Refseq: XP_024402443.1 — trihelix transcription factor GTL1-like
- TrEMBL: A0A2K1J0Q1 — A0A2K1J0Q1_PHYPA; Uncharacterized protein
- STRING: PP1S19_341V6.1 — (Physcomitrella patens)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Pp3c18_11300V3.2.p|Physcomitrella_patens|Trihelix|Pp3c18_11300V3.2.p
ATGCAAAACACGGGGCAGTATGGGGTCTCAGACTCGCCACAGTTCGTGGTGGGGAGACCACCTGCGCACATTTTCTCAATCTCTCATGACAATATGTCCATCTCGTCTCCCTCAGCTGGCCATCCGCTCCCTGGTCATCACCCGCAACACCACCTGCCCCATCACTTGCAAGCACAACACCACCACTACGGCCCGCACCCGGGTCACCAACCTCACCCTACCTTACAAGCCCACCAGCAAATCCACCAAACTCAGTCCCCTCATGCCGCTCACGCCCCACACCCTCAACATCCGCAATTCCCGCTGGCGCAGCATCCTCAAGGCCAGCAACAGCAACAACCAGCCCAACCTCATCAGCCTTCTCTTCATCAGGATGTTGCACAGCACCAGCAGGCTCAACAGCAGGCTCAGCAACAGCAGGCTCAACAGCAGGCTCAGCAACAGCAGCAACAACAGCAGGCTCAACAGCAGGTGCAGCAACAGGCGCAGCAAGTTCAGCAGGTCCAGCAAGCTCAGCAAGCTCAGCAACAAGCGCAACAGGCTGCTCAGCAGGCGCAGCAGCAGATGGTGCAGCAGTTAGGTCTTGGGGGTCCAGACTCGCCGGAGGTTCCATCGCCGGGTGTTAGTCGGCCCTCACCCACGAATTACAGCCAGCAGCAGATTGTGAGCGCGGCGCAGGATGACGATGGGCTTGAGGAGGAGGGTAGGAGTACTGGTGCCAATCGGTGGCCCAGGCAGGAGACACTTGCGCTCATAAAGATCCGGTCGGACATGGATGCTAACTTTCGTGATTCGGGACTCAAGGGGCCTCTCTGGGAAGATGTTTCGAAAAAGCTTGCTGAACTTGGGTACAATAGAAGTGCAAAGAAATGCAAGGAGAAATTTGAGAATGTGCACAAGTATTATAAGAAGACCAAGGATGGTAGGGCTGGAAGGCAAGATGGTAAAAATTATCGATTCTTTAGTCAGTTGGAAGCTCTCTACGGGGGCCAGCAGACTTCTGCTCAATTGGAGAGTAATGTTGCAGAAGTGGCAGTCGCTAGTCTCCTAGCAGGATCCACTGTGCCAGGCATAGCGGCAACTGATGACTACAATATCTCCGCTCCGAGGCCGTCTGAAGTTAGCACCGGTGTTACACTGTCAGACTCGTCTGAAGATGATTACGATGAGCTTGGGAGTGGTGAAGCTGACAATCAGGAGAAGTCGCGAAAGAGGAAGCGCATGGAAGGGGGTAAGTCTGGGACGTCGAAGCTCGACTACTTTGAATCACTGATGAAAAATCTAATGGATAAACAGGAGAGTATGCAACGGAAGTTCTTGGAATTCATGGAAAGGCGGGAACAAGACAGACAGGTCCGAGAGGAAGCGTGGAGACGGCAGGAAATAGCGCGGATGGCGCGGGAGCATGAGCTTCGAGCTCAAGAGCATGCCCTAGCTGCGACCAGGGATGCGGCCCTAGTAGCATTCTTACAGAAGGTAACTGGGCAAACCCTCCAGATTCCGCAGTTCCCCTCGCGGCCTCCTATAGTCACCGTCCCTCCATCCATAGATTCCGTTGTGGCAGCAGCTCAAAAGCAGCAGTCTACCCCTACCCCCGTAACTCCTGTCCCAGCTCCAGCTGCTCCTCCCACCACTGCTTCTCAGCAACTAGTAGTTGCCAATGTAGACGACATTGACAAGGATTCTCCTATTGATCCCAACAGTAAGAGATGGCCGAAACCGGAAGTGCTGACACTGATCAAGTTGCGGAGTGACATGGAGTCGAGGTTTCAGGAGGCGGGACCGAAGGGTCCACTATGGGAGGAGATTAGTCAGGGAATGGCTTGTTTGGGATATAACAGAAATCAGAAGAGGTGTAAAGAGAAATGGGAGAACATCAACAAGTATTTTAGAAAGACTAAAGAGAGTAACAAGAAGCGACCCGAGAATGCTAAGACTTGTCCATATTTTCATCAATTAGAGGTGTTGTATCGCCAGGGTGTTCTTGGTACCCCAAACAACAAGCAGGTCTCGAAGGTGTCAGCGGACTCACCGGCTCGTGAGCTTGTCGACCACCAAGCTGTGCCTTTAGCACACCGCATCGAAGCTGCAGCTGGCAAAGGAGGCGACACCGAGATGTTGAAGATGCTGCCCGCGGCCGCCGAAGCTGTGCAGAATGCGGCCTCCGCCGGAAACGGCACCCCTAGTGCCGCTGTGCATTTTTTCTCAAGCCCTGAGAATGGAAGCAGCGCGGAGCGAGGCGGTCCCAAGCAAGGCTCGGAGCCATCCATGTGA
Protein Sequence:
- >Pp3c18_11300V3.2.p|Physcomitrella_patens|Trihelix|Pp3c18_11300V3.2.p
MQNTGQYGVSDSPQFVVGRPPAHIFSISHDNMSISSPSAGHPLPGHHPQHHLPHHLQAQHHHYGPHPGHQPHPTLQAHQQIHQTQSPHAAHAPHPQHPQFPLAQHPQGQQQQQPAQPHQPSLHQDVAQHQQAQQQAQQQQAQQQAQQQQQQQQAQQQVQQQAQQVQQVQQAQQAQQQAQQAAQQAQQQMVQQLGLGGPDSPEVPSPGVSRPSPTNYSQQQIVSAAQDDDGLEEEGRSTGANRWPRQETLALIKIRSDMDANFRDSGLKGPLWEDVSKKLAELGYNRSAKKCKEKFENVHKYYKKTKDGRAGRQDGKNYRFFSQLEALYGGQQTSAQLESNVAEVAVASLLAGSTVPGIAATDDYNISAPRPSEVSTGVTLSDSSEDDYDELGSGEADNQEKSRKRKRMEGGKSGTSKLDYFESLMKNLMDKQESMQRKFLEFMERREQDRQVREEAWRRQEIARMAREHELRAQEHALAATRDAALVAFLQKVTGQTLQIPQFPSRPPIVTVPPSIDSVVAAAQKQQSTPTPVTPVPAPAAPPTTASQQLVVANVDDIDKDSPIDPNSKRWPKPEVLTLIKLRSDMESRFQEAGPKGPLWEEISQGMACLGYNRNQKRCKEKWENINKYFRKTKESNKKRPENAKTCPYFHQLEVLYRQGVLGTPNNKQVSKVSADSPARELVDHQAVPLAHRIEAAAGKGGDTEMLKMLPAAAEAVQNAASAGNGTPSAAVHFFSSPENGSSAERGGPKQGSEPSM*