Information report for Phvul.004G124000.1
Gene Details
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Functional Annotation
- Refseq: XP_007152366.1 — hypothetical protein PHAVU_004G124000g
- TrEMBL: V7C501 — V7C501_PHAVU; Uncharacterized protein
- STRING: XP_007152366.1 — (Phaseolus vulgaris)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Phvul.004G124000.1|Phaseolus_vulgaris|Trihelix|Phvul.004G124000.1
ATGGGCGACAAGGGAGACACAACCAAGAAGCAACAACAACAACAACCTCAATCACACCTCCATCACCAACACCAGCAGCAGCAACAACAAACTCAACAAATTTCATCTTCTCCTAAAGCCCCACGTGAGGAAGCTATCACAGAAGTTAGGCCTATCCACCACCATCAACAATTATCATCAGTTGTTGTTGTGACTGGAGCACCCCCTTTCATTTCCAGTCCTTTATATGTTTCCAGCGGTGCAAGTTCCTCACCCTATGAGCCTCAGTTTGAGACACTGAACCCCAAGAGACCCAGATATAGTGGACAATGGAAGCAGCTTCTACCTTCCCCTCCTTCGCAGCCAAAACAGTCCCAAATGGCCATGCTTCCCACCACAGAATCAAGCCCTTCACCAACCACACATACTTCATCAAATCCACAACAACCGCAAACACAAACAGTTTCTTCATCAGACACCTCCTCATCTCCAACTCACTCTCTCCCATTACCCTCAGGAGGTTCTGGCCAAGAAGGGAGCAACCAAGAGGGAGAGCAAGTTCACCAGCAGCTCAGAAAGGGGAAATATGTGAGCCCAGTTTGGAAGCCCAACGAAATGCTGTGGCTAGCAAGGGCTTGGAAAGAACAATACCAAGGTGGTGGTGGTGGTGGTGGTGGTGGATCTGAATCATCTTCAAGGGCAGAACAGCAACAACAAGCGGAATTGGGAATCACAAGAGGTAAAACTAGGGCTGATAAAGATAAAGAAGTGGCTGAGTTTCTCAAGAGGCACGGGGTCAATAGAGATGCTAAAACTGCAGGTACTAAATGGGATAACATGTTGGGTGAGTTCAGAAAAGTATATGAATGGGAAAGAGGAGGTGAGAGGGAACAAATTGGGAAGAGTTATTTCAGGCTTTCACCGTATGAGAGAAAGTTACATAGACTCCCGGCTTCTTTTGATGAAGATGTTTTTGAAGAACTTGCACAGTTCATGGGTTCCAGAATGAGATCCTCTCATGGCAGGGCAGGTTCATCTTTTGTGTCAGGAGACGAAGCTAGAACAGCTCTTGCTGCTGCCAGAGCTCTTCCACCACCACCTCGACCCTTCAAAGATGATGAAATCCCTCTCTCAGCTACGACGAAACAATTGGCCATAACAAGTGGTAGCGAGCCTTTCTTTCAAGGCTCAAGAGGGGTCTTATTAGGGTTAGACACGCTCTTGGATGTTTCAGGTTCTTCATCATCTAAAGAGCTCCGTAGAATTGGGAAGATAAGAATGACATGGGAGGAATCAGTGAGTTTATGGGCAGAAGAAGGGGAAATACATAGAGGGAGAGTGAGGCTTCAAAGTTCAAGCTTTCTGAACGCGGATGAACTCACTTGCTTTGATGATGCCATGGTGCCTTGTCCCATGGAATATTTCGAAGATGGGCCTCTGAAAGGTTTTTCTGTTGACAGATTCGTTTCGGGACAGCAAGTTAAAGTTTTTGGCAGAAGAAAGTCTTCCCCGGCCTCAGATTCTTCTGGTTTTGCTGAAAGAGTCCAACTTCCCTCCAAAGCACTTCCCATTAGATCGATTGCTACATTGGATTTTCGAGACCCAACTGAATACTACATGGAATGTCTTTTACGTGCGTCCCCACAAACCCTCCCAAGCCTCTACGAGTTAAAGCGTCACCTACAAGAGCCACCACCGGAAGACCTACGTTTTCCTCTCCGAAGAGACGTGTACGAGGAACTTCCCCAAGGGAAGGAACTCTTCTTCACAACCACACCCGAGCCCTTGGACTGCAGAACCATAATGTACGACATCGTGGGCCCCATAATCCGCACCAGTAACCCTAGCCTCTCCCTCGCTACGTCATCAAGCCGAGACTCCTTCATTCCCCTGTGGGACGAGTGCATCAACCGCGTCATCCAAAAGTTCTGCCCCGAAGAACTCGTCCTAATCCGAAAACCCACGTCACCCCCACCAGAATCAACGACCCAGTTGCAAGACCAATGGCCCAACGTAACCGGTTTCGTCAACAATTACTGTCTCTGGAGAGGCGAAGAAACGCACCAGTTGAAAGAATCGCAACCCAATCCGTCAACCACGTTAGTAGGGAAACTTCTGTGGACCTACATGGATCTTCCGTACATTCTCGGCTACCACGCGGTGGCCAACACTGTGACGTTTTGCGCGCTCAGCAGGTCGCAGGACGGAATAATTAACCGCACCGATTTACACGAAGTAAATTTGACCACCCCAGTGGAGAAGCTGAAAGCTTTGGTTCCGTGTTTCAGAATAGGGTTGTTGTTAGCGTTGTTGAGCAAGCGTTGCGCGAGTATAAGTAACTGTAAAGGGTTTACGTATAGTGATTTCGAGAGGGTTTGCTACGGTAACGGGGTGGTGACGGAGGTGACGCCGACCACGTGCATGAGGGTGTTCATGGAGAAGCGGAAGTGGATGGCGGTAAAGGAGGTTTACGAGATTCTGGACCACAGGATACCGCATGCAGAGGTTTTGGTGGGTTTTTCGGAGAGGGAACTGGCGTTGTCGTTTAAGCCAAGAGGGTGTCGCGTGAAACCGGGGAACTGCGAGGAGTTGGTGGAGGCATTGAAGTTCGTGACGAAGGCGATGGTGGCTTTACACGACTTGTCGTTTATGCATAGGGATTTGAAGTGGGAGAAAGTGATGCGGCGGAGGGATCGGGAGGAATGGTTCGTTTGCGGGTTTGACGAGGCGGCTGGGGCGCCGGAGCTGAAGGGGCACGTGTCAGGGGCACGTGGGAGCCACGCGCCGGAGATGGAACGGGGGTTGCATGGGGTGAAGGTAGATGTGTGGGGAGTGGGGAATTTGATTAGGACGTGTGGGTTGGGAGGGGTGCCGAAGATGCTGAGGGAGTTACAGAATCGGTGCATGGAGCAGAACCCGGAGCAGAGGCCCACGGCGGCGGACTGCTACCACCACCTGCTACAGCTGCAGTCGTCGCTGTCAGCCGCCGCCGGGGGAGTCGTGATGATGTGA
Protein Sequence:
- >Phvul.004G124000.1|Phaseolus_vulgaris|Trihelix|Phvul.004G124000.1
MGDKGDTTKKQQQQQPQSHLHHQHQQQQQQTQQISSSPKAPREEAITEVRPIHHHQQLSSVVVVTGAPPFISSPLYVSSGASSSPYEPQFETLNPKRPRYSGQWKQLLPSPPSQPKQSQMAMLPTTESSPSPTTHTSSNPQQPQTQTVSSSDTSSSPTHSLPLPSGGSGQEGSNQEGEQVHQQLRKGKYVSPVWKPNEMLWLARAWKEQYQGGGGGGGGGSESSSRAEQQQQAELGITRGKTRADKDKEVAEFLKRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQIGKSYFRLSPYERKLHRLPASFDEDVFEELAQFMGSRMRSSHGRAGSSFVSGDEARTALAAARALPPPPRPFKDDEIPLSATTKQLAITSGSEPFFQGSRGVLLGLDTLLDVSGSSSSKELRRIGKIRMTWEESVSLWAEEGEIHRGRVRLQSSSFLNADELTCFDDAMVPCPMEYFEDGPLKGFSVDRFVSGQQVKVFGRRKSSPASDSSGFAERVQLPSKALPIRSIATLDFRDPTEYYMECLLRASPQTLPSLYELKRHLQEPPPEDLRFPLRRDVYEELPQGKELFFTTTPEPLDCRTIMYDIVGPIIRTSNPSLSLATSSSRDSFIPLWDECINRVIQKFCPEELVLIRKPTSPPPESTTQLQDQWPNVTGFVNNYCLWRGEETHQLKESQPNPSTTLVGKLLWTYMDLPYILGYHAVANTVTFCALSRSQDGIINRTDLHEVNLTTPVEKLKALVPCFRIGLLLALLSKRCASISNCKGFTYSDFERVCYGNGVVTEVTPTTCMRVFMEKRKWMAVKEVYEILDHRIPHAEVLVGFSERELALSFKPRGCRVKPGNCEELVEALKFVTKAMVALHDLSFMHRDLKWEKVMRRRDREEWFVCGFDEAAGAPELKGHVSGARGSHAPEMERGLHGVKVDVWGVGNLIRTCGLGGVPKMLRELQNRCMEQNPEQRPTAADCYHHLLQLQSSLSAAAGGVVMM*