Gene Details:

  • Gene ID: orange1.1g024274m
  • Gene Name: CISIN_1g024274mg, LOC102629358
  • Gene Family: Trihelix Family
  • Description: Trihelix Family protein
  • Species: Citrus sinensis
  • Source: Trihelix family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_006432827.1  — trihelix transcription factor GT-3b
  • Refseq:  XP_006471559.1  — trihelix transcription factor GT-3b
  • TrEMBL:  A0A067E9D1  — A0A067E9D1_CITSI; Uncharacterized protein
  • TrEMBL:  V4SZ12  — V4SZ12_9ROSI; Uncharacterized protein
  • STRING:  XP_006471559.1  — (Citrus sinensis)
  • STRING:  XP_006432827.1  — (Citrus clementina)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated

Family Introduction:

  • GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

Sequences:

CDS Sequence:
  • >orange1.1g024274m|Citrus_sinensis|Trihelix|orange1.1g024274m
    ATGATGACATCTTCGTCGTCGTCAGCACATGCACAGGCTGTGCAGTGGGGTAATGAAGAGACTCGGGATTTGATTGTAATTCGGGGGGAAACAGAGAGGGACTTGGTCGGAATCAAACGCAACAAGACGATTTGGGAAATTGTTAGTGTTAAATTGAGAGAGAGGGGCTATTCAAGGACACCCGATCAATGTAAATGCAAATGGAAAAATCTCGTTAATCGCTACAAGGGGAAGGAGACATCTGATCCAGATAGTGGGAGGCAATGCCCATTCTTTAATGAATTGCATGCTGTCTTCACTGAAAGAGCGAAGAATATGCAGAGATTACTTGCTGAATCTGAGGCTGGTTCTATGCAGGCAAAGAAAAGGTTTAAGAGATTGAATGCAGATGAGTTGTCCGATGAAGAAGATGATGATGAAGAACAAAGTGAGGAGGAGGAGGAGGAGGAGGAGAGGCCTGCTCGAGGTAATTCTAGGAAGAGGAAGATTGAAAGAAATGTCTCAGACAAATCCCCTAGAGCAACTAGTGGTACTGCTGGTATTCACGAAATGCTTAAGGCATTCTTTGACCAGCAACAGAGGATGGAGGTGGAATGGAGGCAAATGATGGAGAGGCGTGCTCAAGAGCGGCAATTGTTTGAGGAGGAATGGAGGCAGAGAATGGAGAAGCTTGAGAGGGAGAGGCTATTGGTAGAACAGGCTTGGAGGGAGAAGGAGGAGCAGAGGAGGATCAGAGAAGAGAGCCGAGCTGAGAGGAGGGATGCCCTCTTAACGACTCTCTTGACCAAACTCATCAATCAAAATAATCCCTAA
Protein Sequence:
  • >orange1.1g024274m|Citrus_sinensis|Trihelix|orange1.1g024274m
    MMTSSSSSAHAQAVQWGNEETRDLIVIRGETERDLVGIKRNKTIWEIVSVKLRERGYSRTPDQCKCKWKNLVNRYKGKETSDPDSGRQCPFFNELHAVFTERAKNMQRLLAESEAGSMQAKKRFKRLNADELSDEEDDDEEQSEEEEEEEERPARGNSRKRKIERNVSDKSPRATSGTAGIHEMLKAFFDQQQRMEVEWRQMMERRAQERQLFEEEWRQRMEKLERERLLVEQAWREKEEQRRIREESRAERRDALLTTLLTKLINQNNP*