Information report for OGLUM10G15720.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_025794483.1 — trihelix transcription factor GTL1-like isoform X1
- Refseq: XP_025794484.1 — trihelix transcription factor GTL1-like isoform X1
- TrEMBL: A0A0E0BCQ1 — A0A0E0BCQ1_9ORYZ; Uncharacterized protein
- STRING: OGLUM10G15720.1 — (Oryza glumipatula)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009909 — Biological Process — regulation of flower development
- GO:0010200 — Biological Process — response to chitin
- GO:0046621 — Biological Process — negative regulation of organ growth
- GO:0048442 — Biological Process — sepal development
- GO:0048498 — Biological Process — establishment of petal orientation
- GO:0090428 — Biological Process — perianth development
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0042803 — Molecular Function — protein homodimerization activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >OGLUM10G15720.1|Oryza_glumaepatula|Trihelix|OGLUM10G15720.1
ATGGCCATTTATTACCTGGAAAGGGAGGGATTAACCCACAACATGCCAATGCATGGCCATTTTTATACTCCTCTGCCCCTGAACCAAAGGCACGCGGATACCACCAACGCGGCTGACATGACACGTGGGCCCATGCGCATGTGGGCCCCACATGTCAGTGGCGTAAGCGTCTCTCCTGATGTACTGATCATTCCATCACCTCCATTCCCCAGTGGTAACACTCGTGGGGGAGGAGGAGGAGGAGGAGGTAGTAGCATGCAGCAGCAGCAGCCAGGGGGAGGAGGGGGAGGGGTGCAGCAGTTCGGCGCGGTAGCGCCGGAGATGTCGCCATTCTCGCCGGCGGGAGGAGGCGGCGGGGGGCGGATCTCCATGGCGGAGGCCGCGTCGCCCATCAGCAGCCGGCCGCCGCCGGCGCAGCAGCAGTTCGACGAGCTCGGCGTAGGCGGCGGAGGCGGAGGCGGAGGTGGGTTTGACGCCGAGGCGCTGGCGGCGGCGGCGGTCGGCGAGGAGGGAGCCAGCGGCGGCGCTGGGGGGAACCGGTGGCCGCGGCAGGAGACGCTGGCGCTGCTCAAGATCCGGTCGGACATGGACGCCGCGTTCCGGGACGCCACCCTCAAGGGCCCGCTCTGGGAGGAGGTCTCCAGGAAGCTGGCGGAGGAGGGTTACCGGAGGAGCGCGAAGAAGTGCAAGGAGAAGTTCGAGAACGTGCACAAGTATTACAAGCGCACCAAGGAGAGCCGCGCGGGGCGCAACGACGGCAAGACGTACCGCTTCTTCACGCAGCTCGAGGCGCTGCACGGCACCGCCGCCGGCGTCGTGGCGGCGCCATCGCCGGTGACGTCGCTGGCCCCGCCGCCGGCGACGGCTGTGGGCGTGTCCGGCGGGGTGCGCGCCCCCGCCGAGCCGCCGCCCGCGGTGGTGATGGGGAACGTGATGAGCTTCTCGACGTCGAACACGGAGGAGTATTCCGACGAGGAGGACTCCGACGACGAGGGGACCGAGGACATGGGCGGCGGCGGCGGTGATGAGAGGGGGAAGAGGAAGAGGTTGTCGGAGGGTGGCGCCGCCGCGGGCGGCGGTGGCGGCGGCGGCGGAGGAGGAGGGAGCGGGAAGATGATGAGGTTCTTCGAGGGGTTGATGAAGCAGGTGATGGAGCGGCAGGAGGCGATGCAGCAGCGGTTTCTGGAGGCCATCGAGAAGCGGGAGCAGGACCGGATGATCCGCGAGGAGGCGTGGCGGCGGCAGGAGATGGCGCGCCTCGCCCGCGAGCAGGAGATCCTCGCGCAGGAGCGCGCCATGGCGGCGTCGCGCGACGCCGCCGTCGTGTCCTTCATACAGAAGATCACCGGGCAGACCATCCCAATGCCGCCCATCATCGCCGCCCCCGCCATCACCGTCATGCCCCCACCGGCGCCATCCCAGCCGCCTCAGCCGCCGCCACCGCCGTCTCAACCCACCCCCATCACCTCCGTCGCGCCAGCTCCGCCGCCGCCGCCACCAGCAGCAGCAGCAGCAGCATCCCAGCCATCGCCGCAGGCCACCAAGTCGCCATTGCCGGCGACGCCGCAGACGCAAAGCAGCATGGACATTGTCATGACGGCCGCCGAGGCGCACGACGCGGGGTACGACGGGTCCGGCGGCGGCGGGGGGCAGCCGTCGTCGTCGCGGTGGCCCAAGGCGGAGGTGCACGCGCTGATCCAGCTGCGGAGCAACCTGGACAACCGGTACCAGGAGGCCGGGCCGAAGGGCCCGCTGTGGGAGGAGATCTCCGCCGGCATGCGGCGGCTGGGCTACAGCCGGAGCTCCAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTCAAGGAGAGCAACAAGAAGCGCCCCGAGGACTCCAAGACCTGCCCCTACTTCCACCAGCTCGACGCCCTCTACCGCAACAAGGCGGCTCTCAACTCCTCCTCCTCCACCGCCGCCGCCGCCGCACCGGCCCTCCCGCCGCCGGAGCACGCGGAGCCGGCGGTGACAGTCGCCGCGCCGATCTCGCAGACACCGCCGCCGCCGCCACAGCCCGTGACGACGACCAAGAACGGCAACGGCACCAGCAGTACAAACGGCGAAGGAGGAGGAGGCGGCTCCGGGGGCATGCAAATGCAGGCGAGCAACGGCAGCGTCGTCGCCGGCAACAAGTTCTTCACCGGCGCGGCGGCGAAGAAGCCAGAGGACATTATGAAGGAGATGATGGAGCAGAGGCCGCAGCAGCCGGCGGCGGCGAACAACGCCTTCAACCGAACGGACGGCGGCGGTGGCGGCGGCGGCGTGGACAGCGACAACATGGACGAGGACAACGAGGATGACTACGACGACGATGACGACGACGACGACGACGACGTCGACGGCAACAAGATGCAGTACGAGATCCAGTTCCAGCATCAGCACCACCACCAGCAGCCGCCGCAGCACCGCCACCAGCAGAGCGTCGTCAGACCGAACGCCGCCGCCTCCGCGGCCGCCGGCGGCAACCCGCCCGGCACCGCCGCCCCCGCCACGGCGGCGGCCGCAACGACGACCACCGGATCTTTCTTGGCAATGGTCCAGTGA
Protein Sequence:
- >OGLUM10G15720.1|Oryza_glumaepatula|Trihelix|OGLUM10G15720.1
MAIYYLEREGLTHNMPMHGHFYTPLPLNQRHADTTNAADMTRGPMRMWAPHVSGVSVSPDVLIIPSPPFPSGNTRGGGGGGGGSSMQQQQPGGGGGGVQQFGAVAPEMSPFSPAGGGGGGRISMAEAASPISSRPPPAQQQFDELGVGGGGGGGGGFDAEALAAAAVGEEGASGGAGGNRWPRQETLALLKIRSDMDAAFRDATLKGPLWEEVSRKLAEEGYRRSAKKCKEKFENVHKYYKRTKESRAGRNDGKTYRFFTQLEALHGTAAGVVAAPSPVTSLAPPPATAVGVSGGVRAPAEPPPAVVMGNVMSFSTSNTEEYSDEEDSDDEGTEDMGGGGGDERGKRKRLSEGGAAAGGGGGGGGGGGSGKMMRFFEGLMKQVMERQEAMQQRFLEAIEKREQDRMIREEAWRRQEMARLAREQEILAQERAMAASRDAAVVSFIQKITGQTIPMPPIIAAPAITVMPPPAPSQPPQPPPPPSQPTPITSVAPAPPPPPPAAAAAASQPSPQATKSPLPATPQTQSSMDIVMTAAEAHDAGYDGSGGGGGQPSSSRWPKAEVHALIQLRSNLDNRYQEAGPKGPLWEEISAGMRRLGYSRSSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRNKAALNSSSSTAAAAAPALPPPEHAEPAVTVAAPISQTPPPPPQPVTTTKNGNGTSSTNGEGGGGGSGGMQMQASNGSVVAGNKFFTGAAAKKPEDIMKEMMEQRPQQPAAANNAFNRTDGGGGGGGVDSDNMDEDNEDDYDDDDDDDDDDVDGNKMQYEIQFQHQHHHQQPPQHRHQQSVVRPNAAASAAAGGNPPGTAAPATAAAATTTTGSFLAMVQ