Information report for mrna13363.1-v1.0-hybrid
Gene Details
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Functional Annotation
- Refseq: XP_011470421.1 — PREDICTED: uncharacterized protein LOC101303380 isoform X1
- Refseq: XP_011470422.1 — PREDICTED: uncharacterized protein LOC101303380 isoform X2
- TrEMBL: A0A2P6SMQ8 — A0A2P6SMQ8_ROSCH; Uncharacterized protein
- STRING: XP_004309245.1 — (Fragaria vesca)
- GO:0006468 — Biological Process — protein phosphorylation
- GO:0004672 — Molecular Function — protein kinase activity
- GO:0005524 — Molecular Function — ATP binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >mrna13363.1-v1.0-hybrid|Fragaria_vesca|Trihelix|mrna13363.1-v1.0-hybrid
ATGGGTGAAACCAAAGGAGATAACCCCAACATACAGCACCAACAACCACAACAAACTCAGCAGCACCAGCAAATTTCAACCTCTCCAAATGATCCTCTTGAAGAAGCATCACCGTTAACGGTAGCTGTGACCGGAGCTACTGCTCCCTTTAACATTCCTGCTCCATTGTATGTTCCAATCAGTGGTGCAACATCTTCTTCATTGCCTTTTGATCAATCACAATTTGAGGCCGTGAATCCCAAGAGACCTAGATACACCAGTACTGGGCAATGGAAGCTTCTACCATCCCCATCTTCCCAACAAAAACAGACTCCTACCCAAACTACCGGAGCTTCTTCCTCCGATACAGCCTCATCCCCACCTCACTCTCCTCTCCCGTCTCTCTCCGCAACCTCAGGCCAAGACACAACGAAAACAGAAGGAGAAGAACAAAACCCATCTCTTCACCGCAGTCAGTTCCGAAGAGGCAAGTATGTCAGTCCGGTTTGGAAGCCCCACGAGATGTTGTGGCTAGCCAAGGCTTGGAGGGCTGTTTATCAAAGCCAAGGCTCAGAACACCACTCAGATATCACTGGTCAACCCACCAGAGCCAAAACAAGGGCTGATAAGGACAGGGAAGTTGCCGAGTTTCTTCAGAAGAATGGGATCAACCGAGACGCGAAAACAGCCGGTACGAAATGGGATAACATGCTGGGAGAGTTTCGAAAAGTCTATGAGTGGGAAAGAGGAGCTGATAGAGAACAAGTTGGGAACAAGAGCTATTTCAGGCTTTCTCCTTACGAGAGGAAGCTTCACAGATTGCCTGCTTCTTTTGACGAAGAGGTATTTGATGAGCTCGCACAGTTTATGGGGTCTAGAATGAGGACTCCTCCGATCAGCAGAGCTGCTGATAGCACACGGTCACAATCTCTTTATGTCACCACAAGTAGTGTTTTGCCACAACCACCTTCTTTCAGAGAAGAAGACCTCCCTAACTCAGGTAGGGCAAGGCAGCTAATGATCATGACCGGTGGTGGGGAAGGACCTTTTTACCCCAGATCGGGAAGCTTGTTAGGGTTTGATCATCTACCTCACTATCATCACCAGTCTTCACTAGACTACGTTGCAGGTGTCTCTTCATCGACGTCTTTGACGAAGGAGCTTCGTCGAATTGGGAAGATTCGGATGACATGGGAAGAATCTGTTAGTTTGTGGGGTGAAGAAGGTGAGCACCACCGTGGGAGGATCAAGATTCAAGGCGGCTCAAGCTTCTTGAATGCGGACGAGCTTGCTTACTTTGACGATTCCCTGGTCGCCTGCACCATGGAAGCTTTCGAAGATGGCCCTTTTAGAGGTTTCTCTGTTGATCGTTTTGTGTCTGGTCAACAAGTCAAGGTCTTTGGCAGACGAAAGCCATCTACTCCAGGACCTGGTTTAACGGTTGCAGCAATGCCTCCATGGGAGTTTCAAGACCCAAGTGAATACTACATCACTTGTCTTCGAGTTCCACCCCAATCGCTTCCACGCTTATCGGACCTTTCAAGCTACTTGCTACAGCCACCGCCTGAGGAGTTCCGATTTCCACTCCGGAAAGACGTTTACCGGGACTTGCCACCGGGGAGAGAGAGTTTCTTCACTACATCAAATGATTTGCTGGATTGTAGAGCCATCACGTACGATATTGTAAGCACCATTATTCGAAGCAACTATGGTATTGGTGCTACCACTAGTAGGGACTCCTTCATTGGCCTTTGGGATGACTGCATCAATAGGTTCGTCTCCAAGTTTTGTTGTGTCGACATGGTCTTCGTTCGAAAGGCTACATCTTCAATATCAACAACTGAAGCTTTGCAAGACCAATGGCCAAATGTGACGGGGTTTGTGAAAAACTTTTGTTTGTGGAGAGGGGAAGAGACAGATCAAGTTAGAGAAGGTCACATTCATCCTTCCAAATCATTAGTGGAGAAACTTCAATGGACGTATACCGATCTTCCTTATATTTTCGGGTACTATTCTATAGGTAGTTTGGTCACATTCTGTGCTCTAAGTAAAGGAGGACAAGATCAAGTTATTCAGACTAACTTACAGACGCTTGATCAATCTTTGCCGTCGGATAGACTGAAAGCCCTAGTCCTGTGTTACAGAGTTGCTGGATTATTGCCCTTGCTAGCTGATAGATGCTTAAACATGATCCACAGCGGGACTACTAGTACTAGCAACGGGGGTGCTCCAAGTTACAAGTTTATGCTACTTCCTTACAGTGATTTTGAGAGGGTTGATTTGCGTAACGGGAATATTGTTGAGCTGACCCCAAATACAGTGACCAGATTTTTCTCCAACCAAAGAAAGTGGTCAGCGGTCAAAGAAATCTACGACTTCCTTGATCACAGAATACCCCATGCAGAGTGTATTCACAGGTCGTCGGAGAAAGACTTGGCCTTGGTTTTCAAGCCAAGAGGGTGCAAATTCAAGCCAAGAAACTGCGACGAGCTCGTGGAGGCGCTCAAGTACGTGACCAAAGCTCTGGTGGCACTGCACGACTTGTCGTTCATGCACAGGGACATAGGGTGGGACAAAGTGATGAGGAGCACGGAGAGGGACAACGAGTGGCTCCTTTGTGGGTTCGACGAGGCAGTTGGTGCACCACAGCTGAATCCGTACTCGGTTGCTGCGGCGGAGCGTGGCGAACACGCGCCGGAGCTGGAGAGGGCGTTGCATGGGGTGAAAGTGGACGTGTGGGGTGTGGGACACCTGGTGAGGAGTTGTGGGTTGGCAGGTGTGCCAAAGATGCTGAGGGAGCTCCAGAATCGGTGTTTGGAACAAAACCCAGAGCTTAGGCCAACTGCGGCCGAATGCTACCACCACCTGCTTCAGCTCCAGTCGTCACTGTCGGTTGTCACCGCCATGATGTGA
Protein Sequence:
- >mrna13363.1-v1.0-hybrid|Fragaria_vesca|Trihelix|mrna13363.1-v1.0-hybrid
MGETKGDNPNIQHQQPQQTQQHQQISTSPNDPLEEASPLTVAVTGATAPFNIPAPLYVPISGATSSSLPFDQSQFEAVNPKRPRYTSTGQWKLLPSPSSQQKQTPTQTTGASSSDTASSPPHSPLPSLSATSGQDTTKTEGEEQNPSLHRSQFRRGKYVSPVWKPHEMLWLAKAWRAVYQSQGSEHHSDITGQPTRAKTRADKDREVAEFLQKNGINRDAKTAGTKWDNMLGEFRKVYEWERGADREQVGNKSYFRLSPYERKLHRLPASFDEEVFDELAQFMGSRMRTPPISRAADSTRSQSLYVTTSSVLPQPPSFREEDLPNSGRARQLMIMTGGGEGPFYPRSGSLLGFDHLPHYHHQSSLDYVAGVSSSTSLTKELRRIGKIRMTWEESVSLWGEEGEHHRGRIKIQGGSSFLNADELAYFDDSLVACTMEAFEDGPFRGFSVDRFVSGQQVKVFGRRKPSTPGPGLTVAAMPPWEFQDPSEYYITCLRVPPQSLPRLSDLSSYLLQPPPEEFRFPLRKDVYRDLPPGRESFFTTSNDLLDCRAITYDIVSTIIRSNYGIGATTSRDSFIGLWDDCINRFVSKFCCVDMVFVRKATSSISTTEALQDQWPNVTGFVKNFCLWRGEETDQVREGHIHPSKSLVEKLQWTYTDLPYIFGYYSIGSLVTFCALSKGGQDQVIQTNLQTLDQSLPSDRLKALVLCYRVAGLLPLLADRCLNMIHSGTTSTSNGGAPSYKFMLLPYSDFERVDLRNGNIVELTPNTVTRFFSNQRKWSAVKEIYDFLDHRIPHAECIHRSSEKDLALVFKPRGCKFKPRNCDELVEALKYVTKALVALHDLSFMHRDIGWDKVMRSTERDNEWLLCGFDEAVGAPQLNPYSVAAAERGEHAPELERALHGVKVDVWGVGHLVRSCGLAGVPKMLRELQNRCLEQNPELRPTAAECYHHLLQLQSSLSVVTAMM*