Information report for MELO3C009440P1
Gene Details
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Functional Annotation
- Refseq: XP_008442805.1 — PREDICTED: trihelix transcription factor PTL
- Swissprot: Q9LZS0 — PTL_ARATH; Trihelix transcription factor PTL
- TrEMBL: A0A1S3B7C3 — A0A1S3B7C3_CUCME; trihelix transcription factor PTL
- STRING: XP_008442805.1 — (Cucumis melo)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009909 — Biological Process — regulation of flower development
- GO:0010200 — Biological Process — response to chitin
- GO:0046621 — Biological Process — negative regulation of organ growth
- GO:0048442 — Biological Process — sepal development
- GO:0048498 — Biological Process — establishment of petal orientation
- GO:0090428 — Biological Process — perianth development
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0042803 — Molecular Function — protein homodimerization activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Cajanus cajan: C.cajan_06286, C.cajan_10032
- Citrullus lanatus: Cla017721
- Cucumis sativus: Cucsa.378480.1
- Glycine max: Glyma.19G192300.1.p, Glyma.03G191700.1.p, Glyma.10G066800.3.p, Glyma.10G066800.2.p, Glyma.10G066800.1.p
- Lotus japonicus: Lj1g3v4697600.1
- Manihot esculenta: Manes.08G021500.1.p, Manes.07G000300.1.p
- Prunus mume: XP_008241284.1
- Prunus persica: Prupe.7G116400.1.p
- Pyrus bretschneideri: Pbr016796.1
- Ricinus communis: 29092.m000461
- Vitis vinifera: GSVIVT01033792001
- Ziziphus jujuba: XP_015901979.1
Sequences
CDS Sequence:
- >MELO3C009440P1|Cucumis_melo|Trihelix|MELO3C009440P1
ATGGATGATCAATATCCCCTCTCCGATCTCCGCCACCTCTTGAGTACGGCTCCACCTCGTCCCCATTTCCCTTCTTCTTCCTCAATTCCCCACCATGATCTCTCCTCCGCCTTTCGCCACCACCATACTCCCTACGACCTCATCATGATGATGCCACGCGACACTCCCCTCCCCGACTTTCGTTCCGATTCCACCACTACACCATCTGCTCCCATAGTCTCAGCTCAGACCGTTCACAACGCTTTCGAGCCCGAAAGCGCCTCGATCGCTGCCGACTGCGCCACAGCTCGATGGCCTCGACAAGAAACCCTTACTCTCTTGGAAATTAGATCTCGACTTGATTCTAAGTTCAAAGAAGCTAACCAAAAAGGCCCCCTTTGGGATGAAGTTTCTAGAATTATGGCTGAGGAACACAATTATCAAAGAAGTGGGAAAAAATGCAGAGAAAAGTTTGAGAATTTATATAAATATTACAAAAAAACAAAGGAAGGCAAAGCTGGAAGACAAGATGGTAAGAATTACAGATTCTTTAGGCAATTGGAAGCTCTCTATGGTGAAACAAGCAATTCTCCTTCACTTCCAGATTCCCATTTTGTTGGAGACACAAATCTCAGATTCCAACAAAATGGGACCAAAAATCCAACCGCCTCCGCTCCGATGAGCCACGAAGCTCACCAGAAGCATTACTGCGACAGCCTTAGCCTCTCCAACACGTCCGAGTTTGAAACCTCGGCTTCATCAGATGGCAATGACGACCTCGGCTCGGTTGGCGTAATGGATAACGATTCAATGGAGAAAAGAAGGAAGAAGCGAGGCGGAAAATGCTGGAAGGCAAAAATTAAACAGTTCATCGACTCGCAAATGAGGAAGTTAATTGATAAACAAGAGGCTTGGCTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAAAAGGAGAGAATGATTCGGGACGAGGAATGGAGAAGACAAGAAGTGTCAAGAATGGATAGGGAGAGAAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAATCTAGAGATGCGGCATTAATGGATGCATTACAAAGGCTAACAGGAAGAGAATTGAGAGATAATAATCAATACAACTCCTCGCCTGACCACGGATTAATTGTAGCCGAGCATCATCGAAACAATAACGAGAATCAAAACGAAGACGGGAGCGAAATACTAAACAACAACACAGCTAGAGAATTATTAGCAGACAACAACGATAATTACCAAAGGAAAATAATTGATAATCATGGCAACAAGAAACGCAAGGAGAATTCAACATCAACAACAACCACCACCTACAATCTTTACTTCCAACAACAAACAGATTCCTCCCTCTATAGCCGTGGCGGCGGTGGACCGTACGACGGTGCCACTCACATCAAAGAACAAAGTCCAAATAGTTCGAATGCGGGTGCCAGCGGTGGCGGCCACGTGGTGCAAGATAACTGCTTTAGGTTCTTGATGGGTGAAGGAGATCAATCTCAATCTGGTTTGTGGGAAAATTTTGGTCTCAAACTCAACAATGGAGGTGACCGAACTTGA
Protein Sequence:
- >MELO3C009440P1|Cucumis_melo|Trihelix|MELO3C009440P1
MDDQYPLSDLRHLLSTAPPRPHFPSSSSIPHHDLSSAFRHHHTPYDLIMMMPRDTPLPDFRSDSTTTPSAPIVSAQTVHNAFEPESASIAADCATARWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETSNSPSLPDSHFVGDTNLRFQQNGTKNPTASAPMSHEAHQKHYCDSLSLSNTSEFETSASSDGNDDLGSVGVMDNDSMEKRRKKRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKERMIRDEEWRRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGRELRDNNQYNSSPDHGLIVAEHHRNNNENQNEDGSEILNNNTARELLADNNDNYQRKIIDNHGNKKRKENSTSTTTTTYNLYFQQQTDSSLYSRGGGGPYDGATHIKEQSPNSSNAGASGGGHVVQDNCFRFLMGEGDQSQSGLWENFGLKLNNGGDRT*