Information report for Medtr2g092960.1
Gene Details
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Functional Annotation
- Refseq: XP_024632484.1 — uncharacterized protein LOC11413989 isoform X1
- TrEMBL: G7IU29 — G7IU29_MEDTR; Myb/SANT-like DNA-binding domain protein
- STRING: AES67379 — (Medicago truncatula)
- GO:0006508 — Biological Process — proteolysis
- GO:0003677 — Molecular Function — DNA binding
- GO:0008234 — Molecular Function — cysteine-type peptidase activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Medtr2g092960.1|Medicago_truncatula|Trihelix|Medtr2g092960.1
ATGAAACGAATTCACACCGCTAACCGATTTGAAAAGCACAAACCCCAAGAAAAACAAACAACACCACCACAAATCATGAAGTTCGTCACTGAAGCTCAACCATCTCCGTCTTCGTCCGCCGTACTCGAAGACGGTTGGTCCAACGATGCCACATTCACACTCATCGATGCATGGGGCAAACTTTCCAAAACGCTTAACCGAAAATATTTGCGTCAGTATCACTGGAAAGAGATAGCAAAAACCATCAATGACCATCACGGTTACTCTAGAAAAGAGCGACGCACTTACGTTCATTGCAAAAATCGATTCGAAGCGCTTAAGAAGAAGTACGCGATTGAAAAAGCTAGGGTTTCGGAAAACGAGCTTTACGATGATGAATGGTTGTTTTTCGAGAAACTTGATTCAGTACTTGGAGATGGTTTACCGGCCAAGAATGTCTCGCCTCCTGTTGAACCTACGGCGGATGTTCCGGCATGGGCGCTGGCACCGGTAGGTCGTAGATCAGGTGCTCAGAACACTGAGAAACAACCTGTGCAGGTGAGAATGTCGTCGGAGAGTGAGGAGGAGGGGTCACGTTTTCGCCGGAATGTAGCATCTCAGAAAAGTTTGGCGCCGATGACAATGACATCGTCTCCGGAGAGTGTGGAGGAGTCACGTTCTCTCCGGAGTTTATCTGCTCAGAAACGATTGTCGCCGGTGATAACAACATCGTCTCTGGAGAGCGCGGGGGACTTACGTTTTCGGAGAAATTTATCTGCTTTTGCTGCAGCTGCTGCTGCAGCAGCTGAAGTGGAGGTCGATAATTCGGATTCCTATAATTCGGATTCCGATGATTCAGATTTCAATTACGAAGGATATGATTCAGAGGTAAGCAATGAGAGCAAGAAAAGGAAGAGAGGAAGAAGGGATGTGGAATTAGGGCACAGAGAGGTTGCAGGAAGAAAGGATAGGGAATTAGGGTATAGAGAGGTTACAAATGCTATGGAGAAGCTTGGTGAAGTACATGAAAGAGTGGAATCGTCGAAGCAGCGAAAAAATGTGGATTTGGAGAAGCAGAAAATGCAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAAGGTGCAATTTTCAGAAGGTTCTCAGAGAATGGAATTTTTAAAGGATGCTCAGACTCGGTGGATGCAATTTTTAGAGGATCAGACTCAGAGGATACAATCTTCAGAGGGTTCTCAGAGGATGCAATTTTCAAGGGATTCTCAGACTCAGAGGGTGCAATATCCAGAGGATTCTCTGAGAATGCAATTTTCAAAGGATTCTCAGACTCAGAGGATGCAATTTCCAGAGGATTCTCAGAGGTGGAGGGTGCAATATCCAAAGGATTCTCCGAGAATGCAATTTTCAAAGGATTCTCAGACTCAGAGGATGCAATTTCCAGAGGATTCTCAGAGGTCGAGGGTGCAATATCCAAAGGATTCTCAGACTCAGAGGATGCAATTTCCAGAGGATTCTCAGAGGATGCAATTTTCAAAGGATTCTCAGAGAATGCAGCAGCAGAAAACCAACAACTCAAAACACATGGATGATGTATCAGCTCCTTCCCGAAGCAGGTTAGATTCTCAGTCTACCAAAAAGAAAGTTAGAGGTCCCACACTGATGAAGAAGTTAGCAGACCGTGCTGATGGACAGAGGATACCGATTGAATTTGATCAATCAACTGGGAAATCGATAGGGGAAAACAAGACAAAGTTCAAGAGTTATTTGGGTTTCCTTGGTCGAAGCAAAATCAGTATTTTGATAGAAGATTGGGATTCCGTAGATGCGAATGTGAAGGATGAAATTTGGACAGAGATCCTGAAAATATGGGATGTTCCTAATTCTGGCTTCTTACGAAAGAAATGGATTGCATATGTGGGCGAGCGTTGGAGGGCATTTAAGACTAATTTGACTTCTAGATATATACATGGGGATCTTAGGGGACAATCGCCTCTCGAGGCCTATAATTTTCTTGATGAGGAAACATGGCAAGCGTTTGTTCAGATGCGACTGGACCCTGCCTTTCAGGAGATAAGAAAGAAAGCTCAAATGAGTTCGGCTCATCATACAACCCCTCACAGATTGTCTCGTGGGGGATATGAGTTGCTCCAAGAGAAGATAATGCAAGAGAAGTTAAAACAAAAGCAAGGTTCATTAGGTGATTCGGTAGCTGCACCTCCGTCTCCACCAGCACGTCATGAGCAATGGAAGAGAGCCCGACAAAAGCCATCAGGAGATTACACATCAGAGGACTCACGCATTATTGCGGAGAAAATTGATTCTCTGGTCGAAAAAACAGCTCAAGGAACTTTTGTTCCACAAGGACGTAAAGATATTTTGGCAGAAGCCATTGGCAAACCTGAGCACTCTGGTTTTGTTCGTGGTGTTGGTCGAGGTGTGGGTATTCGGCAATACTTTGGACCACTTGAACGTGACTCCACCCCACCTGTTTTTAGTAGCGAACAATTAAGGACCATAAAAGTGGAGCTTACTCAGCAAATTAAAGAGGAATTGATGCAGGATCTGGAAGCTATGGGTTTTTCTAAAAAACCCTCGAATTTCCCAACTCACTCTCCTAATACCGTTGTACCTGCGAGCACAAAAGGTAGTTCTTCCGATGTGCCTCCTATACCAGAGGAGGATGAAATCCCAGAACGATGTGAATTGTACGTTGATGATTTGCTTCATGCAGTGGCCTATGGCAATATTTACAAGTTGGGGCCTACCATACATAATCAGATACTAGAAAATGATATGGTGAGGGTGGTTGTTAGTGAGGTGTTAGATGCTAACGCTCAAGTGCCTATGCCCACTGATGAGGTGGAAACGGTTGGGCAGGCCCTCAACAATTTCGTTCAATGGCCAAAAAGACTAGTGGAGATTGTTTCTGATAAGGATGTTGATGGATATGAAAAAGATGATGTTTCACCCAAAAGGTCGGACCCTCAACTAGATTCTGTTCAACAATTGGTTTTAAAGGCGATGTGTATGTCAGAATCTATAAAGCTTGAGTTGGAACACGATAAAATGAAGTCTCTTTGGCTCTCACAGAGAGATATTATGGAGTTGTGTATGGGTAAACAAGAGTTATCCATAACTATTCTACGATTGTGGTTAACGTATTTGAATCGCCTCTCAATTAATGTGGGTAAGAGTGACTTATATGGATTTATTGATCCATGTTTCATTCAAAGTCAACATGATCCAAGTAATGCTGAAGCCTACATACAAAATAAGTTATGCGATGATAAAAAAGAGTGTTACCTAGCACCTTATTATAATAATCGTCATTGGCAATTGCTCATTATTTGTCCTAAGAAGAATAATGTAGTATTCCTATGTTCGCTGGAAAGAAAGCCAGATAAAAATATTATTCAAACTGTTGATTCAGCTTTGGATGAATATCATAAGCTGCAAGGTGTTCAAAAGAAGAAGCCAACATGGATTGTCCCTGTTTGTCAAAGACAACCTGAGAGTTATGAGTGCGGCTACTATATTATGATACATATGTTGAAAATTGTATCTGATGGGATTATTGATTCATGGAAGAAGATATTTGGAAATCCTGAGCCATTCGATGAGGATGAACTTATAAACGTCCGACAACGTTGTGCAAGTTTGATTCTTGAATTTATTCAAGGAACTAAAAATGTTTGA
Protein Sequence:
- >Medtr2g092960.1|Medicago_truncatula|Trihelix|Medtr2g092960.1
MKRIHTANRFEKHKPQEKQTTPPQIMKFVTEAQPSPSSSAVLEDGWSNDATFTLIDAWGKLSKTLNRKYLRQYHWKEIAKTINDHHGYSRKERRTYVHCKNRFEALKKKYAIEKARVSENELYDDEWLFFEKLDSVLGDGLPAKNVSPPVEPTADVPAWALAPVGRRSGAQNTEKQPVQVRMSSESEEEGSRFRRNVASQKSLAPMTMTSSPESVEESRSLRSLSAQKRLSPVITTSSLESAGDLRFRRNLSAFAAAAAAAAEVEVDNSDSYNSDSDDSDFNYEGYDSEVSNESKKRKRGRRDVELGHREVAGRKDRELGYREVTNAMEKLGEVHERVESSKQRKNVDLEKQKMQKQKMQFSKDSQKVQFSEGSQRMEFLKDAQTRWMQFLEDQTQRIQSSEGSQRMQFSRDSQTQRVQYPEDSLRMQFSKDSQTQRMQFPEDSQRWRVQYPKDSPRMQFSKDSQTQRMQFPEDSQRSRVQYPKDSQTQRMQFPEDSQRMQFSKDSQRMQQQKTNNSKHMDDVSAPSRSRLDSQSTKKKVRGPTLMKKLADRADGQRIPIEFDQSTGKSIGENKTKFKSYLGFLGRSKISILIEDWDSVDANVKDEIWTEILKIWDVPNSGFLRKKWIAYVGERWRAFKTNLTSRYIHGDLRGQSPLEAYNFLDEETWQAFVQMRLDPAFQEIRKKAQMSSAHHTTPHRLSRGGYELLQEKIMQEKLKQKQGSLGDSVAAPPSPPARHEQWKRARQKPSGDYTSEDSRIIAEKIDSLVEKTAQGTFVPQGRKDILAEAIGKPEHSGFVRGVGRGVGIRQYFGPLERDSTPPVFSSEQLRTIKVELTQQIKEELMQDLEAMGFSKKPSNFPTHSPNTVVPASTKGSSSDVPPIPEEDEIPERCELYVDDLLHAVAYGNIYKLGPTIHNQILENDMVRVVVSEVLDANAQVPMPTDEVETVGQALNNFVQWPKRLVEIVSDKDVDGYEKDDVSPKRSDPQLDSVQQLVLKAMCMSESIKLELEHDKMKSLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINVGKSDLYGFIDPCFIQSQHDPSNAEAYIQNKLCDDKKECYLAPYYNNRHWQLLIICPKKNNVVFLCSLERKPDKNIIQTVDSALDEYHKLQGVQKKKPTWIVPVCQRQPESYECGYYIMIHMLKIVSDGIIDSWKKIFGNPEPFDEDELINVRQRCASLILEFIQGTKNV*