Information report for MDP0000574910
Gene Details
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Functional Annotation
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Actinidia chinensis: Achn365031
- Fragaria vesca: mrna06360.1-v1.0-hybrid
- Glycine max: Glyma.04G194600.1.p
- Gossypium hirsutum: Gh_A03G0459
- Lotus japonicus: Lj0g3v0261399.2, Lj0g3v0261399.1
- Medicago truncatula: Medtr3g089020.1
- Prunus mume: XP_016651116.1, XP_016651115.1, XP_008239449.1
- Prunus persica: Prupe.5G152800.2.p, Prupe.5G152800.1.p, Prupe.5G152800.3.p
- Pyrus bretschneideri: Pbr036910.1, Pbr017747.1, Pbr017741.1, Pbr041014.1
- Ricinus communis: 30147.m014528
- Solanum tuberosum: PGSC0003DMP400026735
- Ziziphus jujuba: XP_015866975.1, XP_015881808.1
Sequences
CDS Sequence:
- >MDP0000574910|Malus_domestica|Trihelix|MDP0000574910
ATGGAAGTTTTACGCCCTCAAAAYGTAAATGGTTCGACTGAAAATAGCATAAAAGGGAAGATAAAAATTACTACTCGATGTTTATGGCTTGACAAAGGAAAGCTTATTGATGCACTCTACAAAGCTGCCCATKCTGCACTATCAAGCTGCCCCATAAGTTGTCCTCTTCCTCACATGGAAAGAACAGTGTCTGAGGTATTGAGGAAATTGGTAAGAAAGTACAGTGGTAAAAGGCCAGACGTCATTGCCATTGCCATGGAGAACCCTGCAGCAGTTCATGCTGATGAGGTCAGTGCAAGACTATCTGGAAAATCTTATGTTGGTTCAGAGGTGTCACAGTTGAGGAAAGTATATGATCAACATCAAATTAAGAGTCCGTCAACTAGGACACAAGCAGATGATTGCAAGGCCAAAACACATTTTCCGAGTCAGTCAACTACAACACAAGCAGATGAAGGCAAGGACAACACATTGCAGAGCTTCTCTCAACAAGATACTGAAGAGTCCGTACTTGAAGATGATGGCATTGAAGTCGAAGGACTCCTGCCTGAGGAAGATTCTGCCACTTCAAGTTCCAAGCCAGAGAAGCTTTCTTCTGATTCAGAGGATTTTTTGAACGCAATGGTTAGRTTATCAACTGGTGACAAATCAGTAGAAGATGAAAATGGTCTGGTTGCAGAACAGGAAAATCCACAGAAAGATGGTCCTGAAAGCAGTGAAATACCAAATCTTTCAAAGCCCGTGAAGCGCAATAAATGGAAGACTGACGAAGTTCAGAAGCTTATTACAATGCGSGGGAAACTGCGTAGCAGATTTCAAGTTGTGAAGGGTAGAATGGCCCTCTGGGAAGAGATATCTAGRAACTTGTTGGCCGATGGGATCAACCGAAGCCCAGGACAATGCAAATCTCTGTGGGCATCCCTGGTTCAGAAATATGAGCYCGAGGAAGATGCAGCTGGGTTTGAGGTAGAGGAGGAGGAGGAGGAGGAAAAGGCAACAGGAGAGAGGGAGGGTAACGAAGCTACGGGAGAGGGAGGCTGCGGGAGAGACAGAGAGGGTAGACAGTGGAATTTTTGTGTTCCACATATGTGGAACAACCCGTTCCAGGGGGGAAGGCGGGACGCAAAAACACCAAATTTCTGTCTCGTGGAACAGCGCATTCCACTCATTTTTGGCGTACCAAACGTGGGACGGAACATCTCATCCCGTTCCGTCCCGTCCCATGTTTCTTCTTTGGCTAATCACTTGAGAAATAGAACCTCAAAGAGCATAACTGATTTTGATACACCACGCTCTGCTTTCCTGGACCGTTCTTCCTCCTCCAATTCCCGGAGAAGTTCTGGTAATGGTTCTGCAAAGCATGCTTACAGTAGTTTTAACAGAAGCCACCGTGATAAGGACCGTGAGAAGGAAAAAGAGAGATCAAATTTTGGAGACCATTGGGACCGTGACTCTTCTGACCCTCTAGGAAACATTTTTACCAGTAGGGTTGAGAAGGATACATTGCGACGCTCTCAGTCTATGGTGTCCAGRAAGCAGACTGAGCYTTTGCCCCGAAGAGCTGCTATYGACTCAAAAAGTTCTGGTAATAGCAATCATCACAATGGCAATGGTTTGCTTTCTGGTGTTGGAGTTGGTATTCAAAAGGTTGTGTTTGATAAGGATTTTCCCTCACTTGGAACTGAAGAAAGGCCAGCTGCACCTGATATTGGAAGAGTTCCATCTCCTGGATTTAKCACAGCTGTTCAAAGCTTGCCTTTCAGCTTTAATTGGTGGGGAGGGATGACCTCAGCTCTGGCTGATTYCCCTTCTACTATCATTGGGAGCAGTAGCTCAGGATCCTTTCCTGTTCAACCAACTGTTGCTGCTACTTCAAGTTCTGGGGCTTCAACTGCAATGTCTGGTCTTAACATGGCTGAAGCATTGTCACAAGTTCCAGCAAAAGCTCGCACTGTTCCTCAGTTGTCTATCAAGACACAGAGGCTTGAGGAATTGGCAATCAAGCAATCAAGGCAATTAATTCCAGTGACACCTTCAATGCCCAAACCTTCTGTAAGTAAATTCCACTGA
Protein Sequence:
- >MDP0000574910|Malus_domestica|Trihelix|MDP0000574910
MEVLRPQNVNGSTENSIKGKIKITTRCLWLDKGKLIDALYKAAHXALSSCPISCPLPHMERTVSEVLRKLVRKYSGKRPDVIAIAMENPAAVHADEVSARLSGKSYVGSEVSQLRKVYDQHQIKSPSTRTQADDCKAKTHFPSQSTTTQADEGKDNTLQSFSQQDTEESVLEDDGIEVEGLLPEEDSATSSSKPEKLSSDSEDFLNAMVRLSTGDKSVEDENGLVAEQENPQKDGPESSEIPNLSKPVKRNKWKTDEVQKLITMRGKLRSRFQVVKGRMALWEEISRNLLADGINRSPGQCKSLWASLVQKYEXEEDAAGFEVEEEEEEEKATGEREGNEATGEGGCGRDREGRQWNFCVPHMWNNPFQGGRRDAKTPNFCLVEQRIPLIFGVPNVGRNISSRSVPSHVSSLANHLRNRTSKSITDFDTPRSAFLDRSSSSNSRRSSGNGSAKHAYSSFNRSHRDKDREKEKERSNFGDHWDRDSSDPLGNIFTSRVEKDTLRRSQSMVSRKQTEXLPRRAAIDSKSSGNSNHHNGNGLLSGVGVGIQKVVFDKDFPSLGTEERPAAPDIGRVPSPGFXTAVQSLPFSFNWWGGMTSALADXPSTIIGSSSSGSFPVQPTVAATSSSGASTAMSGLNMAEALSQVPAKARTVPQLSIKTQRLEELAIKQSRQLIPVTPSMPKPSVSKFH*