Information report for MDP0000276590
Gene Details
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Functional Annotation
- Refseq: XP_028955898.1 — uncharacterized protein LOC114823983
- TrEMBL: A0A498KCL9 — A0A498KCL9_MALDO; Uncharacterized protein
- STRING: XP_009375065.1 — (Pyrus x bretschneideri)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Cicer arietinum: XP_004486956.1
- Fragaria vesca: mrna15271.1-v1.0-hybrid
- Juglans regia: WALNUT_00013184-RA
- Lotus japonicus: Lj1g3v3331710.1, Lj1g3v3331700.1
- Manihot esculenta: Manes.14G001700.4.p, Manes.14G001700.3.p, Manes.14G001700.2.p, Manes.14G001700.1.p
- Populus trichocarpa: Potri.001G019200.1, Potri.003G204700.1
- Prunus mume: XP_008227154.1
- Prunus persica: Prupe.4G244300.1.p
- Pyrus bretschneideri: Pbr017838.1, Pbr025725.1
- Ricinus communis: 30169.m006420
- Ziziphus jujuba: XP_015875987.1, XP_015875986.1
Sequences
CDS Sequence:
- >MDP0000276590|Malus_domestica|Trihelix|MDP0000276590
ATGGATGGTTCAGAGTTGGGAGGTGGGTTTTTGTCTGGTCCTAGTGGGGGGATACTAGACCTYGAATCGCCGGTTCCTAGACGCCAAGAGATGCAGTTGGGTCATCAATTGTTAGGACATCAACAACATCACATGAATGTGATGGGGGGCGTTGCAGGCGATCGCCATCCCATTGGGCTTGTGGAAGTGAAAGGGTCAATCCCAAAAGTTGGTTCGATTATTGGCAAAGGGAAGGTTGTTGCTTCCTTTAATGCCAATAACGGTTACAACTTAAGTGATGAAGATGAACAAAATTATACAGATGATGAGAGCATTGAGGGTGCCAAGGGCAAAAAGGGATGTCCGTGGCAGCGAATGAAGTGGACAGATAATGTGGTCAGGCTTCTTATAGATGTTGTTGCTTGCGTGGGTGATGATGGTTCGGTTGAAGGCGGTGAGGGGCTTAAGAGGAAATCTGGGATATTACAGAAGAAGGGTAAGTGGAAGACTGTGTCAAAACTAATGATTAGTAAAGGTTGTCATGTCTCTCCTCAGCAGTGTGAAGACAAGTTTAATGACTTGAACAAAAGGTAYAAGAGGTTGAACGATAWTCTCGGGAGAGGAACTAGTTGTAGAGTGGTAGAGAATCCTGCTCTTATGGATGCAATGCCCCACCTCTCTGCCAAGTTGAAGGATGACGTTAGGAAGATACTGAGCTCAAAACACTTGTTTTATAAAGAAATGTGTGCTTATCATAATGGACAGAGGACACCTGACTGCCAAGATCTCGATCACCATGGTTATTCTCTACCTCTTGGGAGGTGCTCGAAAGACGATAATGGATCCGCAGAAGAAGAAGCTGAAGAAAACCATGATAGTGAGGATGATGAATTAGACAATGAAGATGATAATGATGCCAATAACGATAGGGAGAGAATGAGAAAAATGGGTGAGATGAAGAGGGCTAGGGAAGAAGATGGCCATTTGTGGCCGCAATATGTTCTTCTCGATAGTTTTCAAGTTGAAATGGGTGAGATTTTTCAAGACCCAAYGAAGTCTTTATGGGAGCGAAGAGATTGGATCAAGAAACAGAAGCAGCAACTCCAAGAGCAAAGAGTCAGCTTCCAGGCTGAAGCTTTGGAGATTGAGAAGCAGAGGTATAAATGGCTAAGATATTGTAGCAAGAAAGACAGGGAACTGGAGAGGTTGAGACTAGAGAATGAGAGAATGAAATTAGAGAACGAGAGAAGGGTACTGCAACTGAGACAGAAGGAACTGGAAATAGATTTGAGGAGCGCTGGCTTCGGAGTAGTGATTCGAGATGAGTTGGGTATTTTCAGAGGAGGTGCTGCTATTGAAGGCTTGAATCTTGCTGCAAGTTTGGGGTTCTCCAACCTTATTACATGCTTGCACGGACCCTATTCCTTTATTGAGGTCGTAGATTTACGTCCTATTCGGCCTTTGGGGGCGCGTTGTGGAAGAACCACACCCGACCCGTTTCGGCCCAATATAGCAGAAATGAGAATTGGGGAGAAAGAAGGAGCCGAAAAAATGGCGGGGAAGAAAGGAGGCTCCAGGTTGAACGTTGCAATTATTCATCCCGATCGGGGCATCGGTGGAGCTGAAAAACTGATCGTCGACGCGGCTGTCGAACTTGCATCCCATGCTTCCGTTTCTGGTATCTTTCYAGTTACTGTATATTGTGCCTTCCTACCCCGACATATATTCTATCGACTCCATGCTTTGTGTGCATATATATGGTGCTTTGTTGCTCTCTGCATGCTGTTCATGTGGCCATTGTTTGATGTAATACTAGCAGATCAGGTTTCTGTTGTCATCCCACTGCTGAAGCTTAAGAAGGCAACAAAGGAATTTGCTCCTATTTCATGTGAATTGTTATCTGGAATGGCAGATAAGATTCTTGTTAACAGCAAACTCACAGCATCTATGTTTGCGAAGAAATTTAAGCATCTTGACGCACGAGGGATTGAGCCAGCTGTTCTTTATCCAGCTGTCAACGTGAATCAGTTTAATGAACCAGCCAATTCTTACAAGTAG
Protein Sequence:
- >MDP0000276590|Malus_domestica|Trihelix|MDP0000276590
MDGSELGGGFLSGPSGGILDLESPVPRRQEMQLGHQLLGHQQHHMNVMGGVAGDRHPIGLVEVKGSIPKVGSIIGKGKVVASFNANNGYNLSDEDEQNYTDDESIEGAKGKKGCPWQRMKWTDNVVRLLIDVVACVGDDGSVEGGEGLKRKSGILQKKGKWKTVSKLMISKGCHVSPQQCEDKFNDLNKRYKRLNDXLGRGTSCRVVENPALMDAMPHLSAKLKDDVRKILSSKHLFYKEMCAYHNGQRTPDCQDLDHHGYSLPLGRCSKDDNGSAEEEAEENHDSEDDELDNEDDNDANNDRERMRKMGEMKRAREEDGHLWPQYVLLDSFQVEMGEIFQDPXKSLWERRDWIKKQKQQLQEQRVSFQAEALEIEKQRYKWLRYCSKKDRELERLRLENERMKLENERRVLQLRQKELEIDLRSAGFGVVIRDELGIFRGGAAIEGLNLAASLGFSNLITCLHGPYSFIEVVDLRPIRPLGARCGRTTPDPFRPNIAEMRIGEKEGAEKMAGKKGGSRLNVAIIHPDRGIGGAEKLIVDAAVELASHASVSGIFXVTVYCAFLPRHIFYRLHALCAYIWCFVALCMLFMWPLFDVILADQVSVVIPLLKLKKATKEFAPISCELLSGMADKILVNSKLTASMFAKKFKHLDARGIEPAVLYPAVNVNQFNEPANSYK