Gene Details:

  • Gene ID: Lus10035570
  • Gene Family: Trihelix Family
  • Description: Trihelix Family protein
  • Species: Linum usitatissimum
  • Source: Trihelix family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_023526488.1  — trihelix transcription factor PTL
  • Swissprot:  Q9LZS0  — PTL_ARATH; Trihelix transcription factor PTL
  • TrEMBL:  A0A151U3D4  — A0A151U3D4_CAJCA; Uncharacterized protein
  • STRING:  Lus10035570  — (Linum usitatissimum)

Family Introduction:

  • GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

Sequences:

CDS Sequence:
  • >Lus10035570|Linum_usitatissimum|Trihelix|Lus10035570
    ATGGAAGACGGCCGCCAGCATCAGCAGTTCGCCGCCACCGGGGTAGATCTCCGCCACCTCATCAGATCAGCCACCACCACCGCCAACAACAGCAACAATAACAACCCTTTCCCTCCTCCGTCCCCAAGAAGGGCGAGGGGAGGGGGGTGGGGGTGGGAGGGGCTTTTTGGCGGCGGAGGAGGAGGCGGTGACGGCGGGAGGTGGCCGAGGCAAGAGACGCTGACGTTGCTGGAGATAAGATCCAGGCTGGATCCTAAGTTCAAGGAAGCCAACCAGAAAGGTCCCCTCTGGGACGAGGTTTCTAGGATACTATCTGAGGAGCATGGGTACCAAAGGAGTGGGAAGAAATGCAGGGAGAAGTTTGAGAATTTGTACAAGTACTACAAGAAGACCAAAGAAGGCAAAGCTGGGAGGCAAGATGGCAAGCATTACAGGTTCTTCAGGCAGCTTGAAGCTCTCTACGGCACCGAGTCGTCATCATCACTATCAACCATTAACAACAACATGCTCGTTCCGAATCCAACGGCCAATAATCCACTCCATCAAAACCAGCAAGACTCGTCCAATTTCATGATTGGAAACTCCTCAACTAGTGGTTTCCACCACCACCATCAGTTCCCTACTAACAACAATGTAACTCCCTCGTCGAACCAGGATGTCCACTTCTACTCCAGCCTCAGCATCTCCAACAACTCCTCCGAAATATTCGAGTCTTCCTCGTCCGAGGAAGCTGGTCAAGAGAATGATAATGATAACGATGACTTGATGACGAGGAGGAGAAGGAGGATGAGGAAGAGCGGTTGGAAGGGCATGATAAAGGAGTTCATCGATGCCCAGATGAGGAAGCTGATCGACAGGCAGGATGCGTGGCTCGAGAAGCTGACAAGGACACTGGAGAGCAAGGAGAAGGAGCGGTTGGTTAGGGAGGAAGAGTGGAGGAAGCAAGAGGCTTCGAGGGTCGAAAGGGAGCAGAAGTTTTGGGCAAATGAGAGGGCTTGGATCGAAGCTAGGGATAGTGCATTGATGGAAGCTTTAGGGAAGTTAAATGATAATAATAATGGAGGAGATCATCACCAACATCAACATCAAAATCAAGTGGTGAATGTGAATAGAAAGTGTTCTTCTTCATCTCATGACGAGGCTCATGATGATGAGAATAAGAGGAAAGAAGATCATCAGCTTGGTAACTATGGATTCCATGGTCAAGGGATGTACAATCCTGAAAGGTTGCGGATTCATGAGAACAATAATAATGGAGGGAGCAGTAGCAATAATAATAATGCTAACAATAATAATAGCAATGTGAGTGAGAGTTGTTTCAGGTTCTTGATGGGGGAAGGTGGGGAGAATAATCTGTGGGAGAATTATGGGTTGAAGCTTGCCAAAGGAGAGCATGGTAATGATCACCATGACCATCAAAACCAATGA
Protein Sequence:
  • >Lus10035570|Linum_usitatissimum|Trihelix|Lus10035570
    MEDGRQHQQFAATGVDLRHLIRSATTTANNSNNNNPFPPPSPRRARGGGWGWEGLFGGGGGGGDGGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRILSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGTESSSSLSTINNNMLVPNPTANNPLHQNQQDSSNFMIGNSSTSGFHHHHQFPTNNNVTPSSNQDVHFYSSLSISNNSSEIFESSSSEEAGQENDNDNDDLMTRRRRRMRKSGWKGMIKEFIDAQMRKLIDRQDAWLEKLTRTLESKEKERLVREEEWRKQEASRVEREQKFWANERAWIEARDSALMEALGKLNDNNNGGDHHQHQHQNQVVNVNRKCSSSSHDEAHDDENKRKEDHQLGNYGFHGQGMYNPERLRIHENNNNGGSSSNNNNANNNNSNVSESCFRFLMGEGGENNLWENYGLKLAKGEHGNDHHDHQNQ*