Gene Details:

• Gene ID: LOC_Os04g32590.1
• Gene Name: LOC4335704, Os04g0397500, OSJNBa0039C07.7
• Gene Family: Trihelix Family
• Description: Trihelix Family protein
• Species: Oryza sativa subsp. japonica
• Source: Trihelix family gene from PlantTFDB

Protein Features:

• Pfam:  PF13837
• PROSITE profile:  PS50090
• InterPro:  IPR017877

Annotation Proteins:

• Refseq:  XP_015636777.1  — trihelix transcription factor ASR3
• TrEMBL:  Q7XLG9  — Q7XLG9_ORYSJ; OSJNBa0039C07.7 protein
• STRING:  ONIVA04G08920.1  — (Oryza nivara)

Gene Ontology:

• GO:0045892  — Biological Process — negative regulation of transcription, DNA-templated
• GO:0050777  — Biological Process — negative regulation of immune response
• GO:0071219  — Biological Process — cellular response to molecule of bacterial origin
• GO:0005634  — Cellular Component — nucleus
• GO:0003677  — Molecular Function — DNA binding
• GO:0042803  — Molecular Function — protein homodimerization activity

Family Introduction:

• GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

• Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.   DOI:  10.1007/s00438-009-0507-x ;  PMID:  20039179

Sequences: