Gene Details:

  • Gene ID: Lj5g3v1950880.1
  • Gene Family: Trihelix Family
  • Description: Trihelix Family protein
  • Species: Lotus japonicus
  • Source: Trihelix family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_003536428.1  — uncharacterized protein LOC100812134
  • Refseq:  XP_028184280.1  — uncharacterized protein LOC114371077
  • TrEMBL:  A0A445IRA2  — A0A445IRA2_GLYSO; Uncharacterized protein
  • TrEMBL:  I1LDG7  — I1LDG7_SOYBN; Uncharacterized protein
  • STRING:  GLYMA10G36980.1  — (Glycine max)

Family Introduction:

  • GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

Sequences:

CDS Sequence:
  • >Lj5g3v1950880.1|Lotus_japonicus|Trihelix|Lj5g3v1950880.1
    ATGGAAGGGAATTTGTCACAGGGGGGAATAATTCAAGGTGGGAGTTCTTTTGGTGGTTTTGATTTGCCAGGATCAATTCAGGTTCATCATCATCAGGGACAGCATCCTCATGCCATGCAGCAACATCAGACTCATCCATGTCAAGGGTCTACTGTGCATGTGCATGATGGTTTTCCACGTACAATGGGAACCTTACAGAGCAGCTGTGATCCAACCCTTTCGATGTCGGACTTTGGTAAGGGGGAAAGAGGCAAAAACTCGACGAGTGAGGAAGATGAGCCGAGCTTTAATGAGGATGGTGTTGATGGTCACCATGAAGGGGTTAGAGGTAAAAAGGGATCGCCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTAAGGCTCCTGATAACGGCTGTTTCTTATATGGGTGAGGATATAACTTCCGAAGGTGGTGGTGGCGGTGGAAGAAGGAAATTTACAGTGCTACAGAAGAAGGGTAAGTGGAAATCTGTTTCCAAGGTCATGGCTGAAAGGGGTTATCGTGTTTCACCTCAGCAATGTGAGGATAAGTTCAATGATCTTAATAAAAGGTATAAAAAGCTTAATGATATGCTAGGGAGGGGTACTTCTTGTCAGGTTGTTGAGAATCCTGCGCTTTTGGATGTAATAGAGTTTCTTTCGGAGAAAGAAAAGGACGATGTTCGAAAAATATTGAGCTCGAAACACTTGTTCTATGAAGAGATGTGCTCTTACCATAATGGTAATAGATTGCATTTACCCCATGATCCTGCATTGCAACGTTCTCTGCAGATAGCTCTCCGAAATAGAGATGACCATGATAACGATGATATCAGAAGGTTCCATCATGATGGTCACGACGAAGATGAGCAAGATGTGGAAATGGATGATCATGATGATTTTAAAGAGAATTGTTCCTCCCATGGTGATAGTAGAGGAATGTATGGACCATTAGGCGGATCTATGAAGAAATTGAAACAGGTCCAAGTCCAGGAAGATGCTAATACATTTGGTAATTCTGTAAATGGTCAAGGCTACAACAAAAGTTCACATCCCCATGGACAGGTGGTCCATTCTGATGTTAATCAAGTTTTACCTGAAGGCATGAGAGCAGCTTGGTTACAAAAGCAATGGGTTGAATCTCGCTCACTTCAGTTAGAAGAGCAAAAGGTACAGCTTCAGGTTGAGATGTTGGAACTAGAGAAACAGAGACTCAAGTGGCAGAGGTTTAGCAAGAAAAAGGACCGCGAGTTGGAAAAGCTGAGTCTAGAAAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTGAAACGAAAAGAAATGGGCGCCGGCTTAAACTAG
Protein Sequence:
  • >Lj5g3v1950880.1|Lotus_japonicus|Trihelix|Lj5g3v1950880.1
    MEGNLSQGGIIQGGSSFGGFDLPGSIQVHHHQGQHPHAMQQHQTHPCQGSTVHVHDGFPRTMGTLQSSCDPTLSMSDFGKGERGKNSTSEEDEPSFNEDGVDGHHEGVRGKKGSPWQRVKWTDKMVRLLITAVSYMGEDITSEGGGGGGRRKFTVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPALLDVIEFLSEKEKDDVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQIALRNRDDHDNDDIRRFHHDGHDEDEQDVEMDDHDDFKENCSSHGDSRGMYGPLGGSMKKLKQVQVQEDANTFGNSVNGQGYNKSSHPHGQVVHSDVNQVLPEGMRAAWLQKQWVESRSLQLEEQKVQLQVEMLELEKQRLKWQRFSKKKDRELEKLSLENERMKLENERIALELKRKEMGAGLN