Gene Details:

  • Gene ID: KFK45057.1
  • Gene Family: Trihelix Family
  • Description: Trihelix Family protein
  • Species: Arabis alpina
  • Source: Trihelix family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_013742646.1  — trihelix transcription factor GTL1-like isoform X1
  • Swissprot:  Q9C882  — GTL1_ARATH; Trihelix transcription factor GTL1
  • TrEMBL:  A0A087HSF5  — A0A087HSF5_ARAAL; Uncharacterized protein
  • STRING:  A0A087HSF5  — (Arabis alpina)

Gene Ontology:

  • GO:0008361  — Biological Process — regulation of cell size
  • GO:0010090  — Biological Process — trichome morphogenesis
  • GO:0030308  — Biological Process — negative regulation of cell growth
  • GO:0032876  — Biological Process — negative regulation of DNA endoreduplication
  • GO:0042631  — Biological Process — cellular response to water deprivation
  • GO:0045892  — Biological Process — negative regulation of transcription, DNA-templated
  • GO:2000037  — Biological Process — regulation of stomatal complex patterning
  • GO:2000038  — Biological Process — regulation of stomatal complex development
  • GO:0005634  — Cellular Component — nucleus
  • GO:0043565  — Molecular Function — sequence-specific DNA binding

Family Introduction:

  • GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

Sequences:

CDS Sequence:
  • >KFK45057.1|Arabis_alpina|Trihelix|KFK45057.1
    ATGGAGCAAGCAGGAGGAGGTGGTAATGAAGTTGTGGAGGAAGCTTCACCGATCAGTTCAAGACCTCCGGCTAACTTGGAAGAGCTTATGAGATTCTCCGCCGCGGATGAGGGTGGTGTAGGTGGTGGAGGAGGAGGAAGTTCTTCTTCTTCCTCGGGAAATAGATGGCCAAGAGAAGAGACACTTGCCCTTCTTAGGATCCGATCTGATATGGATACTACTTTCCGTGATGCTACTCTCAAAGCTCCTCTTTGGGAACATGTTTCCAGGAAGCTGTTGGAACTTGGTTACAAACGCAGTGCAAAGAAATGCAAAGAGAAATTCGAAAACGTTCAGAAATATTACAAACGCACTAAAGAAACTCGTGGTGGTCGTCATGATGGTAAAGCTTACAAATTCTTCTCTCAGCTTGAAGCTCTCAACACTTCTCCTCCTCCACCACTTCTTCCTCCTCCTCCGCCTTCCTCTTCTTCCCTCGACGCCACTCCTCTCTCCGTCGCCAATCCTCCTCCTTCTTCCTCACATCATCAGTTCTCTGTCTTCCCGCAACCGCAACCGCCTCAGCAGCAACATATTACACACACTGTCTCCTTTACTACACCAATTCCACCACTTCCTCCTCCACTGGTGGCTCCAACGTTTCCCGGAGTCGCTTTCTCGTCACACAGCTCGTCCACGGCTTCGGGAATGGGGTCAGATGATGAAGACGACGAGGACGATATGGACTTGGATCAAGCCGCGGGTCCAAGCAGCCGCAAACGCAAACGTGGGAACCGCGGCCTTGGAGGCGGTAAGATGATGGAACTATTTGAAGGTTTGGTTAGACAAGTGATGCAGAAGCAAGCGGCCATGCAACGGAGCTTTCTTGAAGCACTTGAGAAGAGAGAACAAGAACGTCTTGATCGAGAAGAAGCTTGGAAACGTCAAGAAATGTCTCGGTTAGCTCGAGAGCATGAGGTCATGTCTCAAGAACGAGCAGCCTCTGCTTCTCGTGACGCTGCAATCATCTCATTGATACAGAAAATCACAGGCCACACTGTTCAGTTACCTCCTTCTTTATCATCTCAACCGCAACCGCCTCAACCGCCACCGCAAACGCATCAACCGCCACCAGCTGCTAAACGTGTTTCAACACAAGCTGTAGTAGAACAACAACACTCAACAGCTCAATCTCAATCACAACCAATAATGGCGATTCCACAACAACAAATTCTTCCTTCTCCTCCTCCTTCTACTCTTCCTCCTCAGCAACAAGATCAGAAACCGCAACAAGAGATGATCATGAGCTCGGAACAATCATTGTCACCATCATCATCACGGTGGCCAAAGGCTGAGATTCTTGCGCTTATAAACTTGAGAAGTGGAATGGAACCAAGGTATCAAGATAATGTACCCAAAGGACTATTATGGGAAGAAATCTCAACTTCAATGAAGAGAATGGGATACAACAGAAACGCTAAGAGATGTAAAGAGAAATGGGAAAACATAAACAAATACTACAAGAAAGTTAAAGAAAGCAACAAGAAACGTCCTCAAGATGCTAAGACCTGTCCTTACTTTCACCGTCTTGATCTTCTTTACCGCAACAAAGTACTCGGTAGTGGTGGTGGTGGTGGCGTAGCTAGCAGCTCTGGTCTACAACTTCAAGATCAAATTACATCAACAGTACCACAACAGTGTCCGGTCACTGCCATGAAGCCGCCACAAGAAGGAGTTTTTAACATTCATCAACCTCATCATGGGTCAGGTTCAAGTGAGGAAGAAGAACCTATAGAGAAAAGTCCACAAGGAACAGAAAAGCCAGAAGACCTTGTGATGAGAGAGCTGATACAACAAGAATCAATGATTGGCGAGTATGAAAAGATTGAAGAATCTCATAACTATAACAACATGGAGGAAGATGAAGAAGAGCTTGATGAAGAAGAACTAGACGAAGATGAGAAATCCGCGGCTTATGAGATTGCATTTCAAAGCCCTACAAACAGAGGAGGCAATAATGGCCACACTGAACCACCGTTCTTGACAATGGTTCAGTAA
Protein Sequence:
  • >KFK45057.1|Arabis_alpina|Trihelix|KFK45057.1
    MEQAGGGGNEVVEEASPISSRPPANLEELMRFSAADEGGVGGGGGGSSSSSSGNRWPREETLALLRIRSDMDTTFRDATLKAPLWEHVSRKLLELGYKRSAKKCKEKFENVQKYYKRTKETRGGRHDGKAYKFFSQLEALNTSPPPPLLPPPPPSSSSLDATPLSVANPPPSSSHHQFSVFPQPQPPQQQHITHTVSFTTPIPPLPPPLVAPTFPGVAFSSHSSSTASGMGSDDEDDEDDMDLDQAAGPSSRKRKRGNRGLGGGKMMELFEGLVRQVMQKQAAMQRSFLEALEKREQERLDREEAWKRQEMSRLAREHEVMSQERAASASRDAAIISLIQKITGHTVQLPPSLSSQPQPPQPPPQTHQPPPAAKRVSTQAVVEQQHSTAQSQSQPIMAIPQQQILPSPPPSTLPPQQQDQKPQQEMIMSSEQSLSPSSSRWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYYKKVKESNKKRPQDAKTCPYFHRLDLLYRNKVLGSGGGGGVASSSGLQLQDQITSTVPQQCPVTAMKPPQEGVFNIHQPHHGSGSSEEEEPIEKSPQGTEKPEDLVMRELIQQESMIGEYEKIEESHNYNNMEEDEEELDEEELDEDEKSAAYEIAFQSPTNRGGNNGHTEPPFLTMVQ