Gene Details:

• Gene ID: Kalax.0014s0106.1.p
• Gene Family: Trihelix Family
• Description: Trihelix Family protein
• Species: Kalanchoe marnieriana
• Source: Trihelix family gene from PlantTFDB

Protein Features:

• Pfam:  PF13837
• PROSITE profile:  PS50090
• InterPro:  IPR017877

Annotation Proteins:

• STRING:  cassava4.1_005544m  — (Manihot esculenta)

Gene Ontology:

• GO:0006355  — Biological Process — regulation of transcription, DNA-templated
• GO:0009909  — Biological Process — regulation of flower development
• GO:0010200  — Biological Process — response to chitin
• GO:0046621  — Biological Process — negative regulation of organ growth
• GO:0048442  — Biological Process — sepal development
• GO:0048498  — Biological Process — establishment of petal orientation
• GO:0090428  — Biological Process — perianth development
• GO:0005634  — Cellular Component — nucleus
• GO:0003677  — Molecular Function — DNA binding
• GO:0042803  — Molecular Function — protein homodimerization activity

Family Introduction:

• GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

• Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.   DOI:  10.1007/s00438-009-0507-x ;  PMID:  20039179

Sequences: