Gene Details:

  • Gene ID: Itr_sc000206.1_g00023.1
  • Gene Family: Trihelix Family
  • Description: Trihelix Family protein
  • Species: Ipomoea trifida
  • Source: Trihelix family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_019186189.1  — PREDICTED: trihelix transcription factor PTL-like
  • Swissprot:  Q9LZS0  — PTL_ARATH; Trihelix transcription factor PTL
  • TrEMBL:  A0A371IB98  — A0A371IB98_MUCPR; Trihelix transcription factor PTL (Fragment)
  • STRING:  GLYMA10G07730.1  — (Glycine max)

Family Introduction:

  • GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

Sequences:

CDS Sequence:
  • >Itr_sc000206.1_g00023.1|Ipomoea_trifida|Trihelix|Itr_sc000206.1_g00023.1
    ATGGAGGATCAGTATGGAATGGCGGATCTAAGGAACTTCATCAACAACCGCCCACTTTTCACTTCCAATCCCCACCCACACCCGCCGGAATTCCTATCCCCCCACCACCGGAATCTCCCGCCGCCACCGCCGCCGTCGTCGCATCACCCCTACGAGCTTGTCATGCCGCCGGTGCCCCGCGCCTTCCACCACGACTTCCTCCCCGACTCCAGCGCCAACAACGCCGCCGCCACCACCACCGCCAGCGTCATCACTGGCGGTGGCGCGTCCAGCTCCGCCTTCAGCGGCCTGGATATCGACGCCGGCGGCGGCGGCCTCGGCTTCGACGGCGGAAACGGCCGCTGGCCTCGCCAAGAGACCCTCACCCTCCTTGAGATCCGATCAAGACTCGATCCCAAGTTCAAAGAAGCCAATCAAAAAGGCCCCCTCTGGGATGAAGTCTCCAGGATTATGTGCGAGGAACACGGGTATCAGCGGAGCGGGAAGAAGTGCAGGGAGAAGTTCGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAGGGGAAAGCGGGGAGACAAGACGGGAAACATTATAGATTTTTCCGACAGCTCGAGGCTCTCTATGGTGAGCCCAGCAATTCCGGTTCCGTGTCGGAAACCCACCACGCCCAATCCAATTTTCCTTACAACAACGCCGTTATGGGGGCCAATAACACCCCCCACCAAGATCCCGCCGCCGGCGCCGCCTTTCTTCACGATTCAAAGGTGTCCGACAGCCTCAGCCTGTCGAATTCCTCGGACTACGACACGACATCCTCGGACGACCCCGACAGCGATCACGGCGCGATGGCGAGCAAGAAGAGGAAGGGGAAAGGGCGGTGGAAGGCCAAGATTAAGGATTTCATTGATGGGCAAATGAGGAAATTAATGGAGAAGCAAGAAGCGTGGTTGGATAAAATAATGAAGACGATTGAGCACAAGGAAGAGGAAAGGATGTTAAGGGAAGAAGAATGGCGAAAACAGGAAGCTTCTAGAATGGAGAGGGAGCAGAAATTCTGGGCAAATGAGAGAGCTTGGATCGAAGCTCGAGATTCTGCTTTAATGGAGGCTTTACATAAAGTAACCGGCAATGAATGTAACAAGAAAAGAAAAGACGACGACGAAAACAACAACAACCTAGGAATCTGCTACTCTTTCCAGAACAACAACAATGGAGCCTCATACTGCCCAGAAAATCAACCCATCAACCCGGCCATCAATGATAGCTGTTTTAGGCTTCTGATGGGGGACAATGCAGAAAATTTATGGGAGAATTATGGGTTGAAACTCAGCAAGGGAGGTGGAGATGATGAAAAATAA
Protein Sequence:
  • >Itr_sc000206.1_g00023.1|Ipomoea_trifida|Trihelix|Itr_sc000206.1_g00023.1
    MEDQYGMADLRNFINNRPLFTSNPHPHPPEFLSPHHRNLPPPPPPSSHHPYELVMPPVPRAFHHDFLPDSSANNAAATTTASVITGGGASSSAFSGLDIDAGGGGLGFDGGNGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMCEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGEPSNSGSVSETHHAQSNFPYNNAVMGANNTPHQDPAAGAAFLHDSKVSDSLSLSNSSDYDTTSSDDPDSDHGAMASKKRKGKGRWKAKIKDFIDGQMRKLMEKQEAWLDKIMKTIEHKEEERMLREEEWRKQEASRMEREQKFWANERAWIEARDSALMEALHKVTGNECNKKRKDDDENNNNLGICYSFQNNNNGASYCPENQPINPAINDSCFRLLMGDNAENLWENYGLKLSKGGGDDEK