Gene Details:
- Gene ID: GRMZM2G126148_P02
- Gene Name: LOC100383956, THX38, ZEAMMB73_122216
- Gene Family: Trihelix Family
- Description: Trihelix Family protein
- Species: Zea mays
- Source: Trihelix family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: NP_001353781.1 — uncharacterized protein LOC100383956
- Refseq: XP_008677660.1 — hypothetical protein
- TrEMBL: A0A3L6F5B7 — A0A3L6F5B7_MAIZE; Uncharacterized protein
- TrEMBL: C0PKA0 — C0PKA0_MAIZE; Trihelix transcription factor
- STRING: GRMZM2G126148_P02 — (Zea mays)
Family Introduction:
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature:
- Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses. DOI: 10.1007/s00438-009-0507-x ; PMID: 20039179
Sequences:
CDS Sequence:
- >GRMZM2G126148_P02|Zea_mays|Trihelix|GRMZM2G126148_P02
ATGGAAGGCAACGACCTACCCCCTGGAAACATGTTGCAAGGGGCTCCCTATGATAGTTTAGACTTACATGGCGACTCTATGGCAAAACATGCCCCAAACTCAGGAAAACAGATCTTCAGCAGCTCCCAGATGCCGGGGACTTTCACAATGTCTATGACCAGGGCTACAGAACCTGATGACTTTCCTGGGTTTCAGTTCAAAGAACATGGAAAGAGTGATGACCACCACCACCACCAATACCATAGTCATCACCAAAAGAACTGCATGAGTGATGGTGAAGAACATGATATGGCTGAAGATGCTACTGATACCCCAAGTGGAAAAGGCAAGAAGGGCTCTGCATGGCATCGGATGAAGTGGACAGATTCAATGGTAAAACTTTTGATTACAGCAGTGTCTTACACTGGAGATGATCATGGTGCTGATTCTGGTGGTGGCAGGAGGAACATTGCAATAACGCAGAAGAAGGGCAAATGGAAGGCGATATCGAAGGTTATGGGAGAGAGAGGTTGCCATGTGTCACCGCAACAGTGCGAGGACAAGTTCAATGACCTTAACAAGAGATACAAAAGGCTGATAGACATCCTTGGCATGGGCACTGCTTGCAATGTTGTGGCTAATCCAGCACTTCTTGATAGCATGAATCATCTTTCTGATAAGATGAAAGACAATGCAAAAAAGATACTTAGCTCAAAGCACTTATTTTATGAGGAGATGTGTTCCTACCACAACAACAACCGTGCAAATTTGCCTGAAGATCATGCACTTCAGCATTCACTACTGCTTGCCCTTAGATGTAAAGAGGAGCATGATCTTCGGAGAGCAAGTGGAGATGCTGATGAAGACGATCGAAGTGCGGATTCTGATTATGGGGAGAATGATGAAGAGCAATATCCTGTGCATACACGCATGAGGGAGCCCTCAACCACCAAAAGGAAGCGCCACAGAGATGTGGCTTTGGTCACATCAAACTCTCATGAAGGCAGTGAGAGGTCTGATCCCCATGATGTAACAGTGGACATCAACAAGGCTTTCACAGATGCAACCAACATGGTTTTGTTGCAACAGGACTTGGCTTCACAAGCCATAGAGATTCAGAAACGTCGCTTGCAGATTGAAGCAAAGGAACTGGAACTCACAAAGCAACGTCACAAGTGGGAGCGGTTCAGGAAGAAGAAGGACAGGGAGATAGAAAGAATGGCACTGGAGAATGAACATATGGTGATTGAGAACAAACGCTTGGAACTTGAGCTGAGACATAAGGAGTTAGAGCTAGAGCTTAAGCTGAAAGGCAAGGGGAACCATCCATAA
Protein Sequence:
- >GRMZM2G126148_P02|Zea_mays|Trihelix|GRMZM2G126148_P02
MEGNDLPPGNMLQGAPYDSLDLHGDSMAKHAPNSGKQIFSSSQMPGTFTMSMTRATEPDDFPGFQFKEHGKSDDHHHHQYHSHHQKNCMSDGEEHDMAEDATDTPSGKGKKGSAWHRMKWTDSMVKLLITAVSYTGDDHGADSGGGRRNIAITQKKGKWKAISKVMGERGCHVSPQQCEDKFNDLNKRYKRLIDILGMGTACNVVANPALLDSMNHLSDKMKDNAKKILSSKHLFYEEMCSYHNNNRANLPEDHALQHSLLLALRCKEEHDLRRASGDADEDDRSADSDYGENDEEQYPVHTRMREPSTTKRKRHRDVALVTSNSHEGSERSDPHDVTVDINKAFTDATNMVLLQQDLASQAIEIQKRRLQIEAKELELTKQRHKWERFRKKKDREIERMALENEHMVIENKRLELELRHKELELELKLKGKGNHP