Information report for GRMZM2G016649_P03
Gene Details
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Functional Annotation
- Refseq: NP_001344790.1 — uncharacterized LOC100279868 isoform 2
- Swissprot: Q39117 — TGT2_ARATH; Trihelix transcription factor GT-2
- TrEMBL: B8A0E1 — B8A0E1_MAIZE; Uncharacterized protein
- STRING: GRMZM2G016649_P03 — (Zea mays)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >GRMZM2G016649_P03|Zea_mays|Trihelix|GRMZM2G016649_P03
ATGCAGCAGCAGCACCAGGGTGGCGGCGGCGGCGGTGGCGGAGGCTCACAGTTCGGGGCCCCGCCGCCGGACATGGGCCCCTTCTCGCCGACGCCGGCTGCTACCGGTCCCATGCCGCTGAGCAGCAGGCCTCCGTCGGCGCAGCCGCAGCAGCAACCGAGGACCAGCTACGAAGAATTGGCGCCCATGGTGCCTGGGGCCGCCGCTGCCAGTGGCTTCGACGACGAGACGATGGGTAGTGGCGGCGGCGGCGGCGGGTCGTCGGGCGCGTCCAGCAACCGGTGGCCGCGGGAGGAGACGCAGGCGCTCATCAGGATCCGGTCGGAGATGGACGCAACCTTCCGCGACGCGACGCTCAAAGGCCCCCTATGGGAGGACGTCTCCAGGAAGCTTGCCGACCTGGGCTACAAGAGGAGCGCCAAGAAGTGCAAGGAGAAGTTTGAGAACGTGCACAAGTACTACAAGCGCACAAAGGAAGGCCGCGCCGGCAGGCAGGACGGCAAGAGCTACCGCTTCTTCGAGGAGCTGGAGGCGTTGCACGCAGCCGCGCCGCAGCCGCCACCACAGCACTTGCCGGCAGCCAGCACCGCCCCGCAGTTGCACGCCCTCGCCGCGCCAGTATCCCCGACGCCCCAGCAGCAGTTGCCGGCATCCAGCGCCGCCCCGCCGTTGCACGCCTTCCCCGCGCCAGTATCCGCGCCGCCGCCGTTGAGTTCAATGCCACTGCTGACAGGGCCGATGCAGCCAGCGCCCATATCATCGGCGGCCCCAGCCCCGGCACCGGTGGATCTGCTCGTGGCCCACCAGCCCCTCAACCTGCAAGGCTTCAGCTTCTCTTCCATGTCGGACTCGGAGTCCGACGACGAGTCCGAGGACGACGACATGACGGCGGAGACAGGCGGAAACCAGGACCGCCTCGGCAAGCGGAAGCGCGGCGACGGCGGCGGCAGCAGCAGCAACAAGATGATGTCTTTCTTCGAGGGGCTCATGCAGCAGGTCGTCGACAGGCAGGAGGAAATGCAGCGGCGGTTCCTGGAGACCATGGAGAAGCGGGAGGCCGAGCGCACGGCTCGGGAGGAGGCGTGGCGCAGGCAGGAGGTCGCCCGCCTCAACCGCGAGCAGGAGCAGCTCGCTCAGGAGCGCGCCGCCGCGGCCTCCAGGGACGCCGCCATCATCGCCTTCCTCCAGCGCATCGGCGGGCAGTCCGTGCAGCCCCCTGCTACCGCCGTTGTTGTCCCAATGCCAGCACCGGTGTCAGTCCATACCACGCCGCCGAAACAACCTTCTCGCCAGCAGCAGCAACCGCCGCCGCCGTCGCCCCAGGCCGGCCAGGCGACACCGCAGTCGAAGCCAATCTCAGCCGCGCCGCTCCAGCAGCAACCGCCACAGCAGCAACCGAAGGATACGTCGCAGCAGGACGCCGGCACGCCGCGCAGCTTGCCCCCGGCGTCTAGCCAGTCACTCGAGCTGGTGCCCGTCGCCGCCACGGAGCACCACGTCGATTCCGGGCTAGGAGGAGGGGATGGAGGTGCGGCGTCGTCATCGCGGTGGCCCAAGACCGAGGTGCACGCGCTCATCCAGCTGCGCATGGACCTGGACATGCGCTACCAGGAGACAGGTCCCAAGGGTCCTCTCTGGGAGGATATTTCGTCCGGGATGCGGCGGCTGGGATACAACCGGAGCTCCAAGCGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTACAAGAAGGTGAAGGAGAGCAACAAGAAGCGGCCCGAGGACTCCAAGACCTGCCCATACTTCCACCAGCTCGAGGCCATCTACAACAGAAAGCACCTCCGCAGCCTCACAACCGCGGCCACATCGTCCGCCGCCGCCGCTCCTCGTCCCGCCTACCCAGATCAGCTGAACCCGAGCAGGCAAGAGATAGAGGGGAAGAACATCAACGATGACAAGAGGAACAACGGTGGATCAGGTGGAGGCACGCAGGTGCCGACCAGCAATGGCGAGACAGCGACGACGACGACGACGACGACGCTCGTCGCGTTCGACGCCGACACCGGCATGAAGAAGCCAGAAGACATCGTCAGGGAGTTGAACGAGCACCCGCGTCGGGAGTTCACGACGGAGGACGAGACGGACAGCGACGACATGGGCGACGAGTACACCGACGACGGCGAGGAAGGCGAAGACGACGGCAAAATGCAGTACAGGATACAGTTCCAGAGGCCGAACCCGGGCGGCACCAACACCGCGCCAGCACCGGCAGCAGCGACGACGGCTGCGCCAGCGGTGCCGACTTCGGCTCCGACCAGCACCTTCCTCGCCATGGTTCAATAG
Protein Sequence:
- >GRMZM2G016649_P03|Zea_mays|Trihelix|GRMZM2G016649_P03
MQQQHQGGGGGGGGGSQFGAPPPDMGPFSPTPAATGPMPLSSRPPSAQPQQQPRTSYEELAPMVPGAAAASGFDDETMGSGGGGGGSSGASSNRWPREETQALIRIRSEMDATFRDATLKGPLWEDVSRKLADLGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFEELEALHAAAPQPPPQHLPAASTAPQLHALAAPVSPTPQQQLPASSAAPPLHAFPAPVSAPPPLSSMPLLTGPMQPAPISSAAPAPAPVDLLVAHQPLNLQGFSFSSMSDSESDDESEDDDMTAETGGNQDRLGKRKRGDGGGSSSNKMMSFFEGLMQQVVDRQEEMQRRFLETMEKREAERTAREEAWRRQEVARLNREQEQLAQERAAAASRDAAIIAFLQRIGGQSVQPPATAVVVPMPAPVSVHTTPPKQPSRQQQQPPPPSPQAGQATPQSKPISAAPLQQQPPQQQPKDTSQQDAGTPRSLPPASSQSLELVPVAATEHHVDSGLGGGDGGAASSSRWPKTEVHALIQLRMDLDMRYQETGPKGPLWEDISSGMRRLGYNRSSKRCKEKWENINKYYKKVKESNKKRPEDSKTCPYFHQLEAIYNRKHLRSLTTAATSSAAAAPRPAYPDQLNPSRQEIEGKNINDDKRNNGGSGGGTQVPTSNGETATTTTTTTLVAFDADTGMKKPEDIVRELNEHPRREFTTEDETDSDDMGDEYTDDGEEGEDDGKMQYRIQFQRPNPGGTNTAPAPAAATTAAPAVPTSAPTSTFLAMVQ