Information report for Ciclev10004233m
Gene Details
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Functional Annotation
- Refseq: XP_006421798.1 — uncharacterized protein LOC18033560
- TrEMBL: V4RLF6 — V4RLF6_9ROSI; Uncharacterized protein
- STRING: XP_006421798.1 — (Citrus clementina)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Ciclev10004233m|Citrus_clementina|Trihelix|Ciclev10004233m
ATGGGTGACAACAAAGGAGATACAACCAAGAAGCAACAATCACAACAACAACCTCAACAGCTGCAGCAGCAGCAACAGCAACCTCAGCAGCAACAACTTTCATCCTCCCCGAAAAATCCACTTGAGGAGTCAACTGAAAAAGGCCAGCACCATCACCAACAGCCGCCGGCAGTTGTGGTCACCGGAGCTCCGTACATCTCTGCTCCTTTGTATGTTCCTATTGGTCCAACTTCTTCCTCTCCATTTGAGCAACAATTTGAGCCAGTAAATCCCAAAAGGCAACGATATAATAGCAGCCAATGGAAGCTTTTACCATCACCATCTCAACAGCAACAACAAAAGCAACAAGCCCAAATGGCTATACTCACCACAGAATCAAGCCCATCACCAACCACACTCCCAATAACCAACCCACAAAGCCAAGCTCATACCACCACGGCTTCCTCTTCAGACACAGCATCATCTCCTCCTCACTCACCTATTCCTTCTCTCTCAGCAGCTTCTGGTCAAGAGACAAACAGGCCAGAATTACTGGGTGAGCAATTTCACCCCCAGTTCAGAAAAGGCAAGTATGTAAGCCCAGTTTGGAAACCAAACGAGATGCTGTGGCTAGCTAGGGCTTGGAGGATTCAGTACCAAGGTGGTGGTGGATCCAACGGCTCTGGATCTTCCTCAAGAGTTGATCATCATCAGCCAGAGAGTACTGGTCAGGGAGAAGTTGCTGCTGCTGCCCAATCAACGAGAGCAAAAACTAGGGCTGATAAAGACAGAGAAGTTGCAGAGTTCTTGCAAAGACATGGAGTGAATAGAGATGCTAAAACATCTGGGACCAAGTGGGATAACATGTTGGGTGAATTTAGAAAGGTTTACGAATGGGAGAGAGGCGGTGAAAGAGAACAAGTTGGTAAGAGTTACTTCAGACTCTCTCCATATGAGAGGAAATTACACAGGCTACCAGCTTCATTTGATGAAGAAGTATTTGAAGAATTGTCTCAGTTCATGGGGTCTCGCATGAGATCAACATCTCAAAGCAGAGCAGCTTCTTCTGTTTTTGTTTCAAGTGATCATGACAATAGATCAACCAGAGCTCTTCCTCCTCCCCCTCCTTTCAAAGAAGATGAGCTCTCTCTCTCTGCGAGGGCAAAGCAACTGGTGATGACAAGTGGGGGGGAAGCTTTTTTCCATGGTGGAAGAGGGAGCTTGTTAGGGTTCGAGTCTTCACTAGATGTGGGTTCCAAGGAACTCAGAAGAATAGGCAGAATAAGAATGACATGGGAGGAGTCAGTGAGCTTGTGGGCAGAAGAAGGTGAGCATCAAAGAGGAAGAATAAAGCTTCAAGGGTCAAGCTTTTTGAATGCGGACGAGCTCACTTTCTTTGATGACGCTATGGTTGCTTGCAACATGGAAGCTTTCGAAGAAGGAACTCTTAGAGGTTTCTCTGTTGATAGATTCGTTCCTGGACAGCAAGTCAAAGTCTTTGGCAGAAGAAAGTCTTCCTCAGGCTCAGCTTCTGCTTCTTCTGCTGGTTTCTTTGAAAGAGTTCAGTTCCCATTCACTGAACCCTCCATAAGATTTACTCCATGGGAGTATCAGGATCCAAGTGACTACTACGTGGGATGTCTTCGTGTCCCGCCGACAACACTACCTAGCTTGTTCGAGCTTTCATGGCATTTACAAGAGCCACCACCCGAGGAATTTCGTTTCCCAATTAGAAAAGATGTTTATAGAGACTTACCGCAAGGGAAAGAAATTTTCTTTACTACTTCAACTGAATTGTTAGATTGTAGGGCCATTACATACGATATTTTAAGCCCCATTATTCGTGGTAATAACCCTAGTCTTAGTTTTTCAACCGCCGCTAGTAGAGATTCCTTCATTGGCCTTTGGGATGATTGCATCAATAGGGTTGTTTCCAAATTCTGTTCTTCTGAAATGGTCATTGTACGGAAACCTTCTTCTTCATCAATATCATCACCAGAGCCATTGCAGGACCAATGGCCAAACGTGACGGGGTTTGTTAGAAATCTTTGTTTGTGGAGAGGAGAAGAGACCGATCAATTGAAAGAAGGCCAACTTGATCCTTCATCTTCAATTGTGGAGAAGCTACTATGGACTTACATGGACCTTCCGTATTTGTTTGGCTACTATGCGGTCGGCTACATAGTAACATTCTGTGCATTGAGTCGATCACAAGACCGTGTTGTGAGAACAGATTTGTATTCACTAGACTTGTCTTCACCAGTTGAGAGGCTCAAAGCCCTAATCCCATGTTACAGAATAGCAGGCCTGTTGCCTTTGTTAGCCGATCGTTGCTTCAACAGCAGCAGCAGCATTATTAGCAACGGCGGCGGTGGTTACAAGCAGTACCCTTTCAGTGATTTCGAAAGAATCGATTTGGGCAGCGGTAACATCATCGAAATGACACCAAACACAGTCACTAGATTTTTCTCGAGCAAGAGAAAATGGGCAGCGGTGAAACAGATATACGATTTCTTAGACCACAGAATCCCGCACGCAGAGGCCATATACGAGTCATCAGAGAAAGATTTGGCATTGGTGTTCAAGCCAAGAGGGTGCAAACTGAAGCCCACGAGTTGTGAGCAACTCGTGGAGGCACTCAAATACGTGACCAAAGCACTAGTAGCGTTACACGATCTATCTTTCATGCACAAGGACCTGAGTTGGGATAAAGTGATGAGAAGAAGCGATAGGGAAAACGAGTGGTTCGTAAGTGGGTTCGATGAGGCAGCGAGCGCGCCGCAGATATACCCACAGTTGGTGGCGGCGGTGGCGGGAGGAGTGGAGGCGCGTGGGAGGCACGCACCGGAGATGGGGAGGCCCGGGTTGCATGGAGTGAAAGTTGACGTATGGGGAGTGGGGCAGTTGGTGAAAACATGCGGGCTGAGCAATGTGCCCAAAATGCTTAGAGAGTTGCAAAACAGATGCCTTGATCAGAACCCAGAGCTGAGGCCAACCGCCGCCGACTGTTACCACCACCTGCTTCAGTTGCAGTCGTCTCTGTCAGTAGCCGCAGCCTCCTCTAGTACTGCTCCCTATTAG
Protein Sequence:
- >Ciclev10004233m|Citrus_clementina|Trihelix|Ciclev10004233m
MGDNKGDTTKKQQSQQQPQQLQQQQQQPQQQQLSSSPKNPLEESTEKGQHHHQQPPAVVVTGAPYISAPLYVPIGPTSSSPFEQQFEPVNPKRQRYNSSQWKLLPSPSQQQQQKQQAQMAILTTESSPSPTTLPITNPQSQAHTTTASSSDTASSPPHSPIPSLSAASGQETNRPELLGEQFHPQFRKGKYVSPVWKPNEMLWLARAWRIQYQGGGGSNGSGSSSRVDHHQPESTGQGEVAAAAQSTRAKTRADKDREVAEFLQRHGVNRDAKTSGTKWDNMLGEFRKVYEWERGGEREQVGKSYFRLSPYERKLHRLPASFDEEVFEELSQFMGSRMRSTSQSRAASSVFVSSDHDNRSTRALPPPPPFKEDELSLSARAKQLVMTSGGEAFFHGGRGSLLGFESSLDVGSKELRRIGRIRMTWEESVSLWAEEGEHQRGRIKLQGSSFLNADELTFFDDAMVACNMEAFEEGTLRGFSVDRFVPGQQVKVFGRRKSSSGSASASSAGFFERVQFPFTEPSIRFTPWEYQDPSDYYVGCLRVPPTTLPSLFELSWHLQEPPPEEFRFPIRKDVYRDLPQGKEIFFTTSTELLDCRAITYDILSPIIRGNNPSLSFSTAASRDSFIGLWDDCINRVVSKFCSSEMVIVRKPSSSSISSPEPLQDQWPNVTGFVRNLCLWRGEETDQLKEGQLDPSSSIVEKLLWTYMDLPYLFGYYAVGYIVTFCALSRSQDRVVRTDLYSLDLSSPVERLKALIPCYRIAGLLPLLADRCFNSSSSIISNGGGGYKQYPFSDFERIDLGSGNIIEMTPNTVTRFFSSKRKWAAVKQIYDFLDHRIPHAEAIYESSEKDLALVFKPRGCKLKPTSCEQLVEALKYVTKALVALHDLSFMHKDLSWDKVMRRSDRENEWFVSGFDEAASAPQIYPQLVAAVAGGVEARGRHAPEMGRPGLHGVKVDVWGVGQLVKTCGLSNVPKMLRELQNRCLDQNPELRPTAADCYHHLLQLQSSLSVAAASSSTAPY*