Gene Details:

  • Gene ID: C.cajan_10032
  • Gene Name: KK1_010316
  • Gene Family: Trihelix Family
  • Description: Trihelix Family protein
  • Species: Cajanus cajan
  • Source: Trihelix family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_020213533.1  — trihelix transcription factor PTL
  • Swissprot:  Q9LZS0  — PTL_ARATH; Trihelix transcription factor PTL
  • TrEMBL:  A0A151TVI5  — A0A151TVI5_CAJCA; Uncharacterized protein
  • STRING:  GLYMA19G37660.1  — (Glycine max)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0009909  — Biological Process — regulation of flower development
  • GO:0010200  — Biological Process — response to chitin
  • GO:0046621  — Biological Process — negative regulation of organ growth
  • GO:0048442  — Biological Process — sepal development
  • GO:0048498  — Biological Process — establishment of petal orientation
  • GO:0090428  — Biological Process — perianth development
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0042803  — Molecular Function — protein homodimerization activity

Family Introduction:

  • GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

Sequences:

CDS Sequence:
  • >C.cajan_10032|Cajanus_cajan|Trihelix|C.cajan_10032
    ATGGAAATGGAGGACCATCATCATCATCACCATCATCATGAGCAGCAGCAGCAACAGTATGGCATCACTGATCTGAGGCAACTCTCGAGCCATTTCCCCTCCATGCCGCCGCAGCCCACGGCGGAGCTCTTCCCCGCCGGCCACCCCAACCTGGCGGCGACGCAGCACTACGAGATGATGATGTTTGGTCGTCAAGTGGCGGATATAATGCCTCGTTGTCTTCATGACTTTGCGTCCACCGATTCCGCCACTAACACCACCATCGCTGTTGCTACTCCCACCACCACTAGTGCTTCCACTCCTCCTCTTAGTTGCTTAGAGGCTGAAACCGCAGGATGCATCGCTGGAGACGCATCCACCGGAAGATGGCCCCGACAAGAGACTCTCACTCTTCTTGAGATCAGATCTCGCCTCGACTCTAAATTCAAAGAGGCTAATCAAAAGGGCCCCCTTTGGGATGAGGTTTCTAGGATCATGTCTGAAGAACATGGATACCAAAGGAGTGGGAAGAAGTGCAGGGAGAAGTTTGAGAACCTTTACAAATATTACAAGAAGACAAAGGAGGGAAAGGCAGGAAGACAGGATGGGAAGCATTACAGGTTCTTTCGTCAACTTGAAGCCTTATATGGTGAAAACAGTAACCAAGCCTCGGTGCCAGAAACCAATTTTGGAAGTAGCAGCCTTCGTTTCCACACAAGCAGCCACACTAACCCTTCTCAAACAAATCAAGAAATGTTTCAGTCTCAGAAGCATTGTGATAGCCTCAGTCTCACCAACTCCACTGACTTGGACACGTCATCATCGGATGACAATGATCAAAACAGCACTGGGGGACTCAAGGACAATGACTCCATGGAGAAGAGGAGAAAGAGGGTGAGTGGAAGAAGCTGGAAGGTGAAGATAAAAGACTTCATTGACTCACAGATGAAAAAACTGGTGGAGAAGCAAGAGGAGTGGTTGGATAAACTCACAAAGACACTGGAACAGAAGGAAAAGGAGAGGGTATTAAGGGAAGAAGAGTGGAGGAGACAAGAAGCTGCAAGGTTGGAGAGGGAACACAAATTTTGGGCCAAAGAGAGAGCATGGATTGAAGCAAGGGATGCTGCTTTGATGGAGGCTTTGCAAAAATTAACAGGAAATGAGATAAAGAGTACTCAATCTCCTGAGGGTCTAATGGTAACTGGAATTCAAAACCACAGTGAGAACCAGAATGAAGATGGAAGTGAAATACTAAATAGCACTATTGCAAGAGGTGCTGAGAGCTGGCCAGAATCTGAGATTACAAGGCTTCAACAGTTGAGAGCTGAGATGGAGACAAGGTACATCCAAAATGGGTGCTCAGAAGAGGTTATGTGGGAGGAAATAGCAACCAAAATGGCTTGTTTTGGTTACGAAAGGAGTGCTTTGGTGTTCAAGGAGAAATGGGAAACTATGAGCAGCTATGCCAAGGATGGAAACAAGAAGCGCAAGGAAAACTCAAGAGGTTGTTTTTTCTTCGATAACAGTGACCAGTCTTCTCTGTATAACCAAGGAGGTTCCTATTGTGATATCAATGATCAAAGGCACGAGACTGGGAGGATGCAAACAAATGATGGTTCTTCACCTTCGAATTCAAATGTTGGGAATGCAGTTGCGGGTGATAACTGCTTTCCCTTCTTGATGGCTGAGGGTGGAAATTTGTGGGAGAACTATAGCTTAAAGGTTAATAAAGCAAACCAAAACCAGTGA
Protein Sequence:
  • >C.cajan_10032|Cajanus_cajan|Trihelix|C.cajan_10032
    MEMEDHHHHHHHHEQQQQQYGITDLRQLSSHFPSMPPQPTAELFPAGHPNLAATQHYEMMMFGRQVADIMPRCLHDFASTDSATNTTIAVATPTTTSASTPPLSCLEAETAGCIAGDASTGRWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENSNQASVPETNFGSSSLRFHTSSHTNPSQTNQEMFQSQKHCDSLSLTNSTDLDTSSSDDNDQNSTGGLKDNDSMEKRRKRVSGRSWKVKIKDFIDSQMKKLVEKQEEWLDKLTKTLEQKEKERVLREEEWRRQEAARLEREHKFWAKERAWIEARDAALMEALQKLTGNEIKSTQSPEGLMVTGIQNHSENQNEDGSEILNSTIARGAESWPESEITRLQQLRAEMETRYIQNGCSEEVMWEEIATKMACFGYERSALVFKEKWETMSSYAKDGNKKRKENSRGCFFFDNSDQSSLYNQGGSYCDINDQRHETGRMQTNDGSSPSNSNVGNAVAGDNCFPFLMAEGGNLWENYSLKVNKANQNQ