Information report for BGIOSGA014631-PA
Gene Details
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Functional Annotation
- Refseq: XP_015637050.1 — trihelix transcription factor GTL1 isoform X2
- TrEMBL: A0A0E0PC57 — A0A0E0PC57_ORYRU; Uncharacterized protein
- TrEMBL: B8ASL5 — B8ASL5_ORYSI; Uncharacterized protein
- TrEMBL: Q01IP4 — Q01IP4_ORYSA; H0115B09.8 protein
- TrEMBL: Q7XR86 — Q7XR86_ORYSJ; OSJNBa0011L07.15 protein
- STRING: ORUFI04G21880.1 — (Oryza rufipogon)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >BGIOSGA014631-PA|Oryza_sativa_subsp._indica|Trihelix|BGIOSGA014631-PA
ATGCAGCAGCACCAGGGTGGCGGGTCCCAGTACGGGGCCGTGCCGCCGGACATGGGGCCGTTCTCGCCGACGCATCATGCTTCGGCGCCGGCCCCCCTGCCGCTGAGCAGCCGGCCACCGCCGGCGGCGTTGTCTCAGCCACCGCCGCCGCAGCAGCAGCAGCAGCAACCGAGGACGAGCTACGACGAGCTGGCCGCCGCGACCAGCGCCGGCGCGGGCGGCTTCCCCGACGACGACATGCTGGGCGACGCCGGCGGCAGCGGCGGCGGCGGTGGGTCGGGAGCGGCCGGCAACCGGTGGCCGCGGGAGGAGACTCTAGCCCTCATCAGGATCCGGTCGGAGATGGACGCCACCTTCCGCGACGCCACCCTCAAGGGTCCCCTCTGGGAGGAGGTCTCCAGGAAGCTCGCGGAGTTGGGCTACAAGAGAAGCGCCAAGAAGTGCAAGGAGAAGTTTGAGAACGTCCACAAGTACTACAAGCGCACCAAGGAAGGGCGCGCCGGGAGGCAGGACGGCAAGAGCTACCGCTTCTTCACTGAGCTGGAGGCGTTGCATGCCGCTGCGCCGCAGACGCCCCAGCCGCAGCAGCAGCAGCAGCAGCAGTTGCCGCCGGTTACAAGCAGCGCACCCGCGATGCACGCCTTCGCGCCGCCGGTTCCCGCGCCACCGCCGATGAGCGCAATGCCACCGCCGCCGGGGCCGATCCAGCCGGCCCCGATATCTTCTGCGGCTCCCGCGGTGCCCCTGGAGCTGCCGCCGCAGCCGCCCATCAACCTGCAAGGCTTAAGCTTCTCGTCCATGTCGGGGTCCGAGTCGGACGATGAGTCTGAAGACGACGAGATGACGGCGGAGACCGGCGGCAGCCAGGACCGCCTCGGCAAGCGCAAGCGAGGCGCCGGCGGCAAAAGGCTGGCGACTTTCTTCGAGGGGCTCATCAAGCAAGTCGTCGACAGGCAGGAGGAGATGCAGCGGCGGTTTCTGGAGACTATGGAGAAGCGAGAGGCGGAGCGCACGGCGCGGGAGGAGGCGTGGCGCAGGCAGGAGGTGGCCCGCCTCAACCGCGAGCAGGAGCAGCTCGCCCAGGAGCGCGCCGCGGCGGCCTCCCGCGACGCCGCCATCATCTCCTTCCTCCAACGCATCGGCGGTCAGTCCGTACAGGTCCCACCCGCCGCCACCGTCATCCAGATGCCCACACCGGTGCAGCTCCAGACCCCTCCGCCGGTCAAGCAACCTGCCAGGCAGCACCAGCCACAGCCAACGCCGCCGCCGCCGCAGGCGGCGCCAATCCCGGCCGCGCCCCTCCAGCAGCAACCGCCGCAGCCGCAGCACAAGGAGACGATTCACCACGAGGCAGTGACGCCGCGCAGGGCGCCACCGACGTCCGGCTCATCACTCGAGCTGGTGCCCGCGGCGGAGCAGCACGTCGAGAGCGGGCTAGGAGGAGGGGAGGGCGGGTCGGCGTCGTCGTCGCGGTGGCCCAAGACGGAGGTGCAGGCACTCATACAGCTGCGCATGGAGCTCGATATGCGCTACCAGGAGACCGGGCCGAAGGGCCCGCTCTGGGAGGAGATCTCGTCGGGGATGCGGCGGCTGGGGTACAACCGGAGCTCGAAGCGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTGAAGGAGAGCAACAAGAAGCGGCCCGAGGACTCCAAGACATGCCCGTACTTCCACCAGCTCGACGTCATCTACCGCAGGAAGCACCTCACCGGCGGTGGCGGCGGCGGCGCTTCCGCGGCCAATGTCGCCGCCACGGCAATCGAGCACCAGAACCCGAACCGGCACGAGATAGAGGGGAAGAACATAAACGACAACGACAAGAGGAAGAACGGCGGAGGCGGCGGCGCGCAGGTGCCCACCAGCAATGGCGACACGGCACCGACCACGGCCACGTTCGACGTCGATAGCGGCATGAAGAAGCCAGAAGACATTGTGAGGGAGCTGAGCGAGCAGCCGCCCCGGGAGTTCACAACGGACGAGACCGACAGTGACGACATGGGCGATGACTACACCGACGACGGCGAGGAAGGCGAGGACGACGGCAAAATGCAGTACAGGATACAGTTCCAGAGGCCGAACCCGGGCGGCGCCAACACCGCACCTCCGCCGGCGACAACCCCGGCGTCCGCGGTGCCAACCTCGACTCCGACGAGCACCTTCCTCGCCATGGTTCAATAG
Protein Sequence:
- >BGIOSGA014631-PA|Oryza_sativa_subsp._indica|Trihelix|BGIOSGA014631-PA
MQQHQGGGSQYGAVPPDMGPFSPTHHASAPAPLPLSSRPPPAALSQPPPPQQQQQQPRTSYDELAAATSAGAGGFPDDDMLGDAGGSGGGGGSGAAGNRWPREETLALIRIRSEMDATFRDATLKGPLWEEVSRKLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTELEALHAAAPQTPQPQQQQQQQLPPVTSSAPAMHAFAPPVPAPPPMSAMPPPPGPIQPAPISSAAPAVPLELPPQPPINLQGLSFSSMSGSESDDESEDDEMTAETGGSQDRLGKRKRGAGGKRLATFFEGLIKQVVDRQEEMQRRFLETMEKREAERTAREEAWRRQEVARLNREQEQLAQERAAAASRDAAIISFLQRIGGQSVQVPPAATVIQMPTPVQLQTPPPVKQPARQHQPQPTPPPPQAAPIPAAPLQQQPPQPQHKETIHHEAVTPRRAPPTSGSSLELVPAAEQHVESGLGGGEGGSASSSRWPKTEVQALIQLRMELDMRYQETGPKGPLWEEISSGMRRLGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDVIYRRKHLTGGGGGGASAANVAATAIEHQNPNRHEIEGKNINDNDKRKNGGGGGAQVPTSNGDTAPTTATFDVDSGMKKPEDIVRELSEQPPREFTTDETDSDDMGDDYTDDGEEGEDDGKMQYRIQFQRPNPGGANTAPPPATTPASAVPTSTPTSTFLAMVQ