Gene Details:
- Gene ID: AT3G10030.2
- Gene Name: T22K18.15
- Gene Family: Trihelix Family
- Description: Trihelix Family protein
- Species: Arabidopsis thaliana
- Source: Trihelix family gene from PlantTFDB
Protein Features:
Annotation Proteins:
- Refseq: NP_001078129.1 — aspartate/glutamate/uridylate kinase family protein
- TrEMBL: Q9SR68 — Q9SR68_ARATH; Aspartate/glutamate/uridylate kinase family protein
- STRING: AT3G10030.1 — (Arabidopsis thaliana)
Gene Ontology:
- GO:0008652 — Biological Process — cellular amino acid biosynthetic process
- GO:0016310 — Biological Process — phosphorylation
- GO:0005737 — Cellular Component — cytoplasm
- GO:0016301 — Molecular Function — kinase activity
Family Introduction:
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature:
- Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses. DOI: 10.1007/s00438-009-0507-x ; PMID: 20039179
Sequences:
CDS Sequence:
- >AT3G10030.2|Arabidopsis_thaliana|Trihelix|AT3G10030.2
ATGGCGTCGTGTGATGACGATTTCTCTCTACTTGGAGACGATCAGTCAAACCCTAATCAACATCACCACCACCACCAAGTTCTTCATCACACGCCCTACGCTCCTAGACGATTCAACCCGAAACCATCGAATCAGATCCTTTTACCGCATCACCAGAGGAACGGCGACGAGGACGACGAGAACGATGTCGTTGTAGAAGCGTCTTCTGCTTTCCACGGTCACGGTGTTAATCCTTTCACGGCGGACGAAAATTCGAATCCGTATGATGATAATAACGCAGCTGTAGACGAAGACGAAGACGAAGATCTCGGTGCCAACAGATCTAGAATCGGAGGTGTTCGTGTTGAGAAGAGGCAGAGTCAGGAGGAGCTAAGTGACGGAGGAACAACAAATGGCGGTGAGATTACTCCCTACGGTAGCTTCAAGAGACCGAGGACTTCGTCTTCCTCAGCTGGTGAGTATAGGAAGGATAGAGAAGAGTGGAGTGATGCGGCGATTGCGTGTTTGTTAGATGCGTATTCGGATAAGTTCACACAGCTTAATCGAGGGAATCTCCGGGGAAGAGATTGGGAAGAGGTTGCTTCATCGGTGAGTGAGAGGTGTGAAAAGCTGAGTAAGAGTGTAGAACAGTGTAAGAACAAGATTGATAATCTCAAGAAGAGGTATAAGCTTGAAAGGCATAGAATGAGCAGTGGTGGAACAGCAGCTAGTCACTGGCCTTGGTTTAAGAAGATGGAAGATATTGTGGGCAATTCATTAGCCTTGAAAGGCGCGTCTGATGAAGATAGAAGCGGAAGCTCAATGGGGAATACTGTGAAGCCAGCTAGAAGGTATCCTCTGGTAACATATAACCCAGGAGTTCAGATTAATAACGTCAAATCAAAGGCTACATCAAACCCTAGATGGCGAAGAGTGGTTCTAAAAATCAGTGGTGCAGCTCTTGCCTGCACCGGTCCTAATAACATTGATCCAAAGGTAATCAATCTGATTGCAAGAGAAGTTGCAATGGCTTGTCGTCTTGGTGTAGAGGTAGCGATAGTTGTTGGGAGTCGGAACTTTTTTTGTGGCAGCACATGGGTAACTGCCACTGGTTTGGATAGAACCACTGCATATCATATAAGTATGATGGCGTCTGTGATGAACTCTGCTTTACTTCAATCGTCCCTGGAGAAAATAGGGGTGCAGGCACGGTTACAAACTGCAATATCGGTTCAGGGTGTCGGGGAGCCTTACAATCGTCAACGAGCCACCCGGCATCTAGATAAGGGAAGAGTGGTAATATTTGGTGGCATCGGTGCCACGCTTGGAAATCCACTTTTATCATCTGATGCATCTGCAGCCCTTCGAGCTATAGACATCAATGCGGAGGCAGTGGTGAAAGGAACAAACGTTGATGGTGTTTATGACTGTCATTCACAAGATAGTAACGTGACATTTGAGCACATATCATTTCAAGATTTGGCTTCTAGAGGTCTTACGTCAATGGATACAATGGCCCTTAACTTTTGTGAAGAGAACAGCATTCCAGGTCGAGATTCTTCTTCTCTCTCTTATCATGTTTAG
Protein Sequence:
- >AT3G10030.2|Arabidopsis_thaliana|Trihelix|AT3G10030.2
MASCDDDFSLLGDDQSNPNQHHHHHQVLHHTPYAPRRFNPKPSNQILLPHHQRNGDEDDENDVVVEASSAFHGHGVNPFTADENSNPYDDNNAAVDEDEDEDLGANRSRIGGVRVEKRQSQEELSDGGTTNGGEITPYGSFKRPRTSSSSAGEYRKDREEWSDAAIACLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCEKLSKSVEQCKNKIDNLKKRYKLERHRMSSGGTAASHWPWFKKMEDIVGNSLALKGASDEDRSGSSMGNTVKPARRYPLVTYNPGVQINNVKSKATSNPRWRRVVLKISGAALACTGPNNIDPKVINLIAREVAMACRLGVEVAIVVGSRNFFCGSTWVTATGLDRTTAYHISMMASVMNSALLQSSLEKIGVQARLQTAISVQGVGEPYNRQRATRHLDKGRVVIFGGIGATLGNPLLSSDASAALRAIDINAEAVVKGTNVDGVYDCHSQDSNVTFEHISFQDLASRGLTSMDTMALNFCEENSIPGRDSSSLSYHV