Gene Details:

  • Gene ID: AT1G54060.1
  • Gene Name: ASIL1, F15I1.14
  • Gene Family: Trihelix Family
  • Description: Trihelix Family protein
  • Species: Arabidopsis thaliana
  • Source: Trihelix family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  NP_564648.1  — 6B-interacting protein 1-like 1
  • Swissprot:  Q9SYG2  — ASIL1_ARATH; Trihelix transcription factor ASIL1
  • TrEMBL:  A0A178WDE2  — A0A178WDE2_ARATH; ASIL1
  • STRING:  AT1G54060.1  — (Arabidopsis thaliana)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0009733  — Biological Process — response to auxin
  • GO:0009793  — Biological Process — embryo development ending in seed dormancy
  • GO:0010029  — Biological Process — regulation of seed germination
  • GO:0010431  — Biological Process — seed maturation
  • GO:0048831  — Biological Process — regulation of shoot system development
  • GO:0005730  — Cellular Component — nucleolus
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0043565  — Molecular Function — sequence-specific DNA binding
  • GO:0044212  — Molecular Function — transcription regulatory region DNA binding

Family Introduction:

  • GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

Sequences:

CDS Sequence:
  • >AT1G54060.1|Arabidopsis_thaliana|Trihelix|AT1G54060.1
    ATGGAGGACGACGACGAGATTCAGTCAATTCCATCTCCGGGAGATTCTTCCCTTTCACCACAAGCTCCTCCTTCTCCGCCGATTTTGCCAACAAACGACGTGACGGTGGCCGTCGTGAAGAAACCACAACCGGGGCTTTCTTCTCAATCTCCGTCCATGAACGCTTTAGCGTTAGTGGTTCATACTCCTTCTGTAACCGGTGGTGGTGGTAGCGGAAACAGAAACGGACGAGGAGGAGGAGGAGGAAGCGGTGGTGGTGGAGGAGGAAGAGATGATTGTTGGAGCGAAGAAGCTACAAAGGTTCTAATCGAAGCTTGGGGAGATCGATTCTCTGAACCAGGTAAAGGAACTTTGAAGCAACAACATTGGAAAGAAGTAGCTGAGATTGTGAACAAGAGTCGTCAATGCAAATACCCTAAAACTGATATTCAGTGTAAGAACAGAATTGATACGGTGAAGAAGAAGTATAAGCAAGAGAAAGCTAAGATTGCTTCTGGTGATGGACCTAGTAAATGGGTTTTCTTCAAGAAGCTTGAGAGTTTGATTGGTGGTACTACAACATTCATTGCTTCTTCAAAAGCTTCAGAGAAGGCTCCTATGGGAGGAGCTCTTGGGAATAGCCGTTCGAGTATGTTTAAACGGCAAACTAAAGGTAATCAGATTGTGCAGCAACAACAAGAGAAGAGAGGCTCTGATTCGATGCGGTGGCATTTTAGGAAACGTAGTGCTTCTGAGACTGAGTCTGAGTCTGATCCTGAACCTGAGGCTTCTCCTGAGGAATCTGCTGAGAGTCTCCCACCTTTGCAACCGATTCAACCGCTTTCGTTTCATATGCCAAAGCGGTTGAAGGTGGATAAGAGTGGAGGTGGAGGGAGTGGAGTTGGAGATGTGGCGAGGGCGATACTTGGATTTACGGAAGCTTATGAGAAGGCGGAAACTGCTAAGCTTAAGTTAATGGCGGAACTGGAAAAGGAGAGGATGAAATTTGCTAAAGAGATGGAGTTGCAGAGAATGCAGTTCTTGAAAACTCAATTGGAGATAACACAGAACAATCAAGAAGAGGAAGAGAGGAGCAGGCAGCGAGGAGAAAGGAGGATCGTTGATGATGATGATGATCGCAATGGCAAGAATAACGGCAATGTAAGTAGCTGA
Protein Sequence:
  • >AT1G54060.1|Arabidopsis_thaliana|Trihelix|AT1G54060.1
    MEDDDEIQSIPSPGDSSLSPQAPPSPPILPTNDVTVAVVKKPQPGLSSQSPSMNALALVVHTPSVTGGGGSGNRNGRGGGGGSGGGGGGRDDCWSEEATKVLIEAWGDRFSEPGKGTLKQQHWKEVAEIVNKSRQCKYPKTDIQCKNRIDTVKKKYKQEKAKIASGDGPSKWVFFKKLESLIGGTTTFIASSKASEKAPMGGALGNSRSSMFKRQTKGNQIVQQQQEKRGSDSMRWHFRKRSASETESESDPEPEASPEESAESLPPLQPIQPLSFHMPKRLKVDKSGGGGSGVGDVARAILGFTEAYEKAETAKLKLMAELEKERMKFAKEMELQRMQFLKTQLEITQNNQEEEERSRQRGERRIVDDDDDRNGKNNGNVSS