Information report for Ahy010169
Gene Details
Functional Annotation
- Refseq: XP_016176448.1 — trihelix transcription factor GTL2
- TrEMBL: A0A444XN72 — A0A444XN72_ARAHY; Uncharacterized protein
- STRING: XP_004495792.1 — (Cicer arietinum)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Cicer arietinum: XP_004495792.1
- Glycine max: Glyma.10G161200.1.p, Glyma.20G224000.2.p, Glyma.20G224000.1.p, Glyma.03G246000.2.p, Glyma.03G246000.1.p, Glyma.19G243500.2.p, Glyma.19G243500.1.p
- Gossypium arboreum: Cotton_A_14977_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A11G2296
- Juglans regia: WALNUT_00017100-RA, WALNUT_00032082-RA
- Lotus japonicus: Lj5g3v1415190.1, Lj0g3v0055089.1
- Manihot esculenta: Manes.09G154300.1.p
- Medicago truncatula: Medtr1g081180.1
- Prunus mume: XP_008218241.1
Sequences
CDS Sequence:
- >Ahy010169|Arachis_hypogaea|Trihelix|gnl|UG|Ahy#S59553225
ATAACACCAACAAGAACAACAACAACAACCACCTCATCACAAATCCCTCTTCATCATCATTTACCTTTCCCTCTCCCTCTCCATCATCCTTCTTCTAATCCCACATCATCAAACCCCAACAACAACACTAACACTTTCCATCCTACACCTTTTGATCCTTATCATCATCATCACCACCAATTGCAGCTTCACCAAGTTCATCATCAACACCCCAGTATCTTGCACCCATCATTACACCTTCACCAACACCACAACAACAATAACAAACATCATCATCATGATGAAGACCGGGAAGAAAACAACGCTAGCAGTACTTCCACTACTACTGTGCCAATGAATTTTGAAATTGAAAGAGATCATGAGAGGCAGCAAATGCCTCCTCCTCAGCTCATTGATCCTTGGAGTAATGATGAAGTACTTGCTCTCTTGAGGATCAGATCTACCATGGAGAGTTGGTTCCCACAACTCACTTGGGAACATGTCTCNTGCAGGAAGATGGCAGAGCTTGGATATAAGAGGAGTGCTGAGAAGTGCAAAGAGAAGTTTGAAGAAGAAAGCAGATATTTCAGCAGCAACATTAACTTCACCAACAAAACCATTACTCCTCCTCCTACTACTACTACTGGTTACCGCTTTCTTAGTGAACTTGAAGAGCTTTATCATCAACAAGATAATAGTGATCATCATCATCAACAAGAAGTGGTGGTAGTGGAGAAGCAACCAAGTAGTACTGACGGGCAAGAAGACAAGGTAGTCATGGACCAAGCATTGGGAGAAGATGATAAGGAGAATGATGAAGAGGTTGTTGCTGGGGCGGCCACGGTGGTGTTGCCGGAGAAGATTATTACGACAAAAACAAAGGAGAGGAAGAGGAAGAGGGGTGGTGGAGATGGTGACGGCAACGGCGACCGCGTGAGGTTTGAGATGTTCAAAGGTTTTTGTGAAAGCATTGTGCACAAGATGATGGAGCAACAAGAAGAGATGCACAACAAGTTAATAGAAGATATGGTGAGAAGAGATGAAGAGAAGCTTGCAAGAGAAGAGGCATGGAAGAAGCAAGAGGTGGAGAGAATGAACAAGGAGCTTGAGATCATGCAACAGGAACAAGCCATTGCTGGTGATAGACAAGCAAACATCATTGAGTTCTTGAAGAAATTTGCCCCAGAAATTCAAACCCTTGTTTGTGTTGAAGAAGATCATGATGATCACAATAATAATGGAAGAAACAAATTAGTGAAGGTAACAAATAATAATAACAATGTTGAACACAATGGTTCAAATTTGTTGTTGCATTCCCAAAACCCTAATCCTCCATCATCACCTTCTTCTTCTTCTGCTGTGATTGTGAATAACCAAAATGGTGTTGTTGTTGCTGCTGCTTCTTCTTCAACAAACCCTAGCTCAAGTCCTATGATACAAGCTGGCAAGAACCCTAATAGTACTTATCTCAACAATGATAGCCCAATAGTAGAGGCGGACTCGGCGGCAAAGAAGGCAGCTGCCACTACCGCGAACTGCGAGAAAGATGAAATTGGAAGAAGATGGCCAAAAGATGAAGTGTTGGCACTGATAAACCTGAGGTGCAACACGCAAGTGAGCAGCAACAATGATGAAAATGGGAGAGAAACTCACAAGGCTCTTCCATTGTGGGAGAGAATCTCACAAGGGATGGTGGAATTGGGGTACACAAGGAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATGCTAACAAGAAGAGGTCCCTTGATTCAAGAACTTGTCCCTATTTTCATCTTCTCAGTAGCCTCTATAGCCAAGGGAAGCTTCTTCTCCAACCTGAGAAGCAAGAAACTACTACTAATAATAATGATAACCATGGAAAAAAAATGGTCGGAGATCATCAAACTTCTTCACATCAAATGGGGTCTGCTATTGCTGCTGATGATAATCATGATCATGGAGGTGAGAATAACAATAATAACAAAGCTTTGATGCAAGCN
Protein Sequence:
- >Ahy010169|Arachis_hypogaea|Trihelix|gnl|UG|Ahy#S59553225
ITPTRTTTTTTSSQIPLHHHLPFPLPLHHPSSNPTSSNPNNNTNTFHPTPFDPYHHHHHQLQLHQVHHQHPSILHPSLHLHQHHNNNNKHHHHDEDREENNASSTSTTTVPMNFEIERDHERQQMPPPQLIDPWSNDEVLALLRIRSTMESWFPQLTWEHVSCRKMAELGYKRSAEKCKEKFEEESRYFSSNINFTNKTITPPPTTTTGYRFLSELEELYHQQDNSDHHHQQEVVVVEKQPSSTDGQEDKVVMDQALGEDDKENDEEVVAGAATVVLPEKIITTKTKERKRKRGGGDGDGNGDRVRFEMFKGFCESIVHKMMEQQEEMHNKLIEDMVRRDEEKLAREEAWKKQEVERMNKELEIMQQEQAIAGDRQANIIEFLKKFAPEIQTLVCVEEDHDDHNNNGRNKLVKVTNNNNNVEHNGSNLLLHSQNPNPPSSPSSSSAVIVNNQNGVVVAAASSSTNPSSSPMIQAGKNPNSTYLNNDSPIVEADSAAKKAAATTANCEKDEIGRRWPKDEVLALINLRCNTQVSSNNDENGRETHKALPLWERISQGMVELGYTRSAKRCKEKWENINKYFRKTKDANKKRSLDSRTCPYFHLLSSLYSQGKLLLQPEKQETTTNNNDNHGKKMVGDHQTSSHQMGSAIAADDNHDHGGENNNNNKALMQA