Gene Details:
- Gene ID: Aco017242.1
- Gene Family: Trihelix Family
- Description: Trihelix Family protein
- Species: Ananas comosus
- Source: Trihelix family gene from PlantTFDB
Protein Features:
Gene Ontology:
- GO:0000023 — Biological Process — maltose metabolic process
- GO:0005983 — Biological Process — starch catabolic process
- GO:0006508 — Biological Process — proteolysis
- GO:0007154 — Biological Process — cell communication
- GO:0007275 — Biological Process — multicellular organism development
- GO:0009624 — Biological Process — response to nematode
- GO:0009629 — Biological Process — response to gravity
- GO:0009706 — Cellular Component — chloroplast inner membrane
- GO:0004190 — Molecular Function — aspartic-type endopeptidase activity
- GO:0005363 — Molecular Function — maltose transmembrane transporter activity
Family Introduction:
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature:
- Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses. DOI: 10.1007/s00438-009-0507-x ; PMID: 20039179
Sequences:
CDS Sequence:
- >Aco017242.1|Ananas_comosus|Trihelix|Aco017242.1
ATGGCGCTCACTGCGGTGGCGCCGCCGTTGTCCCTCTGCCTCCGCCAACCTCCGCCCTTCCTGCGCCCCGCCCCTCTCTCCTCCTCCGCTCCTCATCCTCCACCTCGGCTTCCTCTCCTTAAACCCCTCGCGTCCCTCCCCAAAGCCCTTAAACCCATAAACTCCTCCTCCCCCTTCCTTGGCCTCCGCCTCCGCCTCCGCCGCCGCCGCTCCCTCCTTTCCTACGCCGCCGCTTCTGATTCGGACTCTATCCCCTCCCCCACCGCCAAGGACGACGGCAAGTTCCATGAATGGGATTCCATGACCGCCAAATTCGCCGGCGCGGCCAATGTACCCTTCCTCCTCCTCCAGCTACCGCAGATCGTCCTCAACGCCCGCAACCTTCTCTCCGGCAATAAGACTGCCCTCTTTGCCGTCCCATGGCTCGGAATGCTTACCGGGTTACTTGGCAACCTCTCTCTTCTCTCCTACTTTGCAAAGAAGAGGGAGACGGAGGCCGTCCTCATCCAAACCCTCGGGGTTATCTCGACCTACGTGGTAATCGCGCAGCTCTGGATGGCAGGGGCCATGCCGTCGCCACAGTTTGTAGCCACGTCTGCGGTTGTGGCCACGGGGCTGGTCTTGAACTTCCTCAACTACTTTGCTTGGCTAAACGATAGGGTTTGGCTGCTGTGGGAGGACTTCATCACAGTCGGCGGCCTCTCCGTGCTCCCTCAGGTGATGTGGTCGACGTTTGTTCCCTTCATACCAAACAGCATCCTGCCTGGGATTATCTCAAGTGCCGTCGCGGTTGTGGCTGTTGTCATGGCTAGGATGGGAAAGCTTTCTGATGAAGGAACTAGGTTTGTTCGATCATTATCTGGGTGGACAGCAACACTTCTTTTCATGTGGATGCCTGTTGCACAAATGTGGACAAATTATCTCAATCCAAATAACATAAAAGGCTTGTCGGCTTTCACCATGTTGCTTGCAATGATCGGAAATGGTCTTATGATTCCACGGGCTTTATTTATTCGAGACCTGATGTGGTTCACTGGCTCTGCTTGGGCATCCTTTCTTCATGGTTGGGGTAACTTGGCCTGCATGTACTGCTTCAATAGTATTAGCAGGGAATTTTTCTTGGCAACAACAGTCGGCTTGCTTCTATGGCTAGGAACAATACTTTGGAGAGATACTTTTTCGGACCGTGATGGGGTCTGCTGCTTAACTGCTTCCTGCATTGCCGTTGGCATCATTCCAGTCGTCCCTTCGATCCGCCGCTATTTCCACCTCAATCGGCCACGATTCCTCTCCAATTTCTTCTCCACTTGCTCCCCTTCTCCTCCTACACTGTCGTCGCCCATCGATTTCGGCGACAGTAGGGAGGATATTAAGATGGGTGTTGATGGAGAGGTAGGCAGGGACAACGAGGGCAAAGGCGAGGTGGCGGAGGAGGACGAAAGGGATGTGGGCGAGGGCGAAGCAGTGGAGGACGCGGCGAGCCGGAGGGAGCGAAGCATCAGAGAAGAGGCAGAGGGCGCCGCCGGCGCCTCCTCTAAGGGCTTCACCGTGGAGCTCATCCACCGCGACTCCCCCAAGTCCCCTCTGTACAACCACTCGCAGACGCACTCGAACCGCCTCCGCGCCGCCGCTCGCCGCTCCCGCGCGCGCGCCGAGCTCCTCCACCGCACGCTGGCGCGGTCGGAGGGGAGGTCGCTCGAGTCGGAGCTGAAGCGCAGCACGGCGGAGTACCTGATGGCGATCAACGTGGGCACGCCGCCGAAGAGGATCCTGACCATCGCCGACACCGGCAGCGACCTCATCTGGTCCAACTGCGAGCCCTGCACCTCCTGCTTCCCCAGCGACGCCCCGCACTTCGACCCCTCCGCCTCCTCCACCTTCCGCTCCCTCTCCTGCGACTCCGACCCCTGCGCCGCCCTCCCCGGCACCGCCTGCGGCGACAACGACTCGTGCACGTACGTGGCCTCATACGGCGACGGCTCGCAGACCAGCGGCACCCTCGCGACCGAGACCTTCACCTTCCGCGCGGCGGCGGACGGCGGGAGCAGCGTGCGGGTCCCCAGCATCTCCTTCGGGTGCTCGGACGATTCGGAAGGCCTGTTTGATGGCCACTCGGGCGGCATCGTCGGGCTCGGCGGGGGCCCGCTCTCCCTCGTCTCGCAGCTGGGCTCCTCCATCGACGGCAGATTCTCCTACTGCCTCGTCTCCGCAGGGGCCAACCACTCCTCAAGCCAGCTCCGCTTCGGCGCCGACGCCGTCGTGTCCGGCAAGAACGCCGTGTCGACGCCGCTCGTGCCGGCCCTGTCGGGCACCTTCTACGTCGTGACCCTCGATGGCATATCCGTGGACGGCGTCGACCTGCCGATCGAGCAGGGGAACATCATCGTGGACTCCGGCACGACGCTGACCTTGCTCGCTCCGGCGGCGCTGAAGTCTCTGTCCCGCCAGCTGGAGAGCTCCATCAGCCTGCCGCGCGTGGACGACCCGCAGGGGACCTTCACTCTCTGCTTCGACGTCCACAAGGCGCCGCGGCACTTTGAGTTCCCAGATGTGACGTTCCATTTCGGGACGGCGCCCGTGAAGCTGCCCGCGGGGAACGCCTTTCTGCAGTTGGACGAGGGCACCGTCTGCCTCGCGATGATACCGGTCACCGGCAGCATCACATTCGCCATCTTTGGCAACATTGCCCAGCAGAACTTCCATATCGGGTATGATCTGATGATGCTCGGGGGAGGGGGAGGGAGGGGGAGGGAGGAGAGGGTGCCGCAGTGGGGCCCGCAGGAGACGAGGGAGCTGATCGGGATAAGGGGGGAGCTGGAGCGCCACTTCTCGGCGTCGAAGCGCAACAAGACGCTGTGGGAGGCGGTGGCCTCCCGCATGCGGGACAGGGGCTACCGCCGCACCCCCGACCAGTGCAAGTGCAAGTGGAAGAACCTCGTCAACCGCTACAAGGGAAAGGAGACATCTGATCCAGAGAACGGCAGGCAATGCCCCTTCTTTGAAGAGCTCCATGCGGTCTTCACTGAGCGTGCCAGAAACATGCAGCGCCAGCTTCTCGAATCTGAACACCCTGGAGGTCCCTCTTCTACTCTGAAGAAGAAACCCAAGAGGTCTGGCGGCGACAGATCCTCCGATGAACTATCTGATGAAGACAATGATGAAGAGGAGGAAGAAGAAGGAGACAGTGGTGACGAACGCCCTGCAACAAGCAGAAAGAGAAAAGCTGAAAGGGATAAACCAAAAGGCGCGACTTCTTCTACAAGCAACAGCATCCATGATCTGCTGCAGGGCTTTCTGCAACAGCAGCAGAGGATGGACGTGCAGTGGCGGGAGATGATGGAACGGAGGGCTCACGAGCGGCTTTTGTTCGAGCAGGAGTGGCGGCAGTCCATGGAGAAACTGGAGAGAGAAAGACTGATGATGGAACAAGCATGGAGGGAGAGGGAGGAGCAGAGGAGGATTAGAGAGGAGATGCGGGCGGAGAAGAGGGACGCGCTCTTGACCACTCTGTTGAATAAACTCTTGCAAGATAATCTATAA
Protein Sequence:
- >Aco017242.1|Ananas_comosus|Trihelix|Aco017242.1
MALTAVAPPLSLCLRQPPPFLRPAPLSSSAPHPPPRLPLLKPLASLPKALKPINSSSPFLGLRLRLRRRRSLLSYAAASDSDSIPSPTAKDDGKFHEWDSMTAKFAGAANVPFLLLQLPQIVLNARNLLSGNKTALFAVPWLGMLTGLLGNLSLLSYFAKKRETEAVLIQTLGVISTYVVIAQLWMAGAMPSPQFVATSAVVATGLVLNFLNYFAWLNDRVWLLWEDFITVGGLSVLPQVMWSTFVPFIPNSILPGIISSAVAVVAVVMARMGKLSDEGTRFVRSLSGWTATLLFMWMPVAQMWTNYLNPNNIKGLSAFTMLLAMIGNGLMIPRALFIRDLMWFTGSAWASFLHGWGNLACMYCFNSISREFFLATTVGLLLWLGTILWRDTFSDRDGVCCLTASCIAVGIIPVVPSIRRYFHLNRPRFLSNFFSTCSPSPPTLSSPIDFGDSREDIKMGVDGEVGRDNEGKGEVAEEDERDVGEGEAVEDAASRRERSIREEAEGAAGASSKGFTVELIHRDSPKSPLYNHSQTHSNRLRAAARRSRARAELLHRTLARSEGRSLESELKRSTAEYLMAINVGTPPKRILTIADTGSDLIWSNCEPCTSCFPSDAPHFDPSASSTFRSLSCDSDPCAALPGTACGDNDSCTYVASYGDGSQTSGTLATETFTFRAAADGGSSVRVPSISFGCSDDSEGLFDGHSGGIVGLGGGPLSLVSQLGSSIDGRFSYCLVSAGANHSSSQLRFGADAVVSGKNAVSTPLVPALSGTFYVVTLDGISVDGVDLPIEQGNIIVDSGTTLTLLAPAALKSLSRQLESSISLPRVDDPQGTFTLCFDVHKAPRHFEFPDVTFHFGTAPVKLPAGNAFLQLDEGTVCLAMIPVTGSITFAIFGNIAQQNFHIGYDLMMLGGGGGRGREERVPQWGPQETRELIGIRGELERHFSASKRNKTLWEAVASRMRDRGYRRTPDQCKCKWKNLVNRYKGKETSDPENGRQCPFFEELHAVFTERARNMQRQLLESEHPGGPSSTLKKKPKRSGGDRSSDELSDEDNDEEEEEEGDSGDERPATSRKRKAERDKPKGATSSTSNSIHDLLQGFLQQQQRMDVQWREMMERRAHERLLFEQEWRQSMEKLERERLMMEQAWREREEQRRIREEMRAEKRDALLTTLLNKLLQDNL*