Information report for Achn179621
Gene Details
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Functional Annotation
- Refseq: XP_002269943.2 — PREDICTED: trihelix transcription factor ASR3 isoform X1
- Swissprot: Q8VZ20 — ASR3_ARATH; Trihelix transcription factor ASR3
- TrEMBL: A0A2R6REL0 — A0A2R6REL0_ACTCH; Trihelix transcription factor
- STRING: VIT_01s0150g00050.t01 — (Vitis vinifera)
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0050777 — Biological Process — negative regulation of immune response
- GO:0071219 — Biological Process — cellular response to molecule of bacterial origin
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0042803 — Molecular Function — protein homodimerization activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Achn179621|Actinidia_chinensis|Trihelix|Achn179621
ATGGCGCTTGAGCGTTTGTCTCTCGGCTCAACACCCGTAGACGCCGTCCCTAACGGCGGCGACGACCGCAAAACTACCGGAGACGACGGCCACAGAGCGCCGAGGCTGCCACGTTGGACAAGGCAAGAGATTCTGGTGCTGATACAAGGAAAGAGGGTGGCGGAGAACCGGGGTCGAAGGGGAAGGACCGTGGGCATGGCTTTCGGGGCTGGTCAAGTCGAGCCCAAGTGGGCGTCGGTGTCGTCGTACTGCAAGCGGCATGGGGTGAACCGGGGACCGGTTCAATGCCGGAAGAGGTGGAGTAATTTGGCCGGAGACTATAAGAAGATCAAAGAATGGGAATCGCAGATTAGGGAAGAGTCGGAGTCGTTTTGGGCCATGAGGAACGATTTGAGGAGAGAGAGGAAGTTGCCGGGCTTCTTTGACAGAGAGGTCTACGATATACTCGACGGCGGTACGATACCGTCAGTTACTCCGACGGGTCTGGCTTTGGCTCTGGCTCCATCGAAGGAGGAGGCGGTGGAGGAGGTTGAGACCGAAACCGTGTTCGATAGCGGGCGGAGCGCGGCCGCGGAGGATGGATTGTTTTCGGATTTTGAGCAGTCGGCACAAGAAGAGGCTGGTGGTGAGAGCCATGGCAAGGATTCTCCGCCTGCCAAGAAGGTTCGCACAACGACTGTACCCGACTCTATTCCAATTTCAGCCCATCCCTATCCCCAAAAATTAATGGAGCAACACTGGCTCGTATCTCAGTTAGGCCAAATTCACGGGAAACGACAAGCCTCTGACCCCGAGACGGGAGCTACTTCTGAGGAAGGGTGCAAGCGGAGACGGTTTGGTGCAGATAGAGACGAGGAAACAAACACCCTGCAGTGTCAGTTGATCAAAGTTTTAGAAAAGAATGGAAGAATGGTATGTGCACAACTTGAATCTCAGAACACCAATTCTCAATTGGATAGGGAGCAACGCAAAGACCATGCGAATAGCTTAGTTGCTGTTCTTAATAAACTGGCAGATGCTTTGGGCAGAATTGCTGATAAGCTTATTGCCATTATAGGTAGTGTAGAGACGATAAATCATGGGAAGTTATCGGCTTTTATTTATCTTATTGTCATGCCGTGTAATTCAATTAGATATCAAGAAATCTGGCCCCCAAATCCTGATACAATTCAGCATTTGATTGACGCCTACAGACACCAATCGAATGAAGATCGTATCAAGAGGAGCCTTAATTTGTCCAATTTTTTCGAGGACCGAAACCAAAAGATGGAACATGCACTTGTGAAACTACGTCAGAGAAATAACGAGGCCACATATTCCACATGGGATGACCGTTACAATGACCTGTCAAAGGAACAACTGAGAGATTTGGAAGGTATGTTGGACGAAAAGCTTCAAAGTGCCAAGGCTAGAGTTGCATTCATGAAGGGTACTCATAATGCATTCACCTCCCAAAACCATTCTTGTGTAGGCTTGTTTGGGACAGTAAGCACACAATTAGAGCCACAGCCTATTTCTTTGCTGAATCAGAATGAAGTTGACATCCCTATTCATTACCATTTCAATCAGATCCACCAAGGTCTTCAGCTGGATGCCAAGGCCATGGAATATTCGATGAAGATGATCTCAATGAACAATAACTACTACACTGAACTTGGTGGAGTGTCTAACAGCACCTTCCTAGGTAATCCACTGGTTTGTTATGATCCAATGATGCCTGGGATGCTTGAGAATAGGGTCGTTAACAATCCTTCTTCCCCTATGGGCTACTACAATCCAAGTATCCAGACAATGTCACCGTATCTGCAATACCTGAAGATGGAAAGTGCTAACGCTTCATCTAGCGTGCATACATCTCATATGGACAAGTACAGTGAAGCGAGGGATTTCAGATGA
Protein Sequence:
- >Achn179621|Actinidia_chinensis|Trihelix|Achn179621
MALERLSLGSTPVDAVPNGGDDRKTTGDDGHRAPRLPRWTRQEILVLIQGKRVAENRGRRGRTVGMAFGAGQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREESESFWAMRNDLRRERKLPGFFDREVYDILDGGTIPSVTPTGLALALAPSKEEAVEEVETETVFDSGRSAAAEDGLFSDFEQSAQEEAGGESHGKDSPPAKKVRTTTVPDSIPISAHPYPQKLMEQHWLVSQLGQIHGKRQASDPETGATSEEGCKRRRFGADRDEETNTLQCQLIKVLEKNGRMVCAQLESQNTNSQLDREQRKDHANSLVAVLNKLADALGRIADKLIAIIGSVETINHGKLSAFIYLIVMPCNSIRYQEIWPPNPDTIQHLIDAYRHQSNEDRIKRSLNLSNFFEDRNQKMEHALVKLRQRNNEATYSTWDDRYNDLSKEQLRDLEGMLDEKLQSAKARVAFMKGTHNAFTSQNHSCVGLFGTVSTQLEPQPISLLNQNEVDIPIHYHFNQIHQGLQLDAKAMEYSMKMISMNNNYYTELGGVSNSTFLGNPLVCYDPMMPGMLENRVVNNPSSPMGYYNPSIQTMSPYLQYLKMESANASSSVHTSHMDKYSEARDFR*