Information report for AA15G00159
Gene Details
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Functional Annotation
- Refseq: NP_188034.1 — sequence-specific DNA binding transcription factor
- Swissprot: Q9LJG8 — ASIL2_ARATH; Trihelix transcription factor ASIL2
- TrEMBL: A0A178V8Z7 — A0A178V8Z7_ARATH; ASIL2
- STRING: AT3G14180.1 — (Arabidopsis thaliana)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >AA15G00159|Aethionema_arabicum|Trihelix|AA15G00159
ATGGAGGAAGACGACGAAACTCAGTCGCTACCGTCTCCGGGAGGTTCTCTTTCACCAATTCCTTCTTCTCCGCCGAATGACGACGTGACGATAGCCGATGTGAAACCACCTGTTTCATCTCAATCTCCTGGTGACGCTTTAGCTTTGGTTGTTCATACTCCTGCTGTTACCGGTGGTGTTAGCGGTAGCAGAAACGGACGAATCGGAGGCGGAGGTAGCGGGGGAGGAAGAGATGATTGTTGGAGCGAAGAAGCTACAAAGGTGTTGATCGATGCGTGGGGAGAGAGGTTCTCTGAGCCAGGTAAAGGAACTTTGAAACAACAACATTGGAAAGAAGTAGCTGAGATCGTGAACAAAAGTCGACAATGCAAATATCCAAAAACTGATATACAGTGTAAGAACAGGATTGATACTGTGAAGAAGAAATATAAGCAAGAGAAAGCTAAAATCGCCTCTGGTGATGGACCTAGCAGATGGATATTCTTCAAAAAACTTGAAAGCTTAATTGGAGCTAACACAAATTCAAAGATCCATAACAGTGAAGGTGGTGGAAGATCCTCTGATAAAGCTCCAATGGGAATTCTTATGAACAGAGGCTCAAATCTGTATAAACATCAAGCTAAGGGAACACAAATGACACAACAAGGAGATGTGAAAAGAAGCGGCGATTCAATGCGTTGGCATTTCAGGAAAAGAAGTGCTTCTGAGACTGAATCAGAATCTGAGCCTGAACCTTCCGGTGATTCAGCTGATAGTCTACCACCGCAGCCATCACTACCAGTCCCTAAGCGGGTGAAGATTGAGAAGACCGGAGGTGGAGGTGGAGGAGGAGGTAGTGGACTTGGAGATATAGCTAAGGCGATATTGGGATTCACTGAAGCTTATGAGAAAGCAGAGACTGCTAAGCTTAAGCAAATGATGGAATTAGAAAAAGATAGAATGAAGTTTGCTAAAGAAATGGAATTGCAGAGAATGCAGTTCTTGAAAACTCAATTGGAGATAGCACAGAGCAGTCAAGATGAGGAAGGAGGAGAAAGAAGAATGTTGAGGAATAATCTTGATGATGCTCGGAGTATGAAGAATAATGGCGATATGGGTTTCCTACACAAGCTGTGGGATGAAACGGTGGCCGGACCGGCGCCGGAAAATGGTCTCGGTAAGTTGAGAAAGCCCAATTCTTTATCCACCGTCCGATCTCCTCCTCTCTCCGATGATCAAGTCACCAGATGCATTGTTGTCACCAGAGGAGGGAATAATGGTCTCCGGAGATTGAAGATGGAACCGGGTCGTGTTCCGGATTCTCCAACCGGGTCAAATAGCAACCCGGGAACGCCGTTGACTCCCGGGACTCCATACTTTGGACCATTCACTGCCGGTAAAGAGCCAATCTCCGGCGAAGACGATGAAGAATTTCGATCGCACGCGTCTCCGGTGGATTCCGATTCATCTTCTCCGCCGGCGGGAAGGATCACGGTGACGGTTGCTTCTGCTGGACCACCGTCTTCTTCATCGTTACACGACTCGAACGCGTTGGCCTTGGCGCTACCGATGAAATCCAGTGGTGGAGGGCGAAGCAGAGGTAATGGAAGTAATGGTAGATCCGGCGGTGGTGGTGGTAGGGAAGATTCGTGGAGCGAGGGAGCTACAGCGGTGTTGATTGATGCTTGGGGGCAGAAGTATTTGGAGCTAAGTAGAGGTAATTTGAAGCAGAATCATTGGAAAGAAGTAGCGGAGATTGTGAGCAGTAATGATGATTACGGTAAAATTCCGAAGACTGATATTCAATGTAAGAACAGGATTGATACAGTGAAGAAGAAATATAAGCAAGAGAAGGCGAAGATAGCTTCAGGAGATGGTCCAAGCAGATGGGTTTTCTTTGATAAGCTTGATCGTTTGATTGGATCTACAGCAAAGATCCCAACTCCTTCTCCAGGTAGTGGAAGATTGCAAAACATTCCTGTTGGTATACCGCAAAACATTCCTGTTGGTATACCAACGAGAAACCCTTCAAATTTGTATAATCAGCTAGCAAAATCTACTAAGCCGCCGTTTGATCGTCTTATGGGAGCTACTGCTAGGATTCCAAGTGCTTCCCTTGGCGGCGGTGGAAGTTACGGAGATGTACCGACGGGAATTCCGGTGAATTCAAATATGTTTGGGCAACGAGGGAGGACATCAGCATCACCAGTACCTCGCCAAGGGATTGTGGAGAGATGCAGTGAGTCAAAACGTTGGCGTTTCAAGAAGAGAAACGGGTTAGATTCAGACTCAGAGTCTGATACTGAGATGTCTGCTGATTCAGCTGATAGTTTACCGCCTCCACCGCTCACGAAGAGGGTAAAGATAGAGAAGGAGAAAGTGGTTGATGAAAAGGTAGACAAGTGGAAGGAACTGAGTCTAGTGATTAAGAGATTTGGTGAAGCTTATGAGGAGATAGAGAATGCTAAACTACAACAATTTGTGGAAATGGAGAAGACAAGACTAAAGTTCATGAAGGAAATGGAGTTGCAGAGAATGCAATTCTTTATCAAGACACAAATGGAGATATCTCGGCTTAAACAACAACAAGGAAGAAGAAACGGAGTTGGAGACACCAGTAGGGATCATCATCACAACGACGAAAACAAGAACAACAAAAAGAACATCAACACT
Protein Sequence:
- >AA15G00159|Aethionema_arabicum|Trihelix|AA15G00159
MEEDDETQSLPSPGGSLSPIPSSPPNDDVTIADVKPPVSSQSPGDALALVVHTPAVTGGVSGSRNGRIGGGGSGGGRDDCWSEEATKVLIDAWGERFSEPGKGTLKQQHWKEVAEIVNKSRQCKYPKTDIQCKNRIDTVKKKYKQEKAKIASGDGPSRWIFFKKLESLIGANTNSKIHNSEGGGRSSDKAPMGILMNRGSNLYKHQAKGTQMTQQGDVKRSGDSMRWHFRKRSASETESESEPEPSGDSADSLPPQPSLPVPKRVKIEKTGGGGGGGGSGLGDIAKAILGFTEAYEKAETAKLKQMMELEKDRMKFAKEMELQRMQFLKTQLEIAQSSQDEEGGERRMLRNNLDDARSMKNNGDMGFLHKLWDETVAGPAPENGLGKLRKPNSLSTVRSPPLSDDQVTRCIVVTRGGNNGLRRLKMEPGRVPDSPTGSNSNPGTPLTPGTPYFGPFTAGKEPISGEDDEEFRSHASPVDSDSSSPPAGRITVTVASAGPPSSSSLHDSNALALALPMKSSGGGRSRGNGSNGRSGGGGGREDSWSEGATAVLIDAWGQKYLELSRGNLKQNHWKEVAEIVSSNDDYGKIPKTDIQCKNRIDTVKKKYKQEKAKIASGDGPSRWVFFDKLDRLIGSTAKIPTPSPGSGRLQNIPVGIPQNIPVGIPTRNPSNLYNQLAKSTKPPFDRLMGATARIPSASLGGGGSYGDVPTGIPVNSNMFGQRGRTSASPVPRQGIVERCSESKRWRFKKRNGLDSDSESDTEMSADSADSLPPPPLTKRVKIEKEKVVDEKVDKWKELSLVIKRFGEAYEEIENAKLQQFVEMEKTRLKFMKEMELQRMQFFIKTQMEISRLKQQQGRRNGVGDTSRDHHHNDENKNNKKNINT