Information report for 68041
Gene Details
Functional Annotation
- Refseq: XP_024540996.1 — trihelix transcription factor ASIL2-like
- TrEMBL: D8QRJ4 — D8QRJ4_SELML; Uncharacterized protein (Fragment)
- STRING: EFJ36787 — (Selaginella moellendorffii)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Actinidia chinensis: Achn360641
- Cajanus cajan: C.cajan_28489
- Daucus carota: DCAR_011831
- Musa acuminata: GSMUA_Achr5P09160_001, GSMUA_Achr1P11500_001, GSMUA_Achr1P27460_001
- Vitis vinifera: GSVIVT01016703001
- Ziziphus jujuba: XP_015881243.1
Sequences
CDS Sequence:
- >68041|Selaginella_moellendorffii|Trihelix|68041
ATGGAGTCTGGTCGTCTTTATTTTGATACTACTTCTGTTTGTCGTGGGAACAACAGCATGAATATGTTGTACCTTGGGAATGCTGATCTCAGTTTTCGAGGAAGATCAATGATGAGCATGGAAGAAGGCTCAAAGAGGAGACCTTTCTTTAGCTCGCCAGATGAACTGTATGATGAGGAGTATTATGAGGAGCAGTCGCCGGAGAAGAAGCGCCGTCTCACTTCCGAGCAGGTACATCTGTTGGAGAAGAGCTTTGAGGAAGAGAACAAATTGGAGCCAGAGAGAAAGACCCAATTGGCCAAGAAGCTAGGGTTGCAACCTAGGCAGGTGGCAGTTTGGTTTCAGAACCGTAGGGCTAGGTGGAAGACCAAACAACTTGAAAGAGACTATGATGTTCTTAAGTCTTCCTATGATTCCCTACTTTCAACATATGATTCCATTGTTAAGGAGAATGAGAAACTCAAATCTGAGGTGGTATCCTTAAATGAGAAGCTTCAAGTTCAAGCTAAAGAGATGCTAGGAGAACCTTTGTTAGACAAGGAAGCTAATCCACTACCGATCGAAATAGCACAAATTTTCAGCATCAAGGTGGATGACCACATGAGTGCTGGAAGTGTTGGAAGTGCAGTGGTGGACGAGGGTAGTCCCCATGTCGTTGTTGACAGTGTTGATTCTTACTTTCCAGCTGACAACTATGGTGGATGTGTGGCTCCAATTGAAAGAGTTCAATCAGAGGAGGATGATGGGAGTGATGATGGGAGAAGTTACTTTAATGTGTTTGTTGCATCTGAAACTGAGCAGCAAAACCATGGAGAGGGGGAGGCATTGAATTGGTGGGGAAATATGTATTATGTTGCATAA ATGAGCATCACTGTTGAAACCGATGACATGATGACATCCAAAGTAGACGTGGATTCGCCCGACGAAGCTACTGGTGGAGTAAATGCCGGTGGAAGTGAACCACTTAAAAAAGGTCCCTGGACTTCCGCGGAAGATGCAATTTTAATGGATTACGTCATGAAACATGGTGAGGGGAATTGGAATGCCGTCCAGAAGCAATCAGGACTTGCTCGTTGTGGTAAAAGTTGTCGTCTGCGGTGGGCAAATCACCTGAGACCAGATTTAAAGAAAGGTGCATTTACTCCAGAGGAAGAGCGGCGAATAGTTGAGTTGCATGCTAAGATGGGAAACAAATGGGCACGAATGGCTGCTGAGTTGCCTGGCCGCACAGATAATGAGATAAAGAACTACTGGAACACCAGGATAAAGCGACATCAGCGTGCCGGCTTGCCAGTTTACCCTCCAGATATTTGTTTCTTGGCAAGTCAGAACAAACAAAATGAGGAGTTGAGTGCATTCTCCTCTGCAGATGCACAAAATCCTGATGTCTCGGGAACTAATGATTTTGATATTCCTGCTGTAGAGTTCAAAAATTTGGAACTCAATCGGCCATTATATCCACCACCACTCTTTGAAATTCCTTCTAATAGCCTGCTCGATATTACGGTAAGTAGCTTTCTCGCCCAGGGTCATAGTCCTCCCTACAATAGTACGTCTTTCCTTTCGACAATGCATCCATCTAAGCGTATACGAGGATCAGAATCCATGTTCGGTTCAAATGGTGGTTCTTTGCTTGGTCAGCCCTTGGGGTTTTCTTCATATAATAATCATAATGTAACATATGATGATCACCTACCATTCTCGAGTATTGTAATTCCAGGCAGCCATGCCCCTTTAAATGGCAATTCCTCTTCTTCGGAGGAGCTCCCTTCACTCCAAAATCAGACGGCGAATTGGGGCCCACCATCTTCCCCTCTTCCTTCACTAGAGTCCATTGATACTCTGATTCATTCCCCTCCGGCTGGACACAGCGAATCGGGTAGCGATCTGTCGCCTAGGAACAGTGGTTTATTGGACGCTATGCTTTACGGATCACATACTATGAAAGCTTCAACCGATAACTCACACCAAGAGAAGGAGACGTTTGGTGATGCAGTCGACAATTCTTATGCCGATCCAATCTCTCCTTTGAGTCATTTCTCTGCATCAGTGTTTAGCGAATATGCCCCTATCGACGGAAGCTCATTACATGAGTTCCCGTCGTTAGCCACAATGCCAGGATGCAAAGTAAAGCAAGAGAATGTTGCCACATCATCAGGGCAAGCTTGTGGACGCGATTCTTGTACGTGGGATGCCATGTCCACTGTGTAG CCAGGCCACGGCCGTGACGACGCGTGGACGGAGGGGGCCACGCTGGCGCTCATTGACGCTTGGGGGGAGAGGTATCTCCATCTCAACAGGGGGAATCTCAAGCAGAAGCATTGGCGAGAGGTGGCTGACGAGGTGACCAAGAGGTCGTGCTTGGACGAGAGCTCCAGCGGGAGAAGTGGCAAGAGCGATGTCCAGTGTAAGAATCGCCTAGATACGCTCAAGAAGAAGTATAAGATCGAGAAGGCGAGGCTGGCGAGCGAGGGGAGCCCCAGTAAGTGGCCATTTTTCGTGAAGCTGGACGAACTCATTGGTCCATCGAAGAAAGGGAAGAAGAGGTCGACTCCTCCGCCATCAAACAACGGCATTGCCCCGGCCGCCGGCGCCGGCGCCGCTCTCACTGCTACTCCAGTTAGCAGAGATCAGTCGAGGAACCATCGCCAGCAGCAAGCCCAGCAAGCGCAAGCGACGAGCAACGATTCCTCCAGCCGAGACTTCAAGGATCTGGCGAGGGCCATTATCAAGTTTGGGGAGGTTTACGAGCGGATCGAGAGCGCCAAGCAGCAGCAGCTCATGGATCTGGAGCGGCAGCGCATGGAGTTTACCAAGGATCTGGAGCTCCAGAGGATGCAGCTCTTCATGCAAACGCAGGTGGAGCTAGCCAAGATGAAGCACGGCAAG
Protein Sequence:
- >68041|Selaginella_moellendorffii|Trihelix|68041
PGHGRDDAWTEGATLALIDAWGERYLHLNRGNLKQKHWREVADEVTKRSCLDESSSGRSGKSDVQCKNRLDTLKKKYKIEKARLASEGSPSKWPFFVKLDELIGPSKKGKKRSTPPPSNNGIAPAAGAGAALTATPVSRDQSRNHRQQQAQQAQATSNDSSSRDFKDLARAIIKFGEVYERIESAKQQQLMDLERQRMEFTKDLELQRMQLFMQTQVELAKMKHGK