Information report for 676788946
Gene Details
Functional Annotation
- TrEMBL: A0A0D3DMD4 — A0A0D3DMD4_BRAOL; Uncharacterized protein
- STRING: Bo8g046100.1 — (Brassica oleracea)
- GO:0000413 — Biological Process — protein peptidyl-prolyl isomerization
- GO:0006457 — Biological Process — protein folding
- GO:0006979 — Biological Process — response to oxidative stress
- GO:0003755 — Molecular Function — peptidyl-prolyl cis-trans isomerase activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Brassica napus: GSBRNA2T00058958001, GSBRNA2T00075735001
- Brassica oleracea: XP_013601310.1
- Brassica rapa: XP_009145223.1, XP_009108291.1
- Gossypium hirsutum: Gh_A12G1936, Gh_D12G2117
- Manihot esculenta: Manes.02G045500.1.p
- Populus trichocarpa: Potri.003G083800.1, Potri.001G150600.1
- Raphanus raphanistrum: RrC6250_p3
Sequences
CDS Sequence:
- >676788946|Sisymbrium_irio|Trihelix|676788946
ATGGGCTCCCGCGTCTCATATGCGGAGTCGCTGGCGACTAGCGGCTGCGACAAAGAATACAATCAGAAGAAAAAGTCTCTAGTCGCCAGCGACTCTAAGACGAACAGGGCCATATACTCAGCAAAAACTAATTGTGATCAACAACAATTTTTCAACAATTTAAATCTCTTAGAAAATCAGGGACGTGTTGATGGAGCCGGGTGTTGCCGTGGAGTCGATAATCTGGAGCTTTGGGGTCCGGCGGTGAAGTGGGGGACGGATTTCAAGTTTGATAAGCCGGAAGAATGTTGTAAAGCGTGTAAAGTTATGTGCAGTGGCAACGACGGACCTTGCTTGTGCGATTCATGGGTGTTCTGTGGGAACAAAGAGGCTTGCGGGTCCAAGTTTGGAGAGTGTTGGTTGAAGAAGCAAAAAGATGTCTTGGTGCCTGATAAACAGGAAGGTGGGCAGAAAGTAATGTGGACATCGGGGCTTATCTTCGGTCAAGGCGAGGGCATTGTTGGTTTTGAGACGGAACACGGTGTACTTCATGTCAAACTTCACCCTGAGTGCGCTCCTCACTCGGTATACTACATTCTTAGTTTGTTAACTCTGCGCCACTGCGCAGGCTGCCAGTTTCATCGGGCAGAGAAACGGGGATCATATTGGGACGCAGAAGGCAATCATATAAACAATGCTCCCTATGGTCCACCATACGCCATGATTCAAGGAATACTCCAGCCCGAGGGAAACATGTTCACGCCGATCCCGACCGAGCACTGTCCAACCATAAGCCGTGGCTCTGTTGCGTGGGTCGGCTCGGGACCAGAATTCTTTATCAGTCTAGCAAACCATCACGAGTGGAAGCAATCTTACACTGTTTTTGGCTCTATTCTGCCAGAAGACATGGAGGTTGCTGAGAGGATTGCCGGTTTACCTACAAGAGCCGATGTCTGGAACAGCGTTGATGTCTCTGTGCTGGAGAAACCGGTATCGTTAACCGTAAGGAGAATGAAGTCGGGCCAAGAACAAGAAGAACCCGGGTCAGTTAAACGTATACGGCGGAGGTGGAGAAGGTGCGTCGGGTGCGCACACGTCACCAACTCCGCGGCGCACTTTAGTACAACTCTTCAACCCGGCCACCCTCCTCTCCTAACTTTTCTAACCTACGCCTCTCCTCCGCCTCTTTATTATCCATTAACCCACCGCTCGCTCTTTCTCCTATCCCTAATTTCCTCTACGCCGCCGCCATGTCAACCCCCGATGATGGATCTCCCGTCGCCATGGCCATCGATCCTTCCACCGCCGTCACCGTCGCGACAACCACGACTAGGAGAGTTCCTCCTCCGTGCTGGACCGACGAAGAGACCGCTGCGCTCGTCAACGCCTACAAAGACAAGTGGACCGCCGAAGTCAGCGATCCAATGCCGTCACAAGATCGAGAAGCTTCGTAAACGTTACCGCGGCGAGAAACAGCGGTCTCTTACCCGTCCAGGCAAGTTCTCTTCCTCTTGGGATTTGTTTCCCGTTTTAGATGCTATGGGATTCGCACCGGTGACTCCTGCCGCCGTTGAGCCTTACGATCCGGATCCGGATCATGACGATGAGAGTAACGGTTTAGATGGATTTAGGGTTAGATCGAAACGGTCGTCTGCGAAATTCGGTGGTTATTCTGATTCGCCTAGAGATGGAGGAGATGGATATGGGGTTAGATCTAGGTCAAAGAGTCAGATGAAGATGTACGGTGGTTTTAAGCCTGAGTTTGATTCGGATCACGATTCAGGAAGTGGATTTGGATTGAAAAGGAGATACAATGGGAATCCAAAGGTGGATTTCGATGCTGACTCGGATGATGAGATTTTGTTAGCTCCGAAGACAACTAGGCTTAAGGCTGCTTCCCATGGCCACGGTGGTGGTGGTGGTGGTGGGTTTCCGTTGAAGTCGTTTGGTGATCGGAGTTTCGGTTCTCATGGTGGGTTTAGTAAATCCAAGAACTTCATTAAACCTGAAGCTAATTTCTCTCCTGAGATGGATTTTGATGATGAGTTTGATGATGAGAGGGAAGGGTTCAACCCGAGAGTCCAACAACACTCTAGGAGCTCCTCGCGGGTCAATGGTTATACGAGGAAGGACGGGAGCTATCCCCGAAGCAACAACAACAACAACACTGGTGTCTCTAATGGGTATGGATCGTCTTCTAGGTTCAAGCATGAGCAGGCAGATGTTGAGTCAGACCCGATTGATGAAGTTGTATCTTCGGTCAAGATGTTGACTGAGATGTTTGTGAGGGTGGAGAATTCGAAGATGGAGATGATGAGGGAAATGGAGAAGACGAGGATGGAGATGGAGCTGAAGCATTGCCAGATGATGCTTGAGTCGCAGCAGCAGATCATTGGCGCGTTTGCTGAAGCCTTGAGCGAGAAAAAGAGCACAAACGCAAGGAGGACGGTTTCGTAG
Protein Sequence:
- >676788946|Sisymbrium_irio|Trihelix|676788946
MGSRVSYAESLATSGCDKEYNQKKKSLVASDSKTNRAIYSAKTNCDQQQFFNNLNLLENQGRVDGAGCCRGVDNLELWGPAVKWGTDFKFDKPEECCKACKVMCSGNDGPCLCDSWVFCGNKEACGSKFGECWLKKQKDVLVPDKQEGGQKVMWTSGLIFGQGEGIVGFETEHGVLHVKLHPECAPHSVYYILSLLTLRHCAGCQFHRAEKRGSYWDAEGNHINNAPYGPPYAMIQGILQPEGNMFTPIPTEHCPTISRGSVAWVGSGPEFFISLANHHEWKQSYTVFGSILPEDMEVAERIAGLPTRADVWNSVDVSVLEKPVSLTVRRMKSGQEQEEPGSVKRIRRRWRRCVGCAHVTNSAAHFSTTLQPGHPPLLTFLTYASPPPLYYPLTHRSLFLLSLISSTPPPCQPPMMDLPSPWPSILPPPSPSRQPRLGEFLLRAGPTKRPLRSSTPTKTSGPPKSAIQCRHKIEKLRKRYRGEKQRSLTRPGKFSSSWDLFPVLDAMGFAPVTPAAVEPYDPDPDHDDESNGLDGFRVRSKRSSAKFGGYSDSPRDGGDGYGVRSRSKSQMKMYGGFKPEFDSDHDSGSGFGLKRRYNGNPKVDFDADSDDEILLAPKTTRLKAASHGHGGGGGGGFPLKSFGDRSFGSHGGFSKSKNFIKPEANFSPEMDFDDEFDDEREGFNPRVQQHSRSSSRVNGYTRKDGSYPRSNNNNNTGVSNGYGSSSRFKHEQADVESDPIDEVVSSVKMLTEMFVRVENSKMEMMREMEKTRMEMELKHCQMMLESQQQIIGAFAEALSEKKSTNARRTVS