Information report for 676765190
Gene Details
Functional Annotation
- Refseq: XP_013583545.1 — PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like
- Swissprot: Q9ZSS6 — THD1_ARATH; Threonine dehydratase biosynthetic, chloroplastic
- TrEMBL: A0A0D3CLJ2 — A0A0D3CLJ2_BRAOL; Threonine dehydratase
- TrEMBL: A0A3P6FR03 — A0A3P6FR03_BRAOL; Threonine dehydratase
- STRING: Bo5g137780.1 — (Brassica oleracea)
- GO:0006520 — Biological Process — cellular amino acid metabolic process
- GO:0009097 — Biological Process — isoleucine biosynthetic process
- GO:0004794 — Molecular Function — L-threonine ammonia-lyase activity
- GO:0030170 — Molecular Function — pyridoxal phosphate binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Arabidopsis thaliana: AT3G10040.1
- Brassica napus: GSBRNA2T00110893001, GSBRNA2T00028252001, GSBRNA2T00072011001
- Brassica oleracea: XP_013583548.1, XP_013625871.1
- Brassica rapa: XP_009146876.1, XP_009135031.1
- Citrullus lanatus: Cla017742
- Cucumis melo: MELO3C009422P1
- Gossypium arboreum: Cotton_A_21637_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G1336, Gh_D09G2443
- Raphanus raphanistrum: RrC313_p13
Sequences
CDS Sequence:
- >676765190|Sisymbrium_irio|Trihelix|676765190
ATGGATTCCGTCAGGCTTCCAACGGCTCCTTCGTCCCTCCGTAGCCAAATGTTAGGCCACCCTTTACCCAATCGCCTGCACCACATTCCGCTACCTCCTTGTAATCGCCACTGCAACCTCCGATCGAAACCGGCTTTCGGAATCACCCGATCTCGCAATCACGTCTCTCCGATGGCTGTTATCACCGGGGATGAGCCGTCTTTGGCTCCGACTCTTACGGTGGATTCTCCTCCTCCGCCACGTCTCAAGGTCTCTCCGAATTCGCTGCGATACCCGGCTGGTTACCTCGGTGCGGTTCCAGAGCGTACGAGCGATCCAGAGAACGGAAGCATCGCCGAGGCTATGGAGTATTTGACGAACATTCTCTCTACCAAGGTTTACGACATCGCCATCGAGTCCCCACTGCACTTGGCCAAGAAGCTATCCGAGAGGTTAGGTGTTCGCATGTTTCTCAAAAGAGAAGACTTGCAACCTGTCTTCTCGTTTAAGCTTCGTGGAGCTTACAATATGATGGCGAAGCTCTCAGGAGAGCAATTAGCTAAAGGGGTCATCTGCTCCTCTGCTGGAAACCATGCTCAAGGAGTTGCTCTCTCTGCTAAAAAACTCGGCTGCACCGCCGTCATTGTTATGCCTCGTACTACTCCAGAAATCAAGTGGCAATCTGTGGAGGACTTGGGTGCGACTGTTGTTCTTGTTGGGGATTCGTATGATGAAGCACAAGCCTTTGCTAAGCAACGAGCTGAGGAAGAAGGTTTGACTTTTATACCTCCTTTTGATCACCCGGATATTATTGCCGGACAAGGGACTGTCGGGATGGAGATCACGCGCCAAGCTAAGGGTCCAATACATGCTATATTTGTCCCCGTCGGTGGTGGTGGTTTGATAGCTGGTATTGCTGCTTATGTGAAGAGAGTTTCTCCCGAGGTGAAGATCATTGGTGTAGAACCAGCTGATGCAAATGCAATGGCGTTGTCGCTGCATCACGGCGAGAGAGTGATACTAAACCAGGTTGGAGGTTTTGCAGATGGTGTAGCAGTAAAAGAAGTTGGGGAAGAGACTTTTCGTATATGCAAAAAGCTGTTGGATGGTGTTGTTCTTGTCACTCGTGATGCTATGTGTGCATCAATAAAGGATATGTTTGAGGAGAAACGGAACATATTAGAACCAGCAGGTGCTCTTTCGCTCGCTGGAGCTGAAGCATACTGCAAATACTATGGCCTAAAGGACGTGAACGTTGTGGTCATAACCAGTGGTGCAAACATGAACTTTGACAAGCTCAGGATTGTGACAGAACTCGCCAATGTTGGTAGGCAACAGGAGGCTGTTCTTGCTACTCTCTTGCCAGAAAAAGCTGGAAGCTTTAAGCAATTCTGTGAATTGGTTGGACCAATGGACATAACCGAGTTCAAGTATAGATGTGGCTCGGGACAGGAAGCTGTTGTACTATACAGTGTTGGAGTGCACACACCCGGAGAGCTGAAAGAACTACAGAAGAGAATGGAATCTTCTCAACTCAGAACTAGGAACCTCACAACCAGTGACTTAGTAAAAGATCACCTGCGTTACTTGATGGGTGGAAGATCAAGTGTTGAAGACGAGGTTCTATGCCGATTCACCTTCCCCGAGAGACCCGGTGCTCTAATGAACTTCTTGGACTCTTTCAGTCCACGGTGGAACATTAGCCTTTTCCATTACCGTGCACAGGGTGAGGCGGGTGCGAACGTGCTGGTCGGGATCCAAGTCTTGGAGCATGAAATGGAAGAATTTCGAAACCGAGCTCAAGATCTTGGATACGAGTACGTCTTGAGACAGCAAGATATTGTGGAAGAATATTCACCTAAGGACAGTAGACTTTTCTTTGTATTTTTGTTAAAAAAAGCTAGTGTTAGAAAAAAGGAATTAGGGATGGAACCGAATGTGATGTTTAGTGGGTTTAGTCCGAGAATGTTAAGCCTGGAGATGCCGCAGAATCCACCAAACCCGGTGCAGTTTCAGCATCCGCATCCGATGAAATACCCTTACGCCACGAAAGCCAAACAACTCTCACCGATAAGCGGCGGCGGCGGCGGGGACGACGAAGATCGCGGGTCGGGTTCCGGGTCCGGGTGTCACCCAGAGGACAGCGCGGGAACCGAGGGGAAGAGGAGAGTCTCTCAGTGGCATCGGATGAAATGGACGGACACGATGGTTCGACTGCTGATCATGGCGGTGTTCTACATGGGCGACGAGGGTGGTGGGTTAGGACTAGGAGATCAGACGGAAGGGAAGAAAAAGAGCGGGATGCTGCAGAAGAAAGGGAAGTGGAAGTCGGTGTCTAGAGCTATGGTGGAGAAAGGTTTCTCGGTGTCTCCGCAACAGTGCGAGGACAAATTCAACGACTTGAACAAAAGGTACAAGAGAGTCAACGACATTCTCGGGAGAGGAACCGCGTGTCGTGTCGTGGAGAATCAAGGGTTGCTAGACAACATGGACCATATCTCTCCCAAGTTGAAAGACGAAGTCAAGAAGCTCCTCAACTCTAAACATCTCTTCTTCAAGGAGATGTGTGCTTATCACAACAGCTGTGGACATCTCGACCAAATACCTCAACCGCAACAGCAACCGCAGAGCTGTTTTCACGCTGTTGAGTCTGGAAAAATGGCGAGGATCGCTGAGAGCGAGGAGGAGGATGAGTCGGATATGGTGGCGGATGATTCGGACTCGGAGATGGAGGATTCCGAGGACGAGGAAGAAGACACGAGGAAGAAGAGGAGGAGAGTGGAGGGAGTCTCCGCGGCGGTTAAGCGGATGAGAGAGGAGACGACGCGTGTGTTGGAGGACGCGGGGAAGAGTTCATGGGAGAAGAAGGAGTGGATGAAGAGGAAAGCGTTGGAGCTGGAAGAGAGGAAGGTCGGGTACGAGTGGGAGGCCGTGGAGATGGAGAAGCAGAGAGTCAAGTGGATAAGGTATAGGAGCAAGAAAGAGAGAGAGATGGATAAAGCTAAGCTCGACAACCAGCGACGGAGCCTTGAGACCGAGAGGATGGTTCTTATTCTTCGCCGGAGGGAGATTGAGTTGACCGAGTTACACTTGGCGGGTAAACGGGTCGACCCGAGTTCTGCAACCGGGTGA
Protein Sequence:
- >676765190|Sisymbrium_irio|Trihelix|676765190
MDSVRLPTAPSSLRSQMLGHPLPNRLHHIPLPPCNRHCNLRSKPAFGITRSRNHVSPMAVITGDEPSLAPTLTVDSPPPPRLKVSPNSLRYPAGYLGAVPERTSDPENGSIAEAMEYLTNILSTKVYDIAIESPLHLAKKLSERLGVRMFLKREDLQPVFSFKLRGAYNMMAKLSGEQLAKGVICSSAGNHAQGVALSAKKLGCTAVIVMPRTTPEIKWQSVEDLGATVVLVGDSYDEAQAFAKQRAEEEGLTFIPPFDHPDIIAGQGTVGMEITRQAKGPIHAIFVPVGGGGLIAGIAAYVKRVSPEVKIIGVEPADANAMALSLHHGERVILNQVGGFADGVAVKEVGEETFRICKKLLDGVVLVTRDAMCASIKDMFEEKRNILEPAGALSLAGAEAYCKYYGLKDVNVVVITSGANMNFDKLRIVTELANVGRQQEAVLATLLPEKAGSFKQFCELVGPMDITEFKYRCGSGQEAVVLYSVGVHTPGELKELQKRMESSQLRTRNLTTSDLVKDHLRYLMGGRSSVEDEVLCRFTFPERPGALMNFLDSFSPRWNISLFHYRAQGEAGANVLVGIQVLEHEMEEFRNRAQDLGYEYVLRQQDIVEEYSPKDSRLFFVFLLKKASVRKKELGMEPNVMFSGFSPRMLSLEMPQNPPNPVQFQHPHPMKYPYATKAKQLSPISGGGGGDDEDRGSGSGSGCHPEDSAGTEGKRRVSQWHRMKWTDTMVRLLIMAVFYMGDEGGGLGLGDQTEGKKKSGMLQKKGKWKSVSRAMVEKGFSVSPQQCEDKFNDLNKRYKRVNDILGRGTACRVVENQGLLDNMDHISPKLKDEVKKLLNSKHLFFKEMCAYHNSCGHLDQIPQPQQQPQSCFHAVESGKMARIAESEEEDESDMVADDSDSEMEDSEDEEEDTRKKRRRVEGVSAAVKRMREETTRVLEDAGKSSWEKKEWMKRKALELEERKVGYEWEAVEMEKQRVKWIRYRSKKEREMDKAKLDNQRRSLETERMVLILRRREIELTELHLAGKRVDPSSATG