Information report for 438544
Gene Details
Functional Annotation
- Refseq: XP_024524097.1 — uncharacterized protein LOC9643608
- Refseq: XP_024524098.1 — uncharacterized protein LOC9643608
- TrEMBL: D8QWN6 — D8QWN6_SELML; Uncharacterized protein
- STRING: EFJ35269 — (Selaginella moellendorffii)
- GO:0016021 — Cellular Component — integral component of membrane
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Actinidia chinensis: Achn204261
- Arabidopsis thaliana: AT3G10030.2, AT3G10030.1
- Brassica napus: GSBRNA2T00110892001
- Brassica oleracea: XP_013583546.1
- Fragaria vesca: mrna30101.1-v1.0-hybrid
- Lactuca sativa: Lsa001582
- Manihot esculenta: Manes.09G061000.4.p, Manes.09G061000.3.p, Manes.09G061000.2.p, Manes.09G061000.1.p
- Ricinus communis: 29815.m000504
Sequences
CDS Sequence:
- >438544|Selaginella_moellendorffii|Trihelix|438544
ATGGAAGAAGAGGGAACAAGAAGCAGGAACTGGCTATGGCTGTGGAGGGGAATATTCGCGTCTCCCATCGTGGAGGAGGGAGAATGGAGGGCAAGGGAGGGGTGTAGGACTTTCTCGCTGATTGATGGTCCATGGAAGATCAAGCGCTACCGTGTTGATCGGGGTGGGAGGATCCCCATGGCGGCATCCAGTGATTCGGAGAGTAAGAAGAGCAGGAAGGAGGAATTGGGGGGCGGTGGGAGCAGCAAGGAGGAGAAATCCGATACCGCGGCGGGCGGGTCAGATCAGGCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGGCGGTGGTGCCATCGCCGGCCGCCGGCGGAGGCGGCACGGCCAATGGCGCGGGCGGTACCGCCGGCGGTACGCAGCCGGCGGCAGCATCCTCCGCCGCGGCGGCTGCCAAGGAGCGCGACTACATCTGGACCGAGGACGCTGTGCACGTCCTCCTGGATCACTTCCTGGAGAAGTACATGAGCTACGAGAAGGGGATGATCCGCAACGCCGACTGGGTGGAGATCGCGCAGCGCGTCAACCAGCAGCTGGAGGGGAACAAGCCCGTCAAGACGCCCGAGCAGTGCAAGAACAAGGTGGACAATCTCAAGAAGCAGTACCGCAAGGAGCGGCGGCGCGGATCCCTTGGCCCCTCCAGCACCAATTGGGCATTCTTCTCGCGGATGCACGACATCTTCGAGAGCGATTACAAGAAAACAGGGGGTGGTGGCGGCGGTGGAGGTGGCGGCGGCGGCGGAGGAGGAGGAGACCGAGATCCTGGCGGCGCGAGCGAGGACGTACCACCGCAAAACAATTCCAATCCCGCCCCCGCCGCCGCCGCGGCTGCCAACAACATCGAGGACGCCCACCACCACCACCGCTTGCGATCCGCGGTGGTGCCGGATCACTACCTGGCGTCGCGCGAGTTCATCCGCAAGCAGCAGGAGGAGCTGATGCAGTACAACAAGCGGCCATCGCGACGGAGCGAGACGCCGCCGCCGGGGTCTGGCGGCGCGCCGATCTCCCAGCAGCACCACCCACACCACCACCACCACCACCCCATGATGCTACTGCCCGAGTCCTCACACATGGCCTTCCCGCCGCACGCATCCAATCACCACCACCGCGAGTCCGGCAGCACGCCCGCGCGGAAAAAGGCCAAGTCGGACCGGCACGAGCAGCACGGCGTCCCGCACGGCATGACGCACGGCATACCGCAGCGGCACCACGACCAGCGGCACTTGCAGCCGGCGGGGCCGCCGCAGCACCACGCGGAGGGATCGGGGCCGCCGTCGTCGGACTCGGGCGGCGGGGGTGGTGGCGGTGGAGTGGCTGCCGTGGAGGGATCCACCAAGCACGAGCGGAAGCTCCACCGGCACCAGCTCGCGGCGCTGCGGCGCGACTTCATGGAGGGATTCACGGGCTTCGCGGAGGTGATGCTCAAGATCGAGGTGGCCAAGATGGAGATGCAGCGGGATCTGGAGCGGCAGCGGGCGGAGATGGAGCTCCACCGCACGCAGATGATGTTGAGCAACCAGCTCCAGCTCGCTAAGTACCTCAAGGCCAGCCCGATACCGCACGGCATGCCGCCCGACGGCGGCGGGGCGGGCCCCTTCTGGCCAAACTTCGGCTTCACCGACGCGAATGCCAATGCCGCCGGCGGTACCGGCGGCCCCGGCGGCACGACGCCGCGGCTCCAGCTCGCCATCCCGATCTTCCCGGACTTTACCGCGCTGGATGCCGTGGGGCCTTACGAGGTACTGCATTTGCTCCCCAACGTGGAGGTGCTGTTTGTGAGCCACCAGCCTGGGCTGTACGCCGCCGGCATGGGAATGCTCACGTTGCAAGCCACCGCGTCATTCGACCAAGTGACGCGGCCGCAAATCCTCGTCGTGCCCGGCGGTATGGGCACCCGGAGGCTGCTCCAAGACCGAGTTATACTCGACTGGATCCGAAAGGTTCACGAGCATACCCTCTACACTGCTTCCGTTTGCACTGGATCGCTGCTGCTCGGTGCTGCCGGATTGCTAAAAGGCATCGAGGCAACCACGCATTGGAACTCGCATGAGCTGCTAGCGGAATTTGGAGCCAAGCCAGTATCCTCGAGGATAGTCCGCCAGGGGAAGATCATCACTGCTGCTGGAGTGTCCGCTGGGATCGACATGGCTCTTCAGCTGGCCGCTCTTCTAACGGACGAGGCCACCGCCAAGACGCTCCAACTTTTCATCGAGTATGATCCTCAGCCTCCGTTTGACAGCGGCTCGGTGGCCAAGGCCGGGCCCGAGGTGGTGAGCAGGGCCAAAGAACTGTCATCCAAGCGACTCCAAGCCGTGGCTGGTGCCAGTGCTGCTGCTGCCGCTGCCGCCGCCGCCGCCGCTGCTGCTGCTGTTGTATGTACCAAAAGACGATAG
Protein Sequence:
- >438544|Selaginella_moellendorffii|Trihelix|438544
MEEEGTRSRNWLWLWRGIFASPIVEEGEWRAREGCRTFSLIDGPWKIKRYRVDRGGRIPMAASSDSESKKSRKEELGGGGSSKEEKSDTAAGGSDQAQQQQQQQQQLAVVPSPAAGGGGTANGAGGTAGGTQPAAASSAAAAAKERDYIWTEDAVHVLLDHFLEKYMSYEKGMIRNADWVEIAQRVNQQLEGNKPVKTPEQCKNKVDNLKKQYRKERRRGSLGPSSTNWAFFSRMHDIFESDYKKTGGGGGGGGGGGGGGGGDRDPGGASEDVPPQNNSNPAPAAAAAANNIEDAHHHHRLRSAVVPDHYLASREFIRKQQEELMQYNKRPSRRSETPPPGSGGAPISQQHHPHHHHHHPMMLLPESSHMAFPPHASNHHHRESGSTPARKKAKSDRHEQHGVPHGMTHGIPQRHHDQRHLQPAGPPQHHAEGSGPPSSDSGGGGGGGGVAAVEGSTKHERKLHRHQLAALRRDFMEGFTGFAEVMLKIEVAKMEMQRDLERQRAEMELHRTQMMLSNQLQLAKYLKASPIPHGMPPDGGGAGPFWPNFGFTDANANAAGGTGGPGGTTPRLQLAIPIFPDFTALDAVGPYEVLHLLPNVEVLFVSHQPGLYAAGMGMLTLQATASFDQVTRPQILVVPGGMGTRRLLQDRVILDWIRKVHEHTLYTASVCTGSLLLGAAGLLKGIEATTHWNSHELLAEFGAKPVSSRIVRQGKIITAAGVSAGIDMALQLAALLTDEATAKTLQLFIEYDPQPPFDSGSVAKAGPEVVSRAKELSSKRLQAVAGASAAAAAAAAAAAAAAVVCTKRR*