Information report for 420183
Gene Details
Functional Annotation
- Refseq: XP_024537501.1 — uncharacterized protein LOC9638407 isoform X1
- TrEMBL: D8SB79 — D8SB79_SELML; Uncharacterized protein
- STRING: EFJ18343 — (Selaginella moellendorffii)
- GO:0005524 — Molecular Function — ATP binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >420183|Selaginella_moellendorffii|Trihelix|420183
ATGAGCAATGCCGCCAATGGCGATTCCAGCCATCCCCAGCAGCAGCAGCAATCACAGTGCCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCAAGCGCAAGGCCAACCGAGATTCCTGGCCTTTTATGCACGCGATCATGCTGCTCGAGTGCTTCAAGGACGTGTGGACCAAGAGCAACATGGGCAATCTCACCATGGCGCAGTGGACCGAGGTCTCCAACAAGGTGAACGAGTTCTGTGGCATCAGCATGAACGAGCAGCAATGCCGGACCAAGGTGGACAACCTCAAGAAGCGCTACAAGCGCGAGAGGATGAAGTACGCTCCCACTGGCCACACCTCTCCCTGGGAGTTTTACGTGGTGATGAACAAGCTCTTTGGCAACACCACCAAGCTCTCCGCCGCGGGAGCTTCGCCCATCTCTGGACAGCCCGCCGTGGGCGATGGCTGTGGAGAGGATACCGAGGGGAGTGACGAGGAGGACGTCGTGGTTCTCGACAATGGTGGCGACTTGATCTTCAACATTCCGGCCGCGAGCTTGCCTACTACGTCGCCACAGTCCGGGAACTCTTTTGGAAGAGGTGGTCACACTCTTCTTCTCGAGGGTCCTGGGGAGACTGGCCTGGACGCTTCGCCGAGTGAGAACTCAAACGTGGTGGCGGGCCAAGCGGCGGAGACGAGCAGCTACCAGGAGTTCTCGAATGCTGCTGGCTTGAGTCCACGGCTGGGCTCTGGGAAGAAGATGACGAGGGCGACCAAGAGGAAACGGGATTCGGGCGTGGGTGTCGCGGCCGGTGATGGATATGGAGATTTGCTCAAAGAGGTGGAGAGGGAGAGGAACGTCGACTGGCAGCGCAGGCTGGCTGAGCTTGCTAAAGTTGATAAGAAGCGTGCTAAGTTGCTTATGCGGTCTCAAGACGGATGCGTGGGATTCAGGAATGGACCTGTGGATGGAGCTCTTGGTGCTCAGCAGGATGGTGACGAGTTTGATGACTTGCTAGATTTCGAGAGGCGGAGGGAGGAACTTAAATGCAAGGATCTCTGCGAGGCCGAACGGAAAGTGGACTTGGCATCCAAGGCGTTGTGCGAGGCACAGCAGGAACGGGAACGGCTCGAGAGAGACGTGACTGTCGCAAGGGAAGCTTTCGAGTATAGAAAAGCGGTCGGGACAGGTTTGAAGCTGTCACTGAAGAAGTATTTCGTGGAGAAAATACAGCCCGCCGAGAGAATCAACGCTTCTTTGACGAAGTTTCCATATTACCTGAGTGATGTCACTCGGGATTTCCTAGTTGAGGCGCTGGGATCGTGCCTCGATCAATCTAGACGAGCGAGTCACTTGTCCGGCCTTTGTGCCTCCAGCAATACGATCTTGCTGAATGGTCCACAAAATTCGGAAATGTACCAGGAAATGCTGGTGAAAGCAATTGCTCATGATCAAGGCGTAGCGTTACTAATGCTCGATAGTACAGATCTTGCTCCTCAAGATCACGGTGATGGTTATACTGATGCAGTTGAAGCAGATGATGATATGTCGAAGGTGACGGGCTTCAAATATGGGTTCAGGAAAGGTGATCGTGTCGTAAGCAAAAGGGACGAAAGGCAAAGAGGTCGAGTCATTGCCGTCTCTGAAAGTGTTTCTGGAAAGATTGGGATCCTCTTTGATGCGACGGAGGACGCACTCAAGTTAACAACAAGGTTCGAGGACATTCGAAGAAGTCCTCCCATTGAATGGCATTATGCATGGCAAGCCACTATCAGCGCTTTGTGCGAGATAAGTAGAAGCGCTAAGCCTTTGATTGTGTACTTCCCGGAACTTGAGCAATGGTTTGAAAGAGCAGTCCCTGTAGCTTGGAAGCAGGAGATCATTGACAATTTACAAAGGCAATTGGACAAAGTGATTGGAAACGTCGCTCTTATTGCCACCTTCACTTCCGATGCAGATGAGCCTCTTTCTGTGGTTAAAAGGAAGAGCTTGAAGAGTATACATAACTTATTCGCCAATGTGGTCGATATTTTTCCTCCAAAGGATGATCTAGACTTCTGGAGATGGAAAGCGCTTCTTTTGCAAGACGGTGAGCGTGTTACTGCGAATAAGAATATCCAACTATTACAGAAGGTTCAGGTTCTGACGTCCCACAACCTGGTGTGTTTGGAATTTATGGAGTTTCAAATATGTGACTTCCTTCTCACATACTCGGAATATTCACGTAGACAAATCGACTGCCAAAACTTCTCTTTCGGCAGGCAGGTTTGCAGCTTGGATAGAGCGCTTCTCAAGCTGAGACGGCTCAAGCATGCGCAAGGTCCTAAGCTAGTAGCAAAAGACGAGTTCGAAGAAGCTGTGTTGTCTACAATATTGGCGCCAAACGGCACACCGAAATTTGATGACGTTGGTGCACTTGAGGATGTGAAGAAAATTCTTGGAGAGCATGTTGTGGTGCCCCTCCTGAGACCAGAACATTTTGCCAAGGGAGCGTTGGCATGTCCTTGCAAAGGTGTACTTTTATATGGACCGCCTGGTACTGGGAAGACTTACTTGACAAAGGCCGTTGCAGCCCAGTCTTCCGCGAACTTATTTTGGCTTAGAGGCAATTCTATTGAGTACAAGATCGACAGTATTTTCGCCATACAAGCTGGAGAAGCAATGACGAGGTTCAAGTTCGAGTTTATCTATGGATGGGATCGGCTCATGTCAGGAATAGCAGAGCCAGTTGTGGTGATGGCAGCTACATGCCGACCCTTCCATTTGGACGAATCAGTCATTCAAAAGTTCCCGAAAAGGTCTACTTTCAATAATTTATCAAGCCGTGAAAAAATCCTTGTTGTGCTGCTTGCCAAGGAGGAGATTGAGAATGGCTTCGACTTTAAAGGAGTAGCAGAATTAACTGATGGCTATAGCGCAAATGACTTGAAGAACTTAACTGTGGCTGCAGCGTATCGGCCTGTTCGAGAAATGCTGGAGTTAGAGAAAGCCAAAAGAAATGCTTTTGGACAGCCACTGCCTCAAGAACTAAGGCCACTTACAACACAGGACTTCGTGAGTACTCTGGAGGAGGTTAATTTATCTTATAACGCTGGATACCTCGACCAGCTTCGAGAGTGGGATGGACAGTTTGGCAACCGATGGTAG
Protein Sequence:
- >420183|Selaginella_moellendorffii|Trihelix|420183
MSNAANGDSSHPQQQQQSQCQQQQQQQQQQQQQRKRKANRDSWPFMHAIMLLECFKDVWTKSNMGNLTMAQWTEVSNKVNEFCGISMNEQQCRTKVDNLKKRYKRERMKYAPTGHTSPWEFYVVMNKLFGNTTKLSAAGASPISGQPAVGDGCGEDTEGSDEEDVVVLDNGGDLIFNIPAASLPTTSPQSGNSFGRGGHTLLLEGPGETGLDASPSENSNVVAGQAAETSSYQEFSNAAGLSPRLGSGKKMTRATKRKRDSGVGVAAGDGYGDLLKEVERERNVDWQRRLAELAKVDKKRAKLLMRSQDGCVGFRNGPVDGALGAQQDGDEFDDLLDFERRREELKCKDLCEAERKVDLASKALCEAQQERERLERDVTVAREAFEYRKAVGTGLKLSLKKYFVEKIQPAERINASLTKFPYYLSDVTRDFLVEALGSCLDQSRRASHLSGLCASSNTILLNGPQNSEMYQEMLVKAIAHDQGVALLMLDSTDLAPQDHGDGYTDAVEADDDMSKVTGFKYGFRKGDRVVSKRDERQRGRVIAVSESVSGKIGILFDATEDALKLTTRFEDIRRSPPIEWHYAWQATISALCEISRSAKPLIVYFPELEQWFERAVPVAWKQEIIDNLQRQLDKVIGNVALIATFTSDADEPLSVVKRKSLKSIHNLFANVVDIFPPKDDLDFWRWKALLLQDGERVTANKNIQLLQKVQVLTSHNLVCLEFMEFQICDFLLTYSEYSRRQIDCQNFSFGRQVCSLDRALLKLRRLKHAQGPKLVAKDEFEEAVLSTILAPNGTPKFDDVGALEDVKKILGEHVVVPLLRPEHFAKGALACPCKGVLLYGPPGTGKTYLTKAVAAQSSANLFWLRGNSIEYKIDSIFAIQAGEAMTRFKFEFIYGWDRLMSGIAEPVVVMAATCRPFHLDESVIQKFPKRSTFNNLSSREKILVVLLAKEEIENGFDFKGVAELTDGYSANDLKNLTVAAAYRPVREMLELEKAKRNAFGQPLPQELRPLTTQDFVSTLEEVNLSYNAGYLDQLREWDGQFGNRW*