Gene Details:

  • Gene ID: GSBRNA2T00046376001
  • Gene Name: GSBRNA2T00046376001
  • Gene Family: S1Fa-like Family
  • Description: S1Fa-like Family protein
  • Species: Brassica napus
  • Source: S1Fa-like family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_013613776.1  — PREDICTED: L-type lectin-domain containing receptor kinase VIII.1
  • Refseq:  XP_013613778.1  — PREDICTED: L-type lectin-domain containing receptor kinase VIII.1
  • Refseq:  XP_013666974.1  — L-type lectin-domain containing receptor kinase VIII.1-like
  • Refseq:  XP_022556687.1  — L-type lectin-domain containing receptor kinase VIII.1-like
  • Swissprot:  Q9LFH9  — LRK81_ARATH; L-type lectin-domain containing receptor kinase VIII.1
  • TrEMBL:  A0A078H068  — A0A078H068_BRANA; BnaC04g27370D protein
  • STRING:  Bo00703s150.1  — (Brassica oleracea)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0006468  — Biological Process — protein phosphorylation
  • GO:0005634  — Cellular Component — nucleus
  • GO:0016021  — Cellular Component — integral component of membrane
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0004674  — Molecular Function — protein serine/threonine kinase activity
  • GO:0005524  — Molecular Function — ATP binding
  • GO:0030246  — Molecular Function — carbohydrate binding

Family Introduction:

  • A cDNA encoding a specific binding activity for the tissue-specific negative cis-element S1F binding site of spinach rps1 was isolated from a spinach cDNA expression library. This cDNA of 0.7 kb encodes an unusual small peptide of only 70 amino acids, with a basic domain which contains a nuclear localization signal and a putative DNA binding helix. This protein, named S1Fa, is highly conserved between dicotyledonous and monocotyledonous plants and may represent a novel class of DNA binding proteins. The corresponding mRNA is accumulated more in roots and in etiolated seedlings than in green leaves. This expression pattern is correlated with the tissue-specific function of the S1F binding site which represses the rps1 promoter preferentially in roots and in etiolated plants.

Literature:

Sequences:

CDS Sequence:
  • >GSBRNA2T00046376001|Brassica_napus|S1Fa-like|GSBRNA2T00046376001
    ATGTCGTTTCTCCCATCTCTCTTCTCAGTTTCGATCTTGCTCTGCTTCTTCTGCTCTTTAAATGAAGCTACGACTGACAACGGAATCGTCAGCCTCACACGTGACCTCTCCGTTCCCAACTCCGGCGCCGGGAAAGTCTTGTACGCTAACCCAATCAGATTCCGACAACCCGGAACTCATTCCCCGGCGAGTTTCTCCACCTTTTTCTCCTTCTCCATCACAAACATCAACCCTTCTTCAATCGGCGGCGGTCTCGCCTTCGTCATCACCCCAGACGGAAACACAGTCGGCGCCGCCGGAGGATCTCTAGGCCTCGCCGGCCCCTCCGTGTCCAAATTCGTCGCTGTGGAGTATGACACGTTGATGGATGTTGACTTTAAGGATATTAACAGCAACCACGTCGGATTCGACGTGAACGGCGTCGTTTCGTCTGTTTCCGGCGATCTCGGCACTGTAGACATCGATCTAAAGAGCGGAAACACCGTGAATTCGTGGATTGAGTACGACGGGTTGAGTCGGGTCTTCAACGTATCGGTCTCTTACTCGAATCTGAAACCAAAATCTCCGGTTTTGTCTTTCCCTCTCGATCTTGACCGTTACGTGAACGACTTCATGTTCGTTGGTTTCTCCGGGTCTACTCAGGGAAGCACAGAAAGCCACAGCATCGAGTGGTGGAGCTTCAGGTCCTCCTTCGGGTCGGGTCCCGGGTCCGGATCCGGACCCTCTCCTCCTACTGCTAATTTACCGTCTTCCTCCGCCGTTCCGATCAGCTCTCAATCGAAAACTCCGCCGACTTGCCGCAACCACCTGTGTAAAGAGAATCGTGGAGCAATCGCCGGAGTGGTAACCGCCGGTGCTTTCTTCTTAGCACTATTCGCCGGCGGTTTACATGACTCCTTCGCGTCGGAGATCATCAAAGCCCCTAAAGAGTTCAGCTACAAGGAGCTCAAAGCCGCCACCAAGAGCTTCAACGAGAGTCGAAGCATCGGACACGGCGCCTTCGGGGTTGTCTACAGAGGCGTTCTACCCGAGACCGGAGACGTCGTCGCTGTTAAACGGTGTAGCCACAGCTCGCAAGACAAGAAGAACGAGTTTTTGTCGGAACTATCCATCATCGGAAGTCTCAGACATAGAAACCTTGTCCGGTTACAAGGATGGTGCCACGAGAGAGGTGAGATTCTGTTGGTGTATGATCTTATGCCTAACGGTTCGCTTGATAAGGCTTTGTTTGAGTCACGGTTTCCGTTGCCGTGGGATCACCGGAAGAAGATCTTGCTTGGGGTTGCATCAGCTCTTGCTTATCTACACAGAGAGTGTGAGAATCAGGTGATACACAGAGACGTGAAGAGCAGTAACATAATGCTAGACGAGAACTTCAACGCCAAGCTCGGAGATTTCGGGTTAGCTAGACAAATCGAGCACGATAAATCGCCGGAAGCGACGGTTGCCGCCGGGACGATGGGGTACTTAGCGCCGGAGTATCTTCTGACGGGTCGCGCCACGGAGAAGACGGACGTTTTCAGCTACGGAGCAGTGGTTCTTGAAGTGGTTACGGGAAGGAGACCGATCGAGAAGGACTTGAATGCGCAGAGGCAAAACGTTGGGGCGAATCCGAATTTGGTAGAATGGGTGTGGGGTTTGTATAAAGAAGGGAAGGTTACGGCTGCGGCGGATTCAAGGCTTGAAGGTAAGTTTGATGAAGGAGAGATGTGGCGGGTTATGGTGGTGGGCTTAGCTTGTTCTCATCCGGACCCAGAGGCTCGGCCCACGATGAGGTCAGTGGTGCAAATGCTGATTGGTGAGGCTGATGTACCGGTTGTTCCTAAGTCGAGACCGACTATGAGTTTTAGCACTTCGCATTTGTTGTTGAGTTTGCAAGATACTTTATCTGATTGCAATACTTTGGCGTTGAATTCTAGTAGGTCTTCCTCATGGTCTGTGCCTGAACATAATGTTATGATTAGAGGTGACGATGACCATATGAGATTTCGGATCGTATTCATGGACAGAGAAGATTTTGCCAGAAAGGCGGCTGCAGAAGCCAGAGGATTGAACCCGGGACTAATCGTGCTGCTTGTTATCGGAGGTCCGCTTGTTGTGTTCCTTGTTGCCAACATCGTGCTCTACGTGCATGCACAGAAGAACCTACCTCCAAAGAAGAAGAAGCCAGTTTCTAAAAAGAAGCTCAAGCGGGAGAAGCTGAAGCAAGGAGTCTCCGTGCCGGGAGAATAA
Protein Sequence:
  • >GSBRNA2T00046376001|Brassica_napus|S1Fa-like|GSBRNA2T00046376001
    MSFLPSLFSVSILLCFFCSLNEATTDNGIVSLTRDLSVPNSGAGKVLYANPIRFRQPGTHSPASFSTFFSFSITNINPSSIGGGLAFVITPDGNTVGAAGGSLGLAGPSVSKFVAVEYDTLMDVDFKDINSNHVGFDVNGVVSSVSGDLGTVDIDLKSGNTVNSWIEYDGLSRVFNVSVSYSNLKPKSPVLSFPLDLDRYVNDFMFVGFSGSTQGSTESHSIEWWSFRSSFGSGPGSGSGPSPPTANLPSSSAVPISSQSKTPPTCRNHLCKENRGAIAGVVTAGAFFLALFAGGLHDSFASEIIKAPKEFSYKELKAATKSFNESRSIGHGAFGVVYRGVLPETGDVVAVKRCSHSSQDKKNEFLSELSIIGSLRHRNLVRLQGWCHERGEILLVYDLMPNGSLDKALFESRFPLPWDHRKKILLGVASALAYLHRECENQVIHRDVKSSNIMLDENFNAKLGDFGLARQIEHDKSPEATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVVTGRRPIEKDLNAQRQNVGANPNLVEWVWGLYKEGKVTAAADSRLEGKFDEGEMWRVMVVGLACSHPDPEARPTMRSVVQMLIGEADVPVVPKSRPTMSFSTSHLLLSLQDTLSDCNTLALNSSRSSSWSVPEHNVMIRGDDDHMRFRIVFMDREDFARKAAAEARGLNPGLIVLLVIGGPLVVFLVANIVLYVHAQKNLPPKKKKPVSKKKLKREKLKQGVSVPGE*