Gene Details:

• Gene ID: GRMZM2G147424_P01
• Gene Name: LOC100281782, ZEAMMB73_542535
• Gene Family: S1Fa-like Family
• Description: S1Fa-like Family protein
• Species: Zea mays
• Source: S1Fa-like family gene from PlantTFDB

Protein Features:

• Pfam:  PF03094
• Pfam:  PF04689
• InterPro:  IPR004326    IPR006779

Annotation Proteins:

• Refseq:  NP_001148174.1  — DNA-binding protein S1FA2
• Refseq:  XP_023156904.1  — DNA-binding protein S1FA2 isoform X1
• Swissprot:  Q7XLX6  — S1FA2_ORYSJ; DNA-binding protein S1FA2
• TrEMBL:  A0A3L6GA23  — A0A3L6GA23_MAIZE; DNA-binding protein S1FA2
• TrEMBL:  B6SLS1  — B6SLS1_MAIZE; DNA-binding protein S1FA2
• STRING:  OGLUM04G11330.1  — (Oryza glumipatula)
• STRING:  ORUFI04G12840.1  — (Oryza rufipogon)
• STRING:  ONIVA04G09610.1  — (Oryza nivara)
• STRING:  OBART04G11650.1  — (Oryza barthii)

Gene Ontology:

• GO:0006355  — Biological Process — regulation of transcription, DNA-templated
• GO:0005634  — Cellular Component — nucleus
• GO:0003677  — Molecular Function — DNA binding

Family Introduction:

• A cDNA encoding a specific binding activity for the tissue-specific negative cis-element S1F binding site of spinach rps1 was isolated from a spinach cDNA expression library. This cDNA of 0.7 kb encodes an unusual small peptide of only 70 amino acids, with a basic domain which contains a nuclear localization signal and a putative DNA binding helix. This protein, named S1Fa, is highly conserved between dicotyledonous and monocotyledonous plants and may represent a novel class of DNA binding proteins. The corresponding mRNA is accumulated more in roots and in etiolated seedlings than in green leaves. This expression pattern is correlated with the tissue-specific function of the S1F binding site which represses the rps1 promoter preferentially in roots and in etiolated plants.

Literature:

• Molecular cloning of a small DNA binding protein with specificity for a tissue-specific negative element within the rps1 promoter.   DOI:  10.1093/nar/23.7.1165 ;  PMID:  7739894

Sequences: