Information report for DCAR_031190
Gene Details
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Functional Annotation
- Refseq: XP_017224018.1 — PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830
- TrEMBL: A0A175YKE9 — A0A175YKE9_DAUCS; Uncharacterized protein
- STRING: Solyc05g015150.2.1 — (Solanum lycopersicum)
- GO:0006468 — Biological Process — protein phosphorylation
- GO:0005886 — Cellular Component — plasma membrane
- GO:0004672 — Molecular Function — protein kinase activity
- GO:0005515 — Molecular Function — protein binding
- GO:0005524 — Molecular Function — ATP binding
Family Introduction
- A cDNA encoding a specific binding activity for the tissue-specific negative cis-element S1F binding site of spinach rps1 was isolated from a spinach cDNA expression library. This cDNA of 0.7 kb encodes an unusual small peptide of only 70 amino acids, with a basic domain which contains a nuclear localization signal and a putative DNA binding helix. This protein, named S1Fa, is highly conserved between dicotyledonous and monocotyledonous plants and may represent a novel class of DNA binding proteins. The corresponding mRNA is accumulated more in roots and in etiolated seedlings than in green leaves. This expression pattern is correlated with the tissue-specific function of the S1F binding site which represses the rps1 promoter preferentially in roots and in etiolated plants.
Literature and News
Sequences
CDS Sequence:
- >DCAR_031190|Daucus_carota|S1Fa-like|DCAR_031190
ATGATCAACCTTAACAACTCTGTTTTACTATCTTTATCTCTCTTGATTATCTACATTAACGTTTGTTTTGTGTCAACACTCTCGCTCTCCTCCGACGGACTCTCTCTCCTCTCTCTAAAATCCGCGGTGGAGTCCGGCGACAGTGTATTTTCCGACTGGAACGAGAACGACGCCGACCCATGTCACTGGTCCGGCATTTCGTGCTCCAACATCACCAACAGCTCCGGCCCGCGCGTCGTCGCTATAGCCATCTCCGGCAAGAATCTCCGCGGCTACATTCCGTCGGAACTCGGCGCTCTTACTTATCTCCGGCGTCTCAATCTTCACGGTAACAGTTTTCACGGCTCCATTCCGGCTCAGCTCTTTAATGCTTCTTCACTGCACAGTATATTTTTGTATAGTAACAATTTATCCGGCTCTTTGCCGCCTGCGTTGTGTAATCTGCCGAGGTTGCAGAACCTTGATCTTTCGAATAATTCGCTTTCGAGCTCGATTCCGCGAGATTTTCGGAATTGTAGGCAGCTGCAGAGGTTGATTCTCGCCGAGAATAAGTTATATGGGGAGATCCCGGTGGGGGTGTTTCCGGAGCTAGCTAATTTAGTTCAGCTTGATTTGTCTTCGAATTTGTTGAATGGATCGATTCCTGAAGATATAGGGGAGTTGAAGTCTTTATCAGGGACATTGAATATGTCTTTTAATGAATTTTCGGGTAAGTTGCCTAAGTCCATGGGTGATTTGCCGTTGACTGTGAGTTTTGACCTTAGGAGTAATAAGCTGAGTGGTGAGATTCCTCAGACAGGGTCTTTTGCTAATCAGGGTCCGACGGCGTTCTTGAATAATCCTCTTTTGTGTGGATTTCCTTTGCAGAAATCTTGTAGGGGAGACAATGGAAGTGATTCTTCTTCCGGGGTTCAGAATGTGTCTCCCGCGAGTGATAAGAAGGATTCGGGGAAGGGACTTAAGCCTGGTCTGATCGTTTTGATTTCTGTTGCAGATGCTGCTGGGGTTGCGTTTATTGGATTGGTGGTTGTTTATGTGTACTGGAAAAAGAAGGAATCGAATGGTTGTAGCTGCACTGGAAAGCGGAAGTTTGGTTCTAGTGAGAAAGGTCATTTGTGTGTGTTCCCTTGTATTGGTGGAAATTCGGGTAATGATTCGGATGTACATTCGGAGAAAGGTGGGGTCGGTAGTGGAAGTGGTGCTGGTGGTGGTGAAGGGGACCTTGTGGCGATTGATAAAGGGTTTAATTTTGAGTTGGATGAATTGTTGAGAGCATCTGCCTATGTTTTGGGGAAGAGTGGGCTGGGAATTGTGTATAAGGTAGTGCTTGGTAATGGGGTGCCTGTGGCAGTGAGGAGACTTGGAGAAGGCGGTGAACAGAGGTATAAGGAATTTGTTTCGGAGATTCAGGCGATAGGGAGGGTTAAGCACCCTAATGTTGTTAAGTTGAGAGCTTACTATTGGGCTCCTGATGAGAAGCTTCTTATCAGTGATTTCATCTCCAATGGCAATCTCATATCTGCTCTTCGTGGACGCACTGGTCATCAACCATCGAGCCTTTCTTGGTCAGTCAGATTAGGAATAGCAAAAGGAACCGCCAGGGGGTTGGCCTACCTACATGAATGTAGCCCAAGAAAATTCGTACATGGAGATATCAAACCTTCCAACATCCTCCTTGACAATGAATTGCAGCCGTTCATTTCCGATTTTGGCCTCAATAGACTAATTAACATCACAGGCAGCAATCCCTCTTCCTCTGGGGGATTTATAGGCGGAGCCCTTCCTTACTTGAACTCTGTCCAACCAGAGAGAGCCAATAACTACCGAGCACCAGAGGCTCGGATCACTGGTAGCAGACCTACGCAAAAGTGGGATGTGTATTCATTTGGAGTTGTCTTGCTTGAATTGCTAACGGGAAAATCTCCCGATATATCCCCAGCCGCATCAACTTCTACTGAGTTTATAGATCTAGTGAGATGGGTTAGAAAGGGTTTTGAAGAAGAAACCCCATTATCGGATATGGTAGATCCATTGTTGCTTCAGGAAGTTCGTGCCAAAAAGGAAGTGCTGGCAGTGTTTCATATAGCTCTTGCATGCACCGAGGTAGAGCCTGAAAGTCGACCAAGGATGAAGACGGTCTCTGAAAACCTGGAGAGAATTGGATCATAA
Protein Sequence:
- >DCAR_031190|Daucus_carota|S1Fa-like|DCAR_031190
MINLNNSVLLSLSLLIIYINVCFVSTLSLSSDGLSLLSLKSAVESGDSVFSDWNENDADPCHWSGISCSNITNSSGPRVVAIAISGKNLRGYIPSELGALTYLRRLNLHGNSFHGSIPAQLFNASSLHSIFLYSNNLSGSLPPALCNLPRLQNLDLSNNSLSSSIPRDFRNCRQLQRLILAENKLYGEIPVGVFPELANLVQLDLSSNLLNGSIPEDIGELKSLSGTLNMSFNEFSGKLPKSMGDLPLTVSFDLRSNKLSGEIPQTGSFANQGPTAFLNNPLLCGFPLQKSCRGDNGSDSSSGVQNVSPASDKKDSGKGLKPGLIVLISVADAAGVAFIGLVVVYVYWKKKESNGCSCTGKRKFGSSEKGHLCVFPCIGGNSGNDSDVHSEKGGVGSGSGAGGGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFVSEIQAIGRVKHPNVVKLRAYYWAPDEKLLISDFISNGNLISALRGRTGHQPSSLSWSVRLGIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNELQPFISDFGLNRLINITGSNPSSSGGFIGGALPYLNSVQPERANNYRAPEARITGSRPTQKWDVYSFGVVLLELLTGKSPDISPAASTSTEFIDLVRWVRKGFEEETPLSDMVDPLLLQEVRAKKEVLAVFHIALACTEVEPESRPRMKTVSENLERIGS*