Information report for Cla017612
Gene Details
Functional Annotation
- Refseq: XP_022151376.1 — nuclear transcription factor Y subunit A-10
- Refseq: XP_022151377.1 — nuclear transcription factor Y subunit A-10
- TrEMBL: A0A0A0LE75 — A0A0A0LE75_CUCSA; Uncharacterized protein
- STRING: XP_004136716.1 — (Cucumis sativus)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
Family Introduction
- NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
- NF-YA proteins are characterized by the presence of Gln(Q)- and Ser/Thr(S/T)-rich NH2 termini, a subunit interaction domain (NF-YB/NF-YC interaction), and a DNA-binding domain (Olesen and Guarente, 1990; Maity and de Crombrugghe, 1992; Xing et al., 1993, 1994). The protein interaction and DNA binding domains are well conserved between plant and other eukaryote lineages.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_43968
- Cucumis melo: MELO3C009551P1
- Cucumis sativus: Cucsa.241980.1
- Glycine max: Glyma.10G082800.5.p, Glyma.10G082800.4.p, Glyma.10G082800.3.p, Glyma.10G082800.2.p, Glyma.10G082800.1.p, GmNFYA-C, Glyma.02G195000.5.p, Glyma.02G195000.4.p, Glyma.02G195000.3.p, Glyma.02G195000.2.p, Glyma.02G195000.10.p, Glyma.02G195000.9.p, Glyma.02G195000.8.p, Glyma.02G195000.7.p, Glyma.02G195000.6.p, Glyma.02G195000.1.p
- Gossypium hirsutum: Gh_A01G1710
- Populus trichocarpa: Potri.016G068200.2, Potri.016G068200.1
- Vitis vinifera: GSVIVT01022601001
- Ziziphus jujuba: XP_015900396.1, XP_015900395.1
Sequences
CDS Sequence:
- >Cla017612|Citrullus_lanatus|NF-YA|Cla017612
ATGGCACCACAAACTGGCTATTTGAAAGAACATGAAGGAATTGTTCCTAATTCCCTTGGCCAGTTATCATCTTCTCCTGCCAGTTTATGGAGTGCCTTTGGGCAAGGTTCTCAATCAATCTTTGGGGATTTTGGTCTAGTCAAGGCTTCATCTGAACAACTTGGCAGTAATGGGAAGGAGTTCAATGGCACCAAACAAGCTGCTCATGGCTTGGAGAAAGTGAATATAGCTCCATTTTCCATCTATCCTGGTGACTGTAAGATTTCGATGGATGCACAAAAACCTTCACCAGTTTTTTCCCTGCAATCACCCTTGTCAGAATATCAAAATCGTTTTGAGCTTGGATTTGGCCAACCTTTGATATGTGCAAATTATCCGTACATGGAACAGCATTATGGCATCCTGTCAGCTTATGGACCTCAAATACCAGGCCGGATTATGCTGCCAATGAGCTTAACATCAGATGATGGACCTATTTATGTGAATGCAAAGCAGTATCATGGAATCATTAGGCGCAGGCAGATCCGTGCTAAGGCAATGATGGAGAATAAACTTGCAAGAACTCGTAAGCCATATATGCACGAATCGCGTCATCTTCATGCAATGCGCCGTCCACGGGGATCTGGTGGCCGTTTCTTGAACACAAAGAATCTGAAAAATGGGAAACTCTCAATGGAACCAAAGAAAATTGATGATGTGAACCTTTCTGATTCAACTGGCTCCCAATGTTCTGTGGTTCTGCAATCAGAAAGTGGAACTTTGAACTCCCGAAATGATGCAAAGGGGAGGGGCTTTAGTCTCTCGAGTTCGGAGAGATCATCGATGGAGGAGGGCATGGCATGGTTCTGCCCAAATGGGTTGCAGCAGCTGACAACTGCTGCGACCTTTGTGTTTGATGGCGAAGGCAATGGGTTCTTGGTGCAAGTCATTGCACCAAAACCCTGTCTTTGTTGCGACCAAATCCAGCTTGCTACAATGTCGTCGACGGCAATTGTCTCAGGCTTCGCGATGAGGATAGTCCCCGCGTTTGGTTGCAATGGCAAGTCATTTTTGGCTCTAACTAATGTAGGTGTAGGATGTCTCTTATCTCTTTGTTTTGCTTCTCAGTATGGGAAGTGGCTAAGAGAAACAAAGGAATCATCCAATCAGATATCAAGTATGAAGTAA
Protein Sequence:
- >Cla017612|Citrullus_lanatus|NF-YA|Cla017612
MAPQTGYLKEHEGIVPNSLGQLSSSPASLWSAFGQGSQSIFGDFGLVKASSEQLGSNGKEFNGTKQAAHGLEKVNIAPFSIYPGDCKISMDAQKPSPVFSLQSPLSEYQNRFELGFGQPLICANYPYMEQHYGILSAYGPQIPGRIMLPMSLTSDDGPIYVNAKQYHGIIRRRQIRAKAMMENKLARTRKPYMHESRHLHAMRRPRGSGGRFLNTKNLKNGKLSMEPKKIDDVNLSDSTGSQCSVVLQSESGTLNSRNDAKGRGFSLSSSERSSMEEGMAWFCPNGLQQLTTAATFVFDGEGNGFLVQVIAPKPCLCCDQIQLATMSSTAIVSGFAMRIVPAFGCNGKSFLALTNVGVGCLLSLCFASQYGKWLRETKESSNQISSMK