Information report for 29323
Gene Details
Functional Annotation
- Refseq: XP_001422464.1 — predicted protein
- TrEMBL: A4SAN5 — A4SAN5_OSTLU; Uncharacterized protein
- STRING: ABP00781 — (Ostreococcus ’lucimarinus')
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
Family Introduction
- NF-Y transcription factors are likely found in all eukaryotes and have roles in the regulation of diverse genes (McNabb et al., 1995; Edwards et al., 1998; Maity and de Crombrugghe, 1998; Mantovani, 1999). In mammals, where their biochemistry is well described, the NF-Y transcription factor complex is composed of three unique subunits: NF-YA, NF-YB, and NF-YC. Assembly of the NF-Y heterotrimer in mammals follows a strict, stepwise pattern (Sinha et al., 1995, 1996). Initially, a heterodimer is formed in the cytoplasm between the subunits NF-YB and NF-YC. This dimer then translocates to the nucleus, where the third subunit, NF-YA, is recruited to generate the mature, heterotrimeric NF-Y transcription factor (Frontini et al., 2004; Kahle et al., 2005). Mature NF-Y binds promoters with the core pentamer nucleotide sequence CCAAT, and this can result in either positive or negative transcriptional regulation(Peng and Jahroudi, 2002, 2003; Ceribelli et al., 2008).
- NF-YA proteins are characterized by the presence of Gln(Q)- and Ser/Thr(S/T)-rich NH2 termini, a subunit interaction domain (NF-YB/NF-YC interaction), and a DNA-binding domain (Olesen and Guarente, 1990; Maity and de Crombrugghe, 1992; Xing et al., 1993, 1994). The protein interaction and DNA binding domains are well conserved between plant and other eukaryote lineages.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn168231, Achn155941
- Capsicum annuum: CA00g74270
- Cicer arietinum: XP_012574919.1, XP_012574921.1, XP_012574920.1, XP_004513467.1, XP_004513464.1, XP_004513462.1
- Citrus sinensis: orange1.1g019806m, orange1.1g019782m
- Fragaria vesca: mrna12709.1-v1.0-hybrid
- Glycine max: Glyma.15G173300.4.p, Glyma.09G068400.7.p
- Lotus japonicus: Lj0g3v0252369.1
- Populus trichocarpa: Potri.006G145100.6
- Ziziphus jujuba: XP_015889304.1
Sequences
CDS Sequence:
- >29323|Ostreococcus_lucimarinus|NF-YA|29323
ATGAGAGGATTCGAGAGGAAAGGTGTCCGGCAGTACAACCGGTCGGAGGTGCCACGGATGCGGTGGACGGAGGAGCTGCACAGGCAGTTCGTCGAGGCCGTCGAGTGCCTTGGTGGCCAGGACGAAGCCACTCCAAAGCGAATTCTCCAGTTGATGGGCGTGAAGGGAGTTAGCATATCACATATCAAGAGCCATCTTCAGATGTATAGAAGCTCCAGCAACAGCAGTACCCATCAGGCCAGCCACCAGAAGTTGACATCAACCACTGCGAGCAACAGCAAGCGCGTGTTCTTGAACCGTGAAGGCCGCTGCTTTTACGCACCTCATGATGGAAACGCAGCAGCAGATTCAGACAAGAACATTTACACCATGCTCCGTAATTGCAGTCACGCATCACCATGCCAATTACCATCGCTAAAAGAAGTATTCAGTATGTGGGAACAAAGTAGGGGACGCGTTCCTCGGCACTCCAACGTGCTTACAACAGAAAAGGCGATTAGGCCAAGTCACACTTTCAACAAGAAGCCTGAGAAGCAAAAAAGCTGTGACCTGACGCTATCGATCGGCCCGTGGGGGGACGCGAGCAGCGACGCCGACGGCTCGAGCACGATCAGTGAGGAGCTTGCCTCGCAGCCAAGGGGCGAGTCATTCGGCTCTTCGGCGACAGGCGATTGCTTTGCCGCTGTGAAACAGGAGAGCATACCGGCTCTGAACCTGGACCTGACCATGTCGTCTTCATGGCTTGCCTGA ATGGTCTCCGCCGGAACGCCGCCGGCGCAGCCGCCCCAGCACGACGCCGCCGCGTCGGGGGAGGACGCCAGCAAGAAGGTGCGGAAGCCGTACACCATCACCAAGTCGCGCGAGAGTTGGACGGAGCAGGAGCACGACAAGTTCCTCGAGGCCCTGCAGCTCTTTGATCGTGACTGGAAAAAGATTGAAGCTTTTGTTGGCTCAAAGACTGTCATCCAGATAAGGAGCCATGCACAGAAGTACTTTTTGAAGGTTCAAAAGAATGGTACTAGTGAACATGTCCCACCTCCGCGACCAAAGCGCAAAGCTGCTCATCCATATCCTCAGAAGGCCTCCAAAATTGAACCAAACTATGCACTCAAGACAGAATCGTCATCCATCCATAGGAACTCAGGCATGAATGCAACTGTTTCCTCATGGGCTCACAATTCTGTCCGACCAATTGTTGGGTCATCAATGGTGAAAGTAATGCCGGATTTCACACAAGTATACAGCTTCTTGGGCAGTATTTTTGATCCAAGCACAAGTGGTCATCTGCAGAAACTTAAAGAGATGAATCCAATTGATGTTGAAACGGCATTGTTGTTGATGAGGAACCTCTCCATCAATTTGACAAGTCCTGATTTTGAAGATCAAAGGAAGTTGTTGTCTTTATATAGCACTTCTGATGGACTTGAGCTAGGGAGCTCCAGGAGTTCAGCTCTTGCAATGAATGCACCTTTCATGTAA ATGTACTTCGAGACGGAGGACGACGCGTACGAGTTCTACAAGGCCTACGCCGCCCGCCTCGGCTTCGTCGTCCGCAAGTCCAACAAGTCCAAGAACTCGCGGCACACCGTCACTCGCCGCCTCTTCGTGTGCTCCAAGCAGGGATTCCGCCAGGAACCCAAGAAGCCCCAGGACGAGGCCGGCGCCGGCGCCGGTACCTCCTCCTCACCGGTGCCGCCTCGATGCCCGGACTCCCGTACCGGTTGCCTGGCATCACTCACCATCAAGCTCGTCCCTTCGGCCAACGCCTTCCGCATCACAGACTTCTGTCCGTCACACCACAGCATTGCCACCATGGCGAGCTTGCCGGACCCAAAGGATGGCCCGTACCCTGATATGCACTTTGAGACGGAGGAGGATGCATATGTCTTCTACAACAGGTATGCTGAGCACGTTGGCTTCAGTGTTCGCCGCTCATACAAGAAGCGCAAGCGTGGGGTGATAGTGTCTCGGATCTTCGTTTGTTCTCGTGAGGGTGTTAGTGACCGTGCCAAGCAAGAGGGTATAACCACAGGCAGTACAAATGGTGGTACAGGGTTGTCAGGCACACCTAGGCCAGGCCCACCACCAACACGGACAGGATGCCAGGCGAGAATGGTCATCAAGATCACCCCGTGCCGGACATACCGCGTAGCCAAGTTCTTCCCAGAGCATAACCACCCACTCGCCAATCCGGATAATAGGACCATGTTTTCTGCTGATATACTCACAACTCTGAGGAAGGATAACTTGATTAATGATCTGAAAAAGGAGCTCAGTGAGCAGGAAGATATTCTACAGTTCTTAAGGCGCTATGAGGCCATTCTGGAGGAGCACCGCTCAAAGAAACTGCATGCTGATGTTGACAGCAGCCAGGTGACTTTGCCTATCCCGTCATTGAGAATGCTGAAGCAGGCCTCTAGTGCATATACACCTGAAGCTTTCAAGGCTATTCCGAGATGGGAAATCATGCTGTTGCTTCAAGCAGTCAAGCAATTTCTTTTGGAGGAAACCAACATCCTGACCATACAACACAAGCAAGAGGAGTTGCTCAGACAACAAACGCTGCACTTGAACCCCAGAATCATATGTGGCCCCAGCTGTCCAATTTTGCGGTATTGTGCTTGTGGGTACGAGCCAATTCTGGGCACCATCATGCGGAGCTCCGTTGCTAAACAGCATCCTTATGGACAGAGGACCACTTGGCGGGGAGATAGCAGCCCATACAGCACCATGAGTTCGGCTCAGAAGCTGGCATGTGAGGTTCACAGTCTGCATCCGACCATTGACAGAATTGGGGTAATATACAGCTTTTGA ATGTGCACGAATCTAGAGCTTGGGAGAAGCTGTGAAGGCTGCAGGCCAGAGAGGCGAAAGAGAATGAGAGGATTCGAGAGGAAAGGTGTCCGGCAGTACAACCGGTCGGAGGTGCCACGGATGCGGTGGACGGAGGAGCTGCACAGGCAGTTCGTCGAGGCCGTCGAGTGCCTTGGTGGCCAGGACGAAGCCACTCCAAAGCGAATTCTCCAGTTGATGGGCGTGAAGGGAGTTAGCATATCACATATCAAGAGCCATCTTCAGATGTATAGAAGCTCCAGCAACAGCAGTACCCATCAGGCCAGCCACCAGAAGTTGACATCAACCACTGCGAGCAACAGCAAGCGCGTGTTCTTGAACCGTGAAGGCCGCTGCTTTTACGCACCTCATGATGGAAACGCAGCAGCAGATTCAGACAAGAACATTTACACCATGCTCCGTAATTGCAGTCACGCATCACCATGCCAATTACCATCGCTAAAAGAAGTATTCAGTATGTGGGAACAAAGTAGGGGACGCGTTCCTCGGCACTCCAACGTGCTTACAACAGAAAAGGCGATTAGGCCAAGTCACACTTTCAACAAGAAGCCTGAGAAGCAAAAAAGCTGTGACCTGACGCTATCGATCGGCCCGTGGGGGGACGCGAGCAGCGACGCCGACGGCTCGAGCACGATCAGTGAGGAGCTTGCCTCGCAGCCAAGGGGCGAGTCATTCGGCTCTTCGGCGACAGGCGATTGCTTTGCCGCTGTGAAACAGGAGAGCATACCGGCTCTGAACCTGGACCTGACCATGTCGTCTTCATGGCTTGCCTGA ATGGACGCGGCGGTGTACGTGAACGCGAAGCAGTACGACGCCATCGTGCGGCGGCGGCAGAAGCGCGCGAGGGCGAACGCGACGAGGACGCCGGGCGTCGTCAACGCGAAACATCCGTCGCGGTCGGCGCACGCGAAGAACAGGATTCGCGGGAAGAATGGGAAATATTTGACCCGCGATGAATTGCTGCGCGGGCTGGGGGGGCCCGAGGGACGGGCGCGCGCGGAGGCGCGCGAGCGAGAGATCGCCGAGCGCGAGGCGAAGCGCGTCGAACGCGCCGCGGTGCGGGAAGCCACCAAGGCGCGCGCGCGCGCGCAGCGCGCCGCCGCCGACGCCGTGCGCGCGGCGAAAAAATCTAGAAAGTGA ATGGATGTGAATATGACATCGATGAGTAGTATCCAGGGTAATGATGCATCATGTGCTAGAGCTTTTAACATGCAGGGGACAGTGAGACCTCACCATCATCATCTGCAGCAGGAAAGGCTCCCTGGGCAGGGGTCATCAATAGGCTTCACTAGTAGCATTCATGAGAATACAGGGACTTCTCTAAACCATGAAAAGATGATCTCAACAGCAGATATGGGGAGGTCTGTAAGTGATGATGGTGATCCCAGTCTCCTGGAAGAAGTCTCCGAGGGCCGAAAGGATGCTAATGGAAGCAAAAAGAGTGGCTCGCCATGGCATCGTGTGAAATGGACTGACACAATGGTGAGGGTGTTGGTCACAGCTGTTTCCTACACAAATGAAGAGGCTGCTGCCGAGTTTGCCAGAGGACCGAGGAGGAAAAGCATTACATTGCAGAAAAAGGGAAAGTGGAAGGCCATCTCAAAGGTGATGACTGATAGAGGTTACTTTGTTTCACCCCAGCAGTGTGAGGACAAGTTCAATGATCTCAACAAGAAGTACAAGAGGCTGAACGACCTACTTGGGCGGGGGACCTCTTGTGAAGTTGTTGAGAATCCATCTCTGTTGGATATGGTGGATCATATATCTGAGAAAGCCAAGGAGGAAGTCAAAAGAATCCTGAGCTCAAAGCATTTGCATTACGAAGAGATGTGTTCTTACCATAATGGGAACCGTTTAAACCTGCCTCCTGACCCTGAGCTCCGGCATTCACTAAGACTCGCCCTGATGCTGAAAGATGATCAAGATGAGGAGGACAACGACATGAGATCTCATCTCAACAATGAGAATGGAGAGGGTGATCATAGCTCTCCTTTAGGAGGATCTGAGAAGAGAATGGATGATCTGTTAGGCAGTTCAAGCAAGAGGGGTAAGCATAATCACAACGCTGAACATTTTAGTCACAAGGGCTTCAGTAGTTTCCATGGTAATGATGGAAGGCAGACATCATCTGAAAGCACCCACGCTCCTCAGGAGCAGCTGGCAAGTCAAAGGAATCTGGAGGTGGAGGAACAGAGGCTGCGGATACATGAACAGATGGTGCAGCTGGAGAAAGAACGCCTCAAATGGATCGAATTTTCCATGCAAGAAGACGAGGAACTCAAAGCTATGAAAATCGAAATCCAGAGAATGAAGGTGGAAAACGAAAGAATGGCTCTGGAACTGAAACAAAAGGAAATGATTCTCGATACAACTTAA ATGGCCGCAGCCATAGACATGTACAAGTACTGCAATACCAGCGCACACCTTATCGCCTCCTCGTCCCCCTCGGATCAGGAGCTCGCGAAAGCACTCGAGCCTTTTATAACGAGTGCTTCCTCCCCCTACCATCGCTACTCGTTGGCCCCAGATTCTTACATGCCTACACCCTCCTCCTACACCACCTCGCCTCTTCCCACCCCCACCTCCTCGCCTTTCTCGCAGCTTCCGCCACTCTACTCGTCGCCTTACGCGGCTTCGACGGCGTCGGGCGTGGCTGGGCCGATGGGCCTGAACCAGCTCGGCCCGGCCCAGATCCAGCAGATCCAGGCCCAGCTCATGTTCCAGCACCAGCAGCAGAGGGGCCTGCACGCGGCGTTCCTGGGCCCGCGGGCGCAGCCGATGAAGCAGTCCGGGTCGCCGCCGGCGCAGTCGAAGCTGTACCGCGGCGTGCGCCAGCGCCACTGGGGCAAGTGGGTGGCGGAGATCCGCCTCCCCAAGAACCGCACGCGGCTGTGGCTCGGCACCTTCGACACCGCCGAGGGCGCGGCGCTGGCCTACGACGAGGCGGCCTTCCGCCTCCGCGGCGACACGGCGCGCCTCAACTTCCCGTCCCTCCGCCGCGGCGGCGGCGCGCGCCTCGCCGGCCCGCTCCACGCCTCCGTGGACGCCAAGCTCACCGCCATCTGCCAGTCCCTGGCGGGGTCCAAGAACAGCTCGTCCAGCGACGAGTCGGCCGCGTCCCTGCCGGACTCCCCCAAGTGCTCAGCGTCGACGGAGGGGGATGAGGACTCGGCCTCCGCCGGCTCCCCTCCTTCCCCGACGCAGGCGCCGCCCGTGCCGGAGATGGCGAAGCTGGACTTCACCGAGGCGCCGTGGGACGAAACGGAGGCCTTCCACCTGCGCAAGTACCCGTCCTGGGAGATCGACTGGGATTCCATCCTCTCATGA
Protein Sequence:
- >29323|Ostreococcus_lucimarinus|NF-YA|29323
MDAAVYVNAKQYDAIVRRRQKRARANATRTPGVVNAKHPSRSAHAKNRIRGKNGKYLTRDELLRGLGGPEGRARAEAREREIAEREAKRVERAAVREATKARARAQRAAADAVRAAKKSRK*