Information report for SMil_00020853-RA_Salv
Gene Details
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Functional Annotation
- Refseq: XP_011076693.1 — NF-X1-type zinc finger protein NFXL2
- Swissprot: Q9FFK8 — NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
- TrEMBL: A0A2G9GDU0 — A0A2G9GDU0_9LAMI; Transcription factor NF-X1
- STRING: XP_009586602.1 — (Nicotiana tomentosiformis)
- GO:0007623 — Biological Process — circadian rhythm
- GO:0009651 — Biological Process — response to salt stress
- GO:0009908 — Biological Process — flower development
- GO:0010310 — Biological Process — regulation of hydrogen peroxide metabolic process
- GO:0042335 — Biological Process — cuticle development
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:2000037 — Biological Process — regulation of stomatal complex patterning
- GO:0005634 — Cellular Component — nucleus
- GO:0000987 — Molecular Function — core promoter proximal region sequence-specific DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv2_023730_qswd.t1, Bv2_023730_qswd.t2
- Cicer arietinum: XP_004500492.1
- Cucumis melo: MELO3C008297P1
- Glycine max: Glyma.18G027000.1.p
- Lactuca sativa: Lsa016093
- Lotus japonicus: Lj6g3v0521560.1
- Manihot esculenta: Manes.10G012200.1.p
- Medicago truncatula: Medtr3g070780.1
- Nicotiana benthamiana: Niben101Scf02221g01001.1
- Nicotiana tabacum: XP_016462046.1
- Petunia inflata: Peinf101Scf09649g00006.1
- Ricinus communis: 28162.m000128
- Sesamum indicum: XP_011076693.1
- Solanum lycopersicum: Solyc06g051570.2.1
- Ziziphus jujuba: XP_015877400.1
Sequences
CDS Sequence:
- >SMil_00020853-RA_Salv|Salvia_miltiorrhiza|NF-X1|SMil_00020853-RA_Salv
ATGCTCTCCTCCGCCACCCAACCGCCGCAGCTCTCCTCTGACTCCGACTCGGACTCCGATACATCCTCCCTCTCCCATTCCCATCAGCGCCACCCTGACCTCTCCTCCTCCATCTTTCAATCCTACCTCTCCCATTCCAATTCTCGCAACACTGGCGATGATCTTCACCATCAAGATCTCATAAAAATCCAATCTTTTCTCACCTCCTCGCGCGCCGGCGGCCTCTCCTGCCTCATTTGCCTCGAACGCATCAAACCCACCGACCCAACTTGGTCCTGCTCCGCCCGCTGCTTCGCCATCTTCCACCTCCTCTGCATCCAGTCATGGGCCCACCAGTCCACCACCCTCGCCGCCTCTCGCGCCTCCGCACGCGCCGCCGTGGCCCCCGACGAGAACTCCTTCGTCTGGCCCTGCCCCAAGTGCCGCGTCGAGTACCCCAAACGCCAAACCCCCAAGAATTACTATTGCTTCTGCGGTAAAGTAGAGGACCCGCCTCGTGATCCCTGGGTTTTACCCCATTCTTGCGGGGAGGTTTGTGGAAGATCGTTGAAATATGATTGTGGGCATTTCTGTCTGCTGCTGTGCCACCCTGGGCCGTGCCCGGCCTGCCCGAAATTGGTTAAAAATAAGTGCTTTTGTGGGAAGTTGGAGGATGTCAGACGATGTGGATTGAAGTATTTCTCTTGTAAAGGTGTGTGTGGGAGGTTATTGGAGTGTGAAGCTCATAGATGTGGTGAGATTTGCCATGATGGATTGTGCCAGCCGTGTAGGGCGAAAGGGACTTATAGATGTCTATGTGGGAAGGAGGAGATGGCGAGGGAGTGCTATGAGAGGGAATTCAGATGCAATGGCGATTGCAAGAAGATGCTGAGCTGCGGAAGGCATGTTTGTGAGAAGGGGTGTCACGAGGGCGAGTGTGGGGATTGCCCGTTTCAAGGGAGGAGGACTTGCCCTTGCGGTAAGAGAGTGTATGAAGGGATGGCATGTGATGTTTCTCTGCCTCTGTGTGGGGCAACTTGCAATAAGCTATTGAGTTGTGGCTTCCATAGGTGCCCCGAGCGATGCCATCATGGGCCGTGCGTTGAGAACTGTAGGATGATTGTGACAAAGCCGTGTAGGTGTGGGAGCTTCAAGAAACAGGTTCCTTGCTATCAAGAGTTGACGTGTGAGAGGAAATGCCAGAAGCTTAGGGATTGTGGTCGGCATGCTTGTAAGCGCCGCTGCTGCGATGGGGACTGCCCTCCTTGCTCAGAGATGTGTGACCGGAAGCTCCGCTGTAGAAATCACAAGTGCCCAGCTCCATGTCATAGAGGTGCTTGTGCTCCTTGCCCACTGATGGTGAGGATATCATGTTCATGTGGCAACACACATTTTGAGGTTCCTTGTGGCACAGAAACTGAACAAAAACCTCCCAAGTGTCCGAAACCATGTCCAGTAGCTCCTTTATGCAGGCATGCTCCAAAATGCAAGGTTGTATGGTGCCATTATGGTGCTTGCCCCCCATGTCGCCTAACTTGTGGTGAAAGATACTCATGTGGCCATGAATGCCAATTAAGGTGCCATGGACCTATACCACCTCCACGTCCTGAATTTACTTTAAAACCAAAAAAGAAGAAGGGAAATTATGTGAGTGAAGCTACACCTGGTTCCCCATGTCCTCCTTGCCCAGAAGTTGTGTTGAGGTCATGCTTTGGTCATCACATAGGAGCAGAGAGGATGATGGTATGCTCAAATAGTGCCGAATTTCCTTGTGATAATTTGTGTGGAAATCCTCTTCCATGTGGTAACCATTACTGCACTTATGTATGTCATCCCATGAAAGATCATTCTTCGAAAATAGGCGAGTCCTGCGAAGTGTGTAATCTCCCTTGTCATAAGGATAGAGATCCTGAATGTCCACATCCTTGTCCTATGCGATGTCATCCTGGAGAATGCCCCCCTTGCAAGGCGCTGATTAGGCGTTCGTGTCACTGTGGGTCCATGGTGCATGTTTTTGAGTGTAAATATTTCAACTGCTTGTCAGAGAAAGAGCAAATGGCTGTTCGTTCGTGCAAAGGGCCTTGCCATAGGAAGTTGCCGAATTGTACACACTTGTGCCCAGAGACATGTCATCCTGGCCCCTGCCCGTTACCTGAGAAGTGCTCTAAGAAGGTAACTGTTCGTTGCGGATGTCAAACATTAAAGAAGGAGTGGTTATGTCAGGATGTGCAAGCGGCACACATTAGTGGTGGTTGCGATCCCAAAGAGATACCAAAGAATCAATTTGGAGTTGGACTTATTCCTTGTGGTTCCGATTGCAAGAGCAAAGTGAAGGCCCCCGACTCAGAGTTACATCTTCGTCAAGTGAAGCCCTCGGAGGCAAAGGAGTCGGATAAAGCTAATACAGTATCGAAACGGAGAAGACGAAGACAAAGGGTACACGAGGAGGAGAGTGCATCGAGGCTGCAGAAAATAGTTGGCGTGGCTCGACGGATCCTTGTGCTGCTCATCGTTGCTGTTGCTGTTGTTGTGTCTGCATATTTCGGCGAGGCTCGAGCCGTGCTCCAGCGAGCCCCTCCCCGTTGGCGAGCCAGGGGACTTGAGGCGGGCGCAAATTTGCGAGCCGGGCTCGTTGGGGAAGAAGGGCAACATTGTGCTTACACGCGCCCCTTTTTTTAA
Protein Sequence:
- >SMil_00020853-RA_Salv|Salvia_miltiorrhiza|NF-X1|SMil_00020853-RA_Salv
MLSSATQPPQLSSDSDSDSDTSSLSHSHQRHPDLSSSIFQSYLSHSNSRNTGDDLHHQDLIKIQSFLTSSRAGGLSCLICLERIKPTDPTWSCSARCFAIFHLLCIQSWAHQSTTLAASRASARAAVAPDENSFVWPCPKCRVEYPKRQTPKNYYCFCGKVEDPPRDPWVLPHSCGEVCGRSLKYDCGHFCLLLCHPGPCPACPKLVKNKCFCGKLEDVRRCGLKYFSCKGVCGRLLECEAHRCGEICHDGLCQPCRAKGTYRCLCGKEEMARECYEREFRCNGDCKKMLSCGRHVCEKGCHEGECGDCPFQGRRTCPCGKRVYEGMACDVSLPLCGATCNKLLSCGFHRCPERCHHGPCVENCRMIVTKPCRCGSFKKQVPCYQELTCERKCQKLRDCGRHACKRRCCDGDCPPCSEMCDRKLRCRNHKCPAPCHRGACAPCPLMVRISCSCGNTHFEVPCGTETEQKPPKCPKPCPVAPLCRHAPKCKVVWCHYGACPPCRLTCGERYSCGHECQLRCHGPIPPPRPEFTLKPKKKKGNYVSEATPGSPCPPCPEVVLRSCFGHHIGAERMMVCSNSAEFPCDNLCGNPLPCGNHYCTYVCHPMKDHSSKIGESCEVCNLPCHKDRDPECPHPCPMRCHPGECPPCKALIRRSCHCGSMVHVFECKYFNCLSEKEQMAVRSCKGPCHRKLPNCTHLCPETCHPGPCPLPEKCSKKVTVRCGCQTLKKEWLCQDVQAAHISGGCDPKEIPKNQFGVGLIPCGSDCKSKVKAPDSELHLRQVKPSEAKESDKANTVSKRRRRRQRVHEEESASRLQKIVGVARRILVLLIVAVAVVVSAYFGEARAVLQRAPPRWRARGLEAGANLRAGLVGEEGQHCAYTRPFF