Information report for NNU_005735-RA
Gene Details
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Functional Annotation
- Refseq: XP_010253736.1 — PREDICTED: NF-X1-type zinc finger protein NFXL2
- Swissprot: Q9FFK8 — NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
- TrEMBL: A0A1U7ZIL2 — A0A1U7ZIL2_NELNU; NF-X1-type zinc finger protein NFXL2
- STRING: XP_010253736.1 — (Nelumbo nucifera)
- GO:0007623 — Biological Process — circadian rhythm
- GO:0009651 — Biological Process — response to salt stress
- GO:0009908 — Biological Process — flower development
- GO:0010310 — Biological Process — regulation of hydrogen peroxide metabolic process
- GO:0042335 — Biological Process — cuticle development
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:2000037 — Biological Process — regulation of stomatal complex patterning
- GO:0005634 — Cellular Component — nucleus
- GO:0000987 — Molecular Function — core promoter proximal region sequence-specific DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn141391
- Beta vulgaris: Bv2_023730_qswd.t2, Bv2_023730_qswd.t1
- Cucumis melo: MELO3C008297P1
- Cucumis sativus: Cucsa.136670.1
- Glycine max: Glyma.18G027000.4.p, Glyma.18G027000.1.p, Glyma.18G027000.3.p, Glyma.18G027000.2.p
- Lotus japonicus: Lj6g3v0521560.1
- Malus domestica: MDP0000239523
- Medicago truncatula: Medtr3g070780.1
- Prunus mume: XP_008233759.1
- Pyrus bretschneideri: Pbr010904.1
- Solanum lycopersicum: Solyc06g051570.2.1
- Ziziphus jujuba: XP_015877400.1
Sequences
CDS Sequence:
- >NNU_005735-RA|Nelumbo_nucifera|NF-X1|NNU_005735-RA
ATGGCCTCAACAACCCAGCGTCTTTCTCTGTCGTCAGACTCAGATGCGGATTCCGACAACAGCACCGGGGGAGTAGACGAACTTCGGCATGATGATCTCTCCGACACCATCTTCAAATCATATTTACAAATCTCCGGTCAATCATCGCCTGATCTCTCCAAGATCCAAACGTTCCTCACCTCCTCCCGATCCGGGGCTCTGTCCTGCCTCATATGCCTCGAGAGAATCCGAACCTCTGATCCTACCTGGTCCTGCATCAATGGCTGTTTCGCTGTCTTCCACCTCCTTTGTATCCAAAGTTGGGCTCGCCAAGCTTCCGATCTCGCCACTGAACGAGCCGTCGCTCGCCTCTCCCGCGAACTCTTCCCTTTAGCTGCTGCCAAAGCCCTAGAAAATTCCAACTGGAGTTGTCCCAAATGCAGAGTAGAGTACTCGAAATCCCAAATTCCCCGAAGTTATTTCTGTTTCTGTGGCAAATTAGAGAATCCGCCCAGCGATCCTTGGATACTTCCGCATTCATGCGGTGAGATCTGCGGTCGGCCCCTCAGATACAATTGTGGCCACAATTGCTTCTTGTTATGTCACCCTGGTCCTTGTCCTTCGTGCCCGAAGCTCGTAAAAACCCGCTGCTTTTGTGGGACTGTCGAAGATGTTCGGCGATGCGGCTTCAAGAATTTTTCTTGTAACGGTGTTTGTTCGAAAGTACTGGATTGTGGGGTTCACCGGTGTTTGGAAATTTGCCATGAGGGTACTTGTCCTCCTTGTCGGGCGAGGGGTGTGTACCGTTGCCGGTGTGGGAAGACGAAGGAGGAGAGGGAGTGCTTTGAAAGAGAGTTTCGATGCGAGAATCCTTGTGAACGGATGCTTGGTTGTGGAAAGCATTTTTGTGCTGAGGGATGTCATTCGGATCCGTGTGGTGAGTGCCCTCTTCAGGGAAAAAGGATTTGTCCATGCGGGAAGAAGGTATACGAAGGAATGTCTTGTGATGTCGTGGTGCCGACTTGTGGATTGACTTGTGGTAAGATGCTGAGCTGCGGTCTTCATAGATGTCCTGAGCGGTGTCATCGCGGTCCATGCGTAGAGACTTGCAGGAATGTTACTGTGAAGTTTTGTAGGTGTGGGAGTTTGAAGAAAGAGGTTCCTTGCTATCAAGATTTGGCCTGTGAAAGGAAGTGTCAGCGAGTAAGAGATTGTGGACGACATGCTTGTAGGCGTCGCTGCTGTGATGGGGACTGCCCTCCTTGCTCAGAGGTGTATGTCACAGTGCTTGTTTAG
Protein Sequence:
- >NNU_005735-RA|Nelumbo_nucifera|NF-X1|NNU_005735-RA
MASTTQRLSLSSDSDADSDNSTGGVDELRHDDLSDTIFKSYLQISGQSSPDLSKIQTFLTSSRSGALSCLICLERIRTSDPTWSCINGCFAVFHLLCIQSWARQASDLATERAVARLSRELFPLAAAKALENSNWSCPKCRVEYSKSQIPRSYFCFCGKLENPPSDPWILPHSCGEICGRPLRYNCGHNCFLLCHPGPCPSCPKLVKTRCFCGTVEDVRRCGFKNFSCNGVCSKVLDCGVHRCLEICHEGTCPPCRARGVYRCRCGKTKEERECFEREFRCENPCERMLGCGKHFCAEGCHSDPCGECPLQGKRICPCGKKVYEGMSCDVVVPTCGLTCGKMLSCGLHRCPERCHRGPCVETCRNVTVKFCRCGSLKKEVPCYQDLACERKCQRVRDCGRHACRRRCCDGDCPPCSEVYVTVLV