Information report for MDP0000799893
Gene Details
|
|
Functional Annotation
- Refseq: XP_018503787.1 — PREDICTED: NF-X1-type zinc finger protein NFXL1-like
- Swissprot: Q9SY59 — NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
- TrEMBL: A0A498I5I7 — A0A498I5I7_MALDO; Uncharacterized protein
- STRING: XP_009360168.1 — (Pyrus x bretschneideri)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn088191, Achn320981
- Citrus sinensis: orange1.1g001378m, orange1.1g001377m, orange1.1g001376m
- Daucus carota: DCAR_003534
- Fragaria vesca: mrna09346.1-v1.0-hybrid
- Manihot esculenta: Manes.06G003200.2.p
- Nicotiana tabacum: XP_016451170.1, XP_016441573.1
- Populus trichocarpa: Potri.012G043700.1
- Prunus mume: XP_016651298.1
- Prunus persica: Prupe.5G236400.1.p
- Pyrus bretschneideri: Pbr038828.1, Pbr028356.1
- Ziziphus jujuba: XP_015902172.1, XP_015883792.1
Sequences
CDS Sequence:
- >MDP0000799893|Malus_domestica|NF-X1|MDP0000799893
ATGCTGGAAAGTTTGAGCTTGATTGGAATTAGATTTTTTCAGTGTGTGAATTCCTTTGGGGAGTTCTTTCTTTCTGATTCGATCGCCTATTTCGGCACACTGTCGGAGAATAGGAGGTTTGAGAGCTTGGTGGTTTCGCAGAATATGAGTTCTCATGTCCGAAATGATCGAAGGGATAGGTCCAGGTTTCCTGCTCAGCCTACTCAGCCTTCTCGTCGAGAGTGGGTGCCGAGAGGATCCAACCCTGCCATTGCCACTGCTGCCGTGAACCCGCCTCCACAAGTCAATCCAAACAACCTGAATGGCAACGTCAGCCAGCCTAATCCAAGATTCAATCCAAACAACCAGAATGGCAATGTCACCCAGCCTAATCTAAGATTCAATCCAAACAACCTGAATGGCAATGTCAGCCAGCCTACTCCAAGATTCAACCTGGACAACCCGAATAGCAATGTCAGCCAGCCTACTCCAAGATTCAACCTGGACAACCCGAATAGCAATGTCAGCCAGCCTAATCATAGCTCTGTTCCATCAGAGATTCGGCCGCATAGAGGAGGAAATAATGGCGTTAGAGGACAGGGTCGGCCGGTGAACCATAGAAGGGAGAGGGGAAGGAATGACAATCAAGAGGAGAAGGGATTGAAGGACTCAAATTTGCCCCAGCTTGTGCAAGAAATTCAGGATAAGCTGACGAAGGGCACTGTCGAGTGTATGATTTGTTATGATATGGTGAGGAGGTCTGCACCTGTTTGGTCCTGCTCAAGTTGCTACTCAATTTTCCATCTGRCTTGCATCAAGAAATGGGCTCGAGCTCCCACTTCTATYGACATGTCTGCGGGGAAGAATCAGGGGTTTAATTGGCGGTGTCCTGGATGTCAATCTGTACAGCTCACTTCGTCAAAGGAGATTCGGTATGATTGCTTTTGTGGCAAGAGGACAGACCCACCTTCAGATTTGTATTTGACACCACATTCATGYGGCGAGCCTTGCGGGAAGCAACTCGAGAGGGAGGTACCGGGTAAGGGTGTGAGTAAGGACGATCTTTGCCCTCACGTTTGTGTCTTGCAGTGCCACCCAGGTCCATGCCCTCCTTGTAAAGCATTTGCCCCTCCACGTTTATGCCCATGTGGAAAGAAAATAATCACAACAAGATGTTCCGACCGGACATCTGTTCTGACTTGTGGTCAGCATTGTAATAAGCTTCTTGATTGCTGGCGTCACCGCTGTGAGCGGACTTGCCATGTGGGTCCTTGTGATCCTTGTCAGGTTCTTGTTGATGCGTCCTGCTTTTGCMGGAAAAAGGTGGAGGTTGTTCTYTGTGGAGACATGACTGTGAAGGGAGAGGTGAAGGCAGAAGATGGTGTTTTTTCATGCAGTTCCACGTGTGGAAAAATGCTTAGCTGCGGTAATCATTCCTGCAGCGAAGTTTGCCATCCAGGGCCATGCGGAGATTGTAATTTAATGCCAAGTAAGATTAAGACATGCCACTGTGGGAAAACAAGCTTGCAAGAGGAACGACAGAGTTGTTTGGATCCGATTCCAACCTGTTCACAATTATGT
Protein Sequence:
- >MDP0000799893|Malus_domestica|NF-X1|MDP0000799893
MLESLSLIGIRFFQCVNSFGEFFLSDSIAYFGTLSENRRFESLVVSQNMSSHVRNDRRDRSRFPAQPTQPSRREWVPRGSNPAIATAAVNPPPQVNPNNLNGNVSQPNPRFNPNNQNGNVTQPNLRFNPNNLNGNVSQPTPRFNLDNPNSNVSQPTPRFNLDNPNSNVSQPNHSSVPSEIRPHRGGNNGVRGQGRPVNHRRERGRNDNQEEKGLKDSNLPQLVQEIQDKLTKGTVECMICYDMVRRSAPVWSCSSCYSIFHLXCIKKWARAPTSIDMSAGKNQGFNWRCPGCQSVQLTSSKEIRYDCFCGKRTDPPSDLYLTPHSCGEPCGKQLEREVPGKGVSKDDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKIITTRCSDRTSVLTCGQHCNKLLDCWRHRCERTCHVGPCDPCQVLVDASCFCXKKVEVVLCGDMTVKGEVKAEDGVFSCSSTCGKMLSCGNHSCSEVCHPGPCGDCNLMPSKIKTCHCGKTSLQEERQSCLDPIPTCSQLCX