Information report for Lsa016093
Gene Details
Functional Annotation
- Refseq: XP_023752902.1 — NF-X1-type zinc finger protein NFXL2
- Swissprot: Q9FFK8 — NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
- TrEMBL: A0A2J6M2B9 — A0A2J6M2B9_LACSA; Uncharacterized protein
- STRING: VIT_13s0067g00920.t01 — (Vitis vinifera)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv2_023730_qswd.t1, Bv2_023730_qswd.t2
- Cicer arietinum: XP_004500492.1
- Glycine max: Glyma.18G027000.1.p
- Juglans regia: WALNUT_00006300-RA
- Manihot esculenta: Manes.10G012200.1.p
- Nicotiana benthamiana: Niben101Scf02221g01001.1
- Nicotiana tabacum: XP_016462046.1
- Prunus mume: XP_008233759.1
- Prunus persica: Prupe.2G250200.1.p
- Pyrus bretschneideri: Pbr010904.1
- Ricinus communis: 28162.m000128
- Solanum lycopersicum: Solyc06g051570.2.1
- Ziziphus jujuba: XP_015877400.1
Sequences
CDS Sequence:
- >Lsa016093|Lactuca_sativa|NF-X1|gnl|UG|Lsa#S58695838;PUT-187a-Lactuca_sativa-37786
ATGACATCAACCGTCCGCCACCGTCTGCCACCCTCTCATCCTTCCGACTCCGACTCTTCCGACTCGGACTCCACTTCAACCACACCAAAACCCCTCAATCACACCGACTTTTCCAACACAATCTTCAGATCCTACGTCGAGATCTCCGGTCTTGAATCCCCGGACCTCACCAAAATCCGATCTTTCCTGACTTCGTCACGCTCCGGCGCCCTATCATGTCTCATCTGCCTCGAACGCATTCGTCCCACAGATCCCACTTGGTCCTGCTCCTCTCGTTGCTTCGCCGTCTTTCACCTCCTCTGCATCCAGTCATGGGCCCGCCAGTCCTCCGATCTATCGTCACTACGCGCCGCCGCTCGTGGCGCAGATGATCGCAATTCGACTTGGAACTGCCCTAAATGCCGTATCGAGTTCCCCAAAACCCTGATCCCGAAGACATACACTTGTTTCTGCGGTAAATTCGAAAATCCGCCTCACGATCCTTGGATTTTACCTCATTCTTGCGGAGAAATCTGTAACCGTTCGTTGAAATACGACTGTGGACACAAATGTTTGCTTCTATGCCACCCAGGACCCTGCCCCTCCTGCCCTAAGCTCGTTAAAACCCGTTGCTTTTGCGGAGGTGTTGAAGATACCAAACGCTGCGGATTTAAGGACTTTTCGTGTAACAAAACTTGCTCAAAGCTATTAGATTGTAAAACACATTGCTGTCCAGAAACATGTCATCCCGGCGGATGTCCGCCTTGTAAAGCTACAGGAGTCTATAACTGTCATTGCGGTAAGGCAACAGAGAAAAGAGAGTGTTTTCAGAGGGATTTCAGGTGTGAGACTCCATGTGAGAAGCTTCTTGGATGTGGGAAACATGTATGTAGCAAAGGGTGTCACGAAGGTGAATGTGGTGATTGCCCTTTGCAGGGGAAACGAACTTGCCCATGTGGCAAACGGATTTATGAGGGAATGGCTTGTGATGTTGTGGTGCCATCGTGTGGTGGGACATGTGACAAGAAGCTGATGTGTCGAATCCATAGTTGTCCTGAAAGGTGTCACCGTGGGCTTTGTGTTGAATCTTGTAGGATTGTTGTCATGAAGTCTTGTAAATGTGGGAGCTTGAAGAAACAGAATAGGTTCCTTGTTNATCAAGATGTAGTATGTGAAAGGAAATGTCAACGTGTGCGGGATTGTGGACGCCATGCATGCAAAAGGAGATGTTGTGATGGTGATTGTCCTCCTTGTTCAGAGATATGTGACAAGAAGCTAAGATGCAAGAATCATAAATGCCCATCTCCTTGCCATAGAGGTGCTTGTGCTCCATGTCCAGTAATGGTGACTATTTCATGTTTCTGTGGTGAGACACACTTTGAGGTTCCTTGTGGTACTGAAAAGGAGCAAAAACCTCCTAAATGTTCCAAGCGATGTCAAATAACCCCTTTATGCAGGCATAAGTCAATTACTAAGCCACATAAGTGCCATTATGGAGCATGTCCACCATGTCGTTTGGTTTGTGATGAAGAATACCCTTGTGGCCATAGATGCAAACTAAAGTGCCATGGTCCTATACCTCCTCCTAACCCCGAGTTTACATTGAAACCCAAGAAAAAGAAACAAAAGCTTCAAACTGAAACAACTCCTGGTTCTTCATGCCCACCTTGTCCAGAACTTGTTTGGAGATCATGCCTTGGTCAACATCTTGGAGCTGAAAAAATGATGGTGTGTTCAAACAAATCAAAATTTTCATGTGATAATTATTGTGGAAACCTTCTGCCATGTGGCAATCATTTTTGCACAAAAACCTGCCACGCCCTCAAGATTCCTGGATCAGGAGGCGAGCAATGTGAGGACTGCAATCTACCTTGCCAACGGGAGAGGGATCCTTTATGTCCACATCCCTGTCCCCGAAAATGTCATCCTGGAGATTGTCCGCCTTGCAAGGTGCTGATAAAGAGATCGTGTCATTGTGGTGCTATGGTTCATGTTTTTGAGTGCTTGTATTACAATACCTTGTCTGAAAAGGAACAGACAGCTGTCCGTTCTTGTGGTGGACCCTGTCACAAAAAGTTACCTAACTGCACACATTTGTGTCCGGAGACATGTCATATTGGTCATTGTCCATCACCAGAAAAATGCTCCAAAAAGGTTATAGTAAGATGCGGGTGTCAAAGTTTGAAAAAAGAGTGGGCATGTCATCAAGTACAAGCCACATATATCAATAATGGGCGTGATCCAAAAGATATAACCAAAAATCAATTTGGTGTTGGACTTCTTCCATGCAATTCAGAATGCAAGAGTAAACTCAAAGTTGATGATCCTGACTTGCATCTCCGCAAACCTAAAGCTCCTGAGAAAAAGGAGACGGATGTGGAGAATCATGTACGGAAACGTAAAAGAAGGAAAGAGAAATTACAACAAGACCTTCAACTTTCAATGTTTCAGAAAGTTATGGGGATTTTTTGGAAGCTATTGGTGTTGGTTATGATTGTGGTGAGTTTGATTTTAATGGCGTATTTTGGTTACAAAGGGTTGTTATGGGTGAATGATTGGATGAATGAAGTGGAAATACAAAGACAGAGAAAGAGATATCCGAGAATGTAA
Protein Sequence:
- >Lsa016093|Lactuca_sativa|NF-X1|gnl|UG|Lsa#S58695838;PUT-187a-Lactuca_sativa-37786
MTSTVRHRLPPSHPSDSDSSDSDSTSTTPKPLNHTDFSNTIFRSYVEISGLESPDLTKIRSFLTSSRSGALSCLICLERIRPTDPTWSCSSRCFAVFHLLCIQSWARQSSDLSSLRAAARGADDRNSTWNCPKCRIEFPKTLIPKTYTCFCGKFENPPHDPWILPHSCGEICNRSLKYDCGHKCLLLCHPGPCPSCPKLVKTRCFCGGVEDTKRCGFKDFSCNKTCSKLLDCKTHCCPETCHPGGCPPCKATGVYNCHCGKATEKRECFQRDFRCETPCEKLLGCGKHVCSKGCHEGECGDCPLQGKRTCPCGKRIYEGMACDVVVPSCGGTCDKKLMCRIHSCPERCHRGLCVESCRIVVMKSCKCGSLKKQNRFLVXQDVVCERKCQRVRDCGRHACKRRCCDGDCPPCSEICDKKLRCKNHKCPSPCHRGACAPCPVMVTISCFCGETHFEVPCGTEKEQKPPKCSKRCQITPLCRHKSITKPHKCHYGACPPCRLVCDEEYPCGHRCKLKCHGPIPPPNPEFTLKPKKKKQKLQTETTPGSSCPPCPELVWRSCLGQHLGAEKMMVCSNKSKFSCDNYCGNLLPCGNHFCTKTCHALKIPGSGGEQCEDCNLPCQRERDPLCPHPCPRKCHPGDCPPCKVLIKRSCHCGAMVHVFECLYYNTLSEKEQTAVRSCGGPCHKKLPNCTHLCPETCHIGHCPSPEKCSKKVIVRCGCQSLKKEWACHQVQATYINNGRDPKDITKNQFGVGLLPCNSECKSKLKVDDPDLHLRKPKAPEKKETDVENHVRKRKRRKEKLQQDLQLSMFQKVMGIFWKLLVLVMIVVSLILMAYFGYKGLLWVNDWMNEVEIQRQRKRYPRM