Information report for GSVIVT01014100001
Gene Details
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Functional Annotation
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0009706 — Cellular Component — chloroplast inner membrane
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004503253.1, XP_004503254.1
- Gossypium arboreum: Cotton_A_27607_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G0490, Gh_D09G0497
- Nicotiana benthamiana: Niben101Scf05912g02001.1
- Nicotiana tabacum: XP_016451170.1
- Petunia inflata: Peinf101Scf01633g06011.1
- Prunus mume: XP_016651298.1
- Prunus persica: Prupe.5G236400.1.p
- Solanum melongena: Sme2.5_01565.1_g00004.1
- Solanum tuberosum: PGSC0003DMP400024937
- Ziziphus jujuba: XP_015883792.1, XP_015902172.1
Sequences
CDS Sequence:
- >GSVIVT01014100001|Vitis_vinifera|NF-X1|GSVIVT01014100001
ATGGGCATGGAGAGCCTTGTGGGAAGCCACTCAATCGAGAGATTATGGGTTCTAGTGAGAGTAATGAGGATTTTTGCCCTCATGTCTGTCTTGCAACGCCACCCAGGTCCATGCCCTCCGTGTAAGGCTTTTGCACCGCCTCAGTTGTGCCCTTCGGAGGAGAAATTTACCTGTGAGAAACCTTGTGGGCGGAAGAAGAACTGTGGAAGGCACTGTTGTAGTGAACGGTGTTGTCCTCTCTCTAATTCTGGCAACGTTCTCTCTGGTGATTGGGATCCGCACTTATGTTCAATGACATGTGGAAAGAAACTAAGGTGTGGACAACACTCTTGTGAAAATCTTTGTCATAGTGGCCATTGTCCTCCTTGCCTTGAAACAATCTTTATTGATTTAACATGTGCATGTGGGAGAACTTCAATCGCTCCTCCATTGCCTTGTGGTACCCCCACTCCATCATGTCAGCACCCATGCTCAATTCCTCAGCCATGTGGTCATTTATCTTCTCACAACTGCCACTTTGGAGACTGCCCACCTTATTCAATTCTTATAGCCAAGGAGTGCATTGGTGGACATGTGGTTCTCAAGAACATCCCTTGTGGGTCAATGGATATTAGATGTAACAAGCTTTGCAGCAAGACCAAACAATGTGGTATGCATGCTTGTAGGAGAACTTGTCACCCTTCTTGTGATTCTTCCTATGCATCTGGTTCTGGTTTGAAGTCTTCATGTGGCCAGACATGTGGTGCTTCGAGGAGAGATTGCAGGCATACATGCATTGCCCCTTGTCACCCTTCATCTCTTTGTCCTGATTCAAGATGTGATTTCCCTGTCACAATCACTTGTTCTTGTGGCCGAATAAGTGCAACTGTTCCTTGTGATGCTGGAGGCAGCAGTGTGGGCCGAAATGCGGGGATGATAATTAAGAAAGATATTTCACTACTACAAATTTACCAAAAAAGTGGACAGAATCCATCAATATTACATACTACTCCTTGCTTACTCCACACTCAAACCCAGTACGCTTCTCAAACCCGGAGAAAAATGGCACTCTCAACGACTCTTTTCAGATTTCCTCCGATCCCACTCCAACAGTTCCACCACACCTCTTCCACCAAAAGACTTCTCTACCCCCGGATCAGCCCCCAATTCCCCAAAATGCCTCTCACCGCCAAGGCTCTCCCTAACCCTGTCCCTGGATTTAGGGGGGCAGTTTCGGAAGCCATCGCTCTCATCCAATCGTCACCCGCCACGTGGAAGTCGGCTCTTCTCAACAACTTCCTCATCTTCATTGCCGGCGCTCCGATCCTCGTCTCCGGCCTCTCGCTATCCGGCATCGCCGCCGCCTTCTTGCTCGGGACGCTGACATGGCGCGCCTTTGGATCACCTGGGTTTCTGCTCGTGGCTACATACTTCGTTATTGGGACGGCAGCCACAAAGGTGAAAATGGCACAGAAAGAGGCTCAAGGGGTTGCTGAGAAGAGGAAAGGAAGAAGAGGGCCTGGTAGTGTTATTGGTTCTAGTGCTGCTGGTTGTGTTTGTGCTTTTCTTTCCATATATGGGGTAGGGGGAGAGGCATTTTTGCAGCTTTGGCAACTTGGATTTGTTGCCAGTTTCTGTACTAAACTGAGTGATACTGTCTCAAGTGAGATAGGCAAGGCATATGGGAAAACAACGTACCTAGTTACAACATTGAAGATAGTTCCAAGAGGAACAGAAGGGGCTGTAAGTGCTGAGGGAACCTCTGCTGGACTTTTAGCATCAATTCTTCTTGCTTTTGTTGGTTGTCTCATGGGTCAGATTGATGCAGTGGAAGCAGTAATATGTGTAGTAGCTGCCCAGATTGCTAACCTTGGTGAGAGCTTTATCGGTGCTGCACTCCAGGGGAAGGAAGGATTTCGATGGCTCAACAATGATGTGGTCAATGTAATCAATATATCCATGGGCAGCATTTTAGCAATCTTGATACAGAAAATACTCCGCGGATTTTAA
Protein Sequence:
- >GSVIVT01014100001|Vitis_vinifera|NF-X1|GSVIVT01014100001
MGMESLVGSHSIERLWVLVRVMRIFALMSVLQRHPGPCPPCKAFAPPQLCPSEEKFTCEKPCGRKKNCGRHCCSERCCPLSNSGNVLSGDWDPHLCSMTCGKKLRCGQHSCENLCHSGHCPPCLETIFIDLTCACGRTSIAPPLPCGTPTPSCQHPCSIPQPCGHLSSHNCHFGDCPPYSILIAKECIGGHVVLKNIPCGSMDIRCNKLCSKTKQCGMHACRRTCHPSCDSSYASGSGLKSSCGQTCGASRRDCRHTCIAPCHPSSLCPDSRCDFPVTITCSCGRISATVPCDAGGSSVGRNAGMIIKKDISLLQIYQKSGQNPSILHTTPCLLHTQTQYASQTRRKMALSTTLFRFPPIPLQQFHHTSSTKRLLYPRISPQFPKMPLTAKALPNPVPGFRGAVSEAIALIQSSPATWKSALLNNFLIFIAGAPILVSGLSLSGIAAAFLLGTLTWRAFGSPGFLLVATYFVIGTAATKVKMAQKEAQGVAEKRKGRRGPGSVIGSSAAGCVCAFLSIYGVGGEAFLQLWQLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTLKIVPRGTEGAVSAEGTSAGLLASILLAFVGCLMGQIDAVEAVICVVAAQIANLGESFIGAALQGKEGFRWLNNDVVNVINISMGSILAILIQKILRGF*