Information report for GSBRNA2T00012840001
Gene Details
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Functional Annotation
- Refseq: XP_013706028.1 — NF-X1-type zinc finger protein NFXL1-like
- Swissprot: Q9SY59 — NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
- TrEMBL: A0A078G2A9 — A0A078G2A9_BRANA; BnaC08g14030D protein
- STRING: Bo8g059130.1 — (Brassica oleracea)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0000166 — Molecular Function — nucleotide binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >GSBRNA2T00012840001|Brassica_napus|NF-X1|GSBRNA2T00012840001
ATGATTTGTTATGACATGGTTGGACGGTCTGCGAATATATGGTCTTGCTCAAGCTGTTACTCCATCTTCCACATGCATTGTATCAAGAAGTGGGCTCGAGCACCGACTTCTGTTGATCTGTTGGCTGAGAAGAATCAAGGCGATAATTGGAGGTGTCCTGGTTGTCAATCTGTGCAGCTGACGTCGTCAAGAGAGATATTCTATAGGTGCTTTTGTGGGAAGAGAAAGGATCCTCCATCTGATCCGTATCTGACTCCTCACTCATGCGGGGAGCCATGTGGGAAGCCGCTGGAGAGAGAGGTTTCTGCAATAGCTGAGATGGATAGAGATGATCTTTGTCCTCATGTCTGTGTCCTGCAGTGTCACCCTGGTCCATGTCCTCCCTGTAAAGCGTTTGCTCCACCTCGGAGTTGTCCTTGTGGCAAAAAGATGATTCATACTCGATGCTCTGAGCGGAGATCTGTTCTTGTTTGTGGGCAGCGTTGCGAGAAGCTTCTCGACTGTGGGCGTCATCGGTGTGAAAGGACTTGTCACGTTGGCCCTTGTGATCCTTGTCAGGTACCAGTAAGTGCCACTTGTTTCTGCAAGAAAAAAGCGGAGACTGTTATTTGCGGAGAGATGAACGTGAAGGGAGAGTTGAAAGCAGACGATGGTGTGTATTCATGCAATTTTAACTGTGGGAAGCCTCTTGGATGTGGTAATCATTTCTGCTCCGAGGTTTGTCATCCTGGACCTTGCGGGGACTGTGAGTTACTGCCCAGTAGAGTTAAGACGTGCTATTGTGGAAAAACGCGTCTAGAAGAGCAGAGCAGGAGTAGTTGCTTGGACCCGATTCCTTCTTGTTCAAACACGTGCAGGAAGGTTCTTCCGTGTGGGTTACATACTTGCAACGAAGTTTGCCATTCGGGTGATTGCCCTCCTTGTTTAGTCAAAGTCAACCAGAAATGCCGGTGTGGGTCATCATTCAGGACCGTGGAATGCTACTTCACAACCTCTTCGGAGACGGAGAAGTTTGTGTGCGCTAAGTCATGCGGGCGTAAGAAAAACTGTGGGAGGCATAGATGTAGCGAGCGTTGCTGCCCTCTCTTGAACGCGAAGAAAAATGATCTATCTGGTGATTGGGACCCACACGCCTGTCAGTTACCATGTGGGAAGAACCTAAGGTGCGGACAGCATTCTTGTGAATCGTCATGTCACAGTGGCCATTGTCCTCCTTGCCTCGAAATGATATTCACTGATCTTACATGTGCTTGTGGAAGAACTTCGATTCCTCCACCACTACCTTGTGGGACACCTGTTCCGAGCTGCCAGCTTCCATGCTCGATTCCTCAGCCTTGTGGCCATTCTGCTACGCATGGATGCCATTTTGGAGATTGCCCTCCTTGTTCTGCCCCCGTGGAAAAGAAATGTGTTGGTGGTCACGTGGTTCTCAGAAACATACCTTGTGGGTTGAAAGACATTAGATGTAACAAGATCTGTGGCAAGACGAGACGTTGTGGCTTGCATGCTTGTGCCAGAACCTGTCACCCAGAGCCTTGTGACGGTTACAATGAATCTGAAGCAGTTTCGCGTGTTACATGTGGACAGACATGTGGTGCTCCTAGAAGAGATTGCAGGCACGTTTGTGCAGCACTATGCCATCCTTCTTTGCCTTGCCCTGACTCGAGATGTGAGTTTCCAGTTACAATTACATGTTCTTGTGGTCGCTTAACTGCCACAGTCCCTTGTGATGCTGGAGGAGAAAGCGCCGGCAATCTTCGTGTTGGTTCTGTCAATGAAACCTCTGTTTTGAATAAGCTTCCAACGCCACTTCAGCCTGTTGAGTCGAGCGATAACCGAATCCCTCTCGGGCAGAGAAAGCTTTCGTGTGATGATGAGTGTGCTAAGCAGGAGCGTAAGAGGGTTCTTCAGGATGCGTTTGACATCACAACTCCAAATCTTGACTCATTACATTTCAGCGAGAACTCTGCTATGACAGAGATAATTTCAGACATCTATAGGCGTGATCCGAAGTGGGTACTGGCTGTTGAAGAGCGCTTCAAGTTCCTGGTACTTGGGAAAGCCAGAGGAAGCACAAGTGCCCTCAAGGTCCATGTCTTCTGCCCAATGCAAAAGGATAAACTAGACACGGTTCGGCTTCTAGCTGAGAGGTGGAAACTTGCGGTTAGCAACGGAGGGTGGGAGCCAAAAAAGTTTATAGTTGTTCACGTTACACAAAAGTCGAAACCTCCAACACGGATCATTGGAGCTAGGGGTGGTGCTATCTCAGTAGGCGGGCCTCACCCACCGTCCTTTGATCCGCTGGTGGATATGGATCCTAGGCTTGTGGTTTCTTTATTGGATCTCCCGAGGGAGGCGAATGTCAGCGCGGTGGTACTGAGATTTGGGGGTGAGTGTGAGCTTGTTTGGCTGAATGACAAGAACGCTTTGGCCGTGTTCCACGACCCTGCTCGAGCCGCCACTGCCATGAGGAGGCTGGACCACGGTTCTGTATACAATGGAGCCGTGGTTGTCCAGAACGCCGCGCAATCTCAGTCACTCGGTAATAATGCATGGGGAAAACTACCCAGCAGCTCATCCTGGGATGTCCAGAAAGCAAATCCATGGAAGAAAGCAGTGATTCAGGAGAGTGATGACTCATGGGGAGCTGATGATTCCCCCATTGGAGGATCATCTACAGATACTCAAGCCTATGCGTGGCGATCAGCAACGAGCAACGCTCCAATCGTCACCTCAGCTAACCGTTGGAGTGTATTGGAGCCAGAGAAGCCCAAAACTTCCGCTTTGGAGCCATTGGTTCAGTCAGGAGAGAGCAGCAGCTCAGAAGCTACCGGTAAAAAGCTGGTGGAAGGCTCTGGGGAAGAAGTGGTAGATGATTGGGAGAAGGTATGCGAGTGA
Protein Sequence:
- >GSBRNA2T00012840001|Brassica_napus|NF-X1|GSBRNA2T00012840001
MICYDMVGRSANIWSCSSCYSIFHMHCIKKWARAPTSVDLLAEKNQGDNWRCPGCQSVQLTSSREIFYRCFCGKRKDPPSDPYLTPHSCGEPCGKPLEREVSAIAEMDRDDLCPHVCVLQCHPGPCPPCKAFAPPRSCPCGKKMIHTRCSERRSVLVCGQRCEKLLDCGRHRCERTCHVGPCDPCQVPVSATCFCKKKAETVICGEMNVKGELKADDGVYSCNFNCGKPLGCGNHFCSEVCHPGPCGDCELLPSRVKTCYCGKTRLEEQSRSSCLDPIPSCSNTCRKVLPCGLHTCNEVCHSGDCPPCLVKVNQKCRCGSSFRTVECYFTTSSETEKFVCAKSCGRKKNCGRHRCSERCCPLLNAKKNDLSGDWDPHACQLPCGKNLRCGQHSCESSCHSGHCPPCLEMIFTDLTCACGRTSIPPPLPCGTPVPSCQLPCSIPQPCGHSATHGCHFGDCPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKICGKTRRCGLHACARTCHPEPCDGYNESEAVSRVTCGQTCGAPRRDCRHVCAALCHPSLPCPDSRCEFPVTITCSCGRLTATVPCDAGGESAGNLRVGSVNETSVLNKLPTPLQPVESSDNRIPLGQRKLSCDDECAKQERKRVLQDAFDITTPNLDSLHFSENSAMTEIISDIYRRDPKWVLAVEERFKFLVLGKARGSTSALKVHVFCPMQKDKLDTVRLLAERWKLAVSNGGWEPKKFIVVHVTQKSKPPTRIIGARGGAISVGGPHPPSFDPLVDMDPRLVVSLLDLPREANVSAVVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHGSVYNGAVVVQNAAQSQSLGNNAWGKLPSSSSWDVQKANPWKKAVIQESDDSWGADDSPIGGSSTDTQAYAWRSATSNAPIVTSANRWSVLEPEKPKTSALEPLVQSGESSSSEATGKKLVEGSGEEVVDDWEKVCE*