Gene Details:

  • Gene ID: Glyma.11G230200.1.p
  • Gene Name: GLYMA_11G230200
  • Gene Family: NF-X1 Family
  • Description: NF-X1 Family protein
  • Species: Glycine max
  • Source: NF-X1 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_028197770.1  — NF-X1-type zinc finger protein NFXL2-like
  • Swissprot:  Q9FFK8  — NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
  • TrEMBL:  I1LMS0  — I1LMS0_SOYBN; Uncharacterized protein
  • STRING:  GLYMA11G35320.1  — (Glycine max)

Gene Ontology:

  • GO:0000122  — Biological Process — negative regulation of transcription from RNA polymerase II promoter
  • GO:0005634  — Cellular Component — nucleus
  • GO:0016021  — Cellular Component — integral component of membrane
  • GO:0000977  — Molecular Function — RNA polymerase II regulatory region sequence-specific DNA binding
  • GO:0001078  — Molecular Function — transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
  • GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

  • The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
  • The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.

Literature:

Sequences:

CDS Sequence:
  • >Glyma.11G230200.1.p|Glycine_max|NF-X1|Glyma.11G230200.1.p
    ATGACATCACCGTGGAATAAGATTCACATTCACCACTCTCACCCTTCCCCTTCCCCGCCACCGCCACTTTCCGACTCCGACTCCGACGACTGCGGCGGCGATTCCTCCTCCTCCGCCCCCCTCCGCCACTCTGATCTCTCCGACTCCATCTTCAAGCCCTACCTCGAACTCTCCGGCCACTCCGGTGCCGACCTCTCGAAGATCCAATCCTTCCTGACCTCCTCCTCCGCCGGCGCTCTCTCCTGCCTCATCTGCCTCGAACGCATCAAACCCTCCGACCCCACCTGGTCCTGCTCCTCCCTCTGCTTCGCCGTCTTCCACCTCTTCTGCATCCAGAGCTGGGCTCGCCAAGCCTCCGACCTTGCCGCCGCCCGCGCCGCCACGCGCCTTCCTATTTCCCCCGCCACTGCCTCCGCCTCCGCCCTCTGGAACTGCCCCAAATGCAGATCCGAATACCCCAAATCTCACATTCCCAAAACCTATTTCTGCTTCTGCGGCAAAATAGAGAACCCTCCTAACGATCCATGGATTTTACCTCACTCTTGCGGCGAGGTATGTGGAAGACCGTTGAAGCACATTAAAGTTCGATGCTTATGCGGGTGCCTTGAAGATGTTCGGCGATGTGGCTTCAAGGAATTTTCGTGTAACAAACCCTGTTCCAAGTTTTTAGATTGTGGGGTTCACCGTTGCATTGAGCTTTGCCACCCTGGCGCTTGCCCTCCTTGCCGGACACGTGGAGTGCACGCGTGCCAGTGTGCGAAGGTTAAAGAGGAGAGGGAGTGCTGTGATCGTGTTTTCCAGTGTGGGAATCCGTGTGAGAAGAGGCTTGGCTGTGGGAAGCATGTTTGTGAGAGAGGGTGCCATTCTGGTAAGTGTGGTGAGTGTCCCCTTAAGGGGAAGAGAACGTGCCCTTGTGGGAAAAGGGTTTATGAAGGAATGCCTTGTGATGCTCCTGTGCAGCTATGTGGAGCTACCTGTGATAAGATGTTGCCATGTGGCTACCACAGGTGCCCTGAGCGGTGCCACCGTGGACAGTGCGTTGAGACTTGCAGGGTTGTTGTGAAGAAGTCATGTCGTTGTGGCAGCCTCAAGAAAGATGTTCCTTGCTATCAAGATTTGGCGTGCGAAAGGAAGTGTCAGAGGATGCGTGACTGCGGTCGGCATGCTTGTAAGCGGCGCTGCTGTGATGGCGATTGCCCTCCCTGCTCTGAGATATGCGGCAGGAAGCTTCGATGTAAGAACCATAAATGCCCTTCTCCATGCCATAGAGGGCCTTGTGCTCCTTGCCCAATAATGGTGACAATTTCATGTGCATGTGGAGAGACACGTTTTGAGGTTCCTTGTGGTACCGAAATGGACAATAAGCCACCTAGATGTCCTAAACCATGTCCTATCACTCCTTTATGTCGGCATGCATCAAATATCAAGCCACATAAATGCCATTATGGAGCCTGCCATCCTTGTCGGCTACCTTGTGCCAAAGAGTACCAATGTGGTCATACATGCAAATTAAGGTGTCATGGTGCTAAGCCTCCTCCTAATCCAGAGTTTACTCTTAAACCAAAGAAAAAGAAGATTATACAACAAAGTGAAAGTGTTCCTGGCACTCCATGCCCTCCGTGCCCAGAACTTGTGTGGAGATCATGTGTTGGGAAACACATTGGAGCTGAGAGAATGATGGTCTGCTCTGATAAATCACAGTTCTCCTGTGAAAATTTATGTGGTAATCCTGTACCATGTGGTAATCATTATTGTACAAAAACCTGCCATGCCTTGGAGAACCAGTTACAAGGAAGCCAACCTTGTGAAGATTGTTATCTTTCTTGCCAAAAGGAAAGAGAGCCTGCATGTCCACATCACTGCCCTCGGCGATGCCATCCTGGAGACTGTCCTCCATGCAAGGTGCTCATTAAACGGTCATGTCACTGTGGTGCAATGGTCCATGTGTTTGAGTGCCTATATTACAACAGCTTGTCTGCAAAGGGTCAAGAGACTGTCCGCTCATGTGGTGGGCCATGTCACAGAAAGTTGCCAAATTGTACACATTTATGCCCAGAGACATGTCATTCTGGTCAATGCACAAATGCTGAGAAATGCTGTAAAAAGGTCACTGTTCGATGCAAATGCCATACATTGAAAAAGGAGTGGGTTTGTCAAGATGTTCAAGCAGCATATCATCTTGCTGGTTGCCATCCTAGGGATATTCCAAAAAATCAATTTGGAATTGGACTCATTCCTTGCAATTCTGATTGTAACAGTAAAGTGCAGGTTGTTGAGTCAGAACAACAATTGCGTAAAACTAGAGTTACAGAGGTACAAGAGCCAGATGTAGAAAAATCAGTTCGGAAGCGGCGAAAAAGGCGGGAACAAGTTCTAGAATCCAAGGAAACTTCAAAACTACAGAAAATTATTTCAAGAATGAAGCGGCTTCTTCTATTTGTCTTTATTTTGGTCATACTTCTTGCTGCTACATATTATGGGTACAAGGGACTTTTATGGCTCAATGATTGGATGAATGAAGTGGATGAACGAAGACAAAGATATTCTAGAATCAAATGA
Protein Sequence:
  • >Glyma.11G230200.1.p|Glycine_max|NF-X1|Glyma.11G230200.1.p
    MTSPWNKIHIHHSHPSPSPPPPLSDSDSDDCGGDSSSSAPLRHSDLSDSIFKPYLELSGHSGADLSKIQSFLTSSSAGALSCLICLERIKPSDPTWSCSSLCFAVFHLFCIQSWARQASDLAAARAATRLPISPATASASALWNCPKCRSEYPKSHIPKTYFCFCGKIENPPNDPWILPHSCGEVCGRPLKHIKVRCLCGCLEDVRRCGFKEFSCNKPCSKFLDCGVHRCIELCHPGACPPCRTRGVHACQCAKVKEERECCDRVFQCGNPCEKRLGCGKHVCERGCHSGKCGECPLKGKRTCPCGKRVYEGMPCDAPVQLCGATCDKMLPCGYHRCPERCHRGQCVETCRVVVKKSCRCGSLKKDVPCYQDLACERKCQRMRDCGRHACKRRCCDGDCPPCSEICGRKLRCKNHKCPSPCHRGPCAPCPIMVTISCACGETRFEVPCGTEMDNKPPRCPKPCPITPLCRHASNIKPHKCHYGACHPCRLPCAKEYQCGHTCKLRCHGAKPPPNPEFTLKPKKKKIIQQSESVPGTPCPPCPELVWRSCVGKHIGAERMMVCSDKSQFSCENLCGNPVPCGNHYCTKTCHALENQLQGSQPCEDCYLSCQKEREPACPHHCPRRCHPGDCPPCKVLIKRSCHCGAMVHVFECLYYNSLSAKGQETVRSCGGPCHRKLPNCTHLCPETCHSGQCTNAEKCCKKVTVRCKCHTLKKEWVCQDVQAAYHLAGCHPRDIPKNQFGIGLIPCNSDCNSKVQVVESEQQLRKTRVTEVQEPDVEKSVRKRRKRREQVLESKETSKLQKIISRMKRLLLFVFILVILLAATYYGYKGLLWLNDWMNEVDERRQRYSRIK*