Information report for Gh_A06G1439
Gene Details
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Functional Annotation
- Refseq: XP_017643156.1 — PREDICTED: NF-X1-type zinc finger protein NFXL2
- Swissprot: Q9FFK8 — NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
- TrEMBL: A0A0D2RAU3 — A0A0D2RAU3_GOSRA; Uncharacterized protein
- STRING: Gorai.010G197800.1 — (Gossypium raimondii)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Beta vulgaris: Bv2_023730_qswd.t1
- Cicer arietinum: XP_004500492.1
- Gossypium arboreum: Cotton_A_13845_BGI-A2_v1.0
- Juglans regia: WALNUT_00006300-RA
- Lotus japonicus: Lj6g3v0521560.1
- Manihot esculenta: Manes.10G012200.1.p
- Medicago truncatula: Medtr3g070780.1
- Populus trichocarpa: Potri.010G188700.1
- Prunus mume: XP_008233759.1
- Prunus persica: Prupe.2G250200.1.p
- Pyrus bretschneideri: Pbr010904.1
- Ricinus communis: 28162.m000128
- Ziziphus jujuba: XP_015877400.1
Sequences
CDS Sequence:
- >Gh_A06G1439|Gossypium_hirsutum|NF-X1|Gh_A06G1439
ATGAACACAACGGCCAACTACCACCCGCCACCGTCATCGCAACCGCCATTCTCGGACTCGGACCTGGACTCGGACTCCGATTCCGAGAACTTCCAAGTCGGATCCGATCTCTCAAACTCTATTTTCAAAACCTACCTTGAATTTTCCTCATCTTCGTCATCATCATCTTCGATCACAGCCGTTGATCTGTCCAAGATCCAATCATTCTTAACCTCTTCCTCCTCCGGCGCTTTATCATGCCTCATTTGCCTCGAACGGATCCGTCCCTCTGATCCGACGTGGTCTTGCTCTTCCCTCTGCTTCGCTGTCTTCCACCTCCTCTGCATTCAATCATGGGCCCGCCAATCTTCTGACCTTTCAGCAGCACGCGCCGCTGCACGTCTCCCTATCACCGCAGAAACCGCCGCCAAACAAGCCACCTGGAACTGCCCCAAGTGCCGCTCCTCCTACTCCAAATCTGAAATCCCTAGATGTTACCTTTGCTTCTGCGGTAAGCTCCGAGATCCTCCGTCTGACAACCCGTGGATCCTCCCTCACTCTTGCGGCGAAATATGTAACCGCCCGTTGCCAAACAATTGCGGTCACTTTTGCCTCCTTTTGTGCCACCCTGGTCCCTGCCCATCCTGCCCGAAATCCGTCAAAGCGCGTTGCTTTTGCGGCTCCGTCGAAGATTTCCGCCGTTGCGGTTTCAAAAACTTTTCCTGTAACAAACTTTGTAAGAAGCGTTTAGATTGTAACAAACATAACTGCTCCGAAATCTGTCATCCAGGCACGTGCCCTCCTTGCCGTGCACGTGAGACTTACCGTTGCCGGTGTGGTAAAAAGGAAGAAGAGAAAGATTGTTGTGACCGGGATTATCGCTGCGAAAATGAGTGTAAAAAGTTGCTTAACTGTGGAAAGCATGTTTGTAAAAGAGGATGCCACGGGGGAGATTGCGGGGAGTGTCCATTGCAAGGAAATAGGACATGTCCTTGCGGGAAAAGAATTTATGAAGGGCTGCCCTGTGATGGGGTGGCTCCGGTTTGCGGTGCAACTTGTAATAAGCTGTTGAATTGTGGTTTCCATAGGTGTCCCGAGCGGTGTCACAAAGGATCTTGTGTGGAGACTTGTAGGACTATGGTTAAGAAGGCGTGCCGGTGTGGAGGATTGAAGAAAGAGGTTCCTTGCTATCAAGATTTGTCATGTGAAAGGAAGTGTTTGAGAATGAGGGATTGCGGACGCCATGCTTGTAAACGTCGTTGTTGTGATGGAGATTGTCCGCCATGTTCAGAGGTTTGTGATAAGAGGCTTCGCTGCAAGAACCACAAATGCCCTGCTCCTTGCCATAGAGGTGCCTGTGCTCCCTGTCCAATTATGGTGACAATTTCATGTGCATGTGGTGAGACACACTTTGAGGTTCCTTGTGGTACTGAGATGGATCACAAGCCTCCTAAATGCCGTAAATTATGTAAGATAGCTCCTTTGTGCAGGCATGCATCAACCAGTAAGCCGCACAGATGCCACTATGGAGCTTGCCCCCCATGTCGGGCACCTTGTGAAGAAGAATATCCATGTGGTCATAAGTGCAACTTAAGGTGTCATGGGCCAAGACCTCCTCCCAATCCAGAATTCACATTGAAACCCAAGAAAAAGAAATCAAATCATCAGACAGAGTGCACTCCAGGCACCCCTTGCCCTCCTTGCCCAGAACTTGTTTGGAGACCATGTGTTGGCGAGCACTTTGGAGCAGAGAGGATGATGGTTTGCTCCAATACAACACGATTTTCTTGTGATAATTTATGTGGAAATCTTCTTCCTTGTGGCAATCATTATTGTACAAAAACTTGCCATCCCCTGGAGACCCAGCCTTCTTCATCAGGACATCAGAAAAGAAGTGAATCTTGTGAAGTGTGTAATCTCCCTTGCCAGAAGGTGAGGATGCCTAAATGTTCGCACCCCTGCTCCCTACCTTGTCATCCCGGAGAATGCCTTCCTTGCAAAGTGCTCGTGAAACGGTCGTGTCACTGTGGTGCAATGGTCCATGCATTTGAGTGCATCCATTATAACAATTTATCTGAAAAGGATCAAGTGGCTGCTCGCTCATGTGGGGGCCCTTGCCATAGAAAGCTGCCTAACTGTACGCATTTATGTCCTGAAATATGCCATGTTGATAAATGCCCAGCCCCTGATAAGTGCAGCAAAAAGGTTACTGTTCGCTGTAAATGCCAAACCTTGAAGAAGGAATGGATATGCCAAGATGTTCAGGCTGCATATCGTGATACTGGTAATGACCCCAAAGATATACCAAAGAATCAGTTTGGGCTTGGACTTCTGCCTTGCAATTCAGATTGTAAGAGCAAAGTACAGGAGGTTGAGTCAGCTCTACAATTGCGTAAACCTAAGGTTCTGGAGAAAAAAGAGCCAGAAAACGAAAAGCATGGGCCAAAGCGCAGAAAACGGCGGGATCGGATTCAAGAGGGCAAGCAAGTTTCAAGATTTCAGGAATTTGTTGCCAGCGTGAAGCGTCTGCTTTTATTTATCATTATCGGAGCAGCTCTGATTGCAGTCACATATTACAGTTACAAAGGTCTCTTACAACTCTCAGATTGGATGAATGAAGTTGAACTGCAACGAGCAAGACGAAGACGTTCACGATTCTGA
Protein Sequence:
- >Gh_A06G1439|Gossypium_hirsutum|NF-X1|Gh_A06G1439
MNTTANYHPPPSSQPPFSDSDLDSDSDSENFQVGSDLSNSIFKTYLEFSSSSSSSSSITAVDLSKIQSFLTSSSSGALSCLICLERIRPSDPTWSCSSLCFAVFHLLCIQSWARQSSDLSAARAAARLPITAETAAKQATWNCPKCRSSYSKSEIPRCYLCFCGKLRDPPSDNPWILPHSCGEICNRPLPNNCGHFCLLLCHPGPCPSCPKSVKARCFCGSVEDFRRCGFKNFSCNKLCKKRLDCNKHNCSEICHPGTCPPCRARETYRCRCGKKEEEKDCCDRDYRCENECKKLLNCGKHVCKRGCHGGDCGECPLQGNRTCPCGKRIYEGLPCDGVAPVCGATCNKLLNCGFHRCPERCHKGSCVETCRTMVKKACRCGGLKKEVPCYQDLSCERKCLRMRDCGRHACKRRCCDGDCPPCSEVCDKRLRCKNHKCPAPCHRGACAPCPIMVTISCACGETHFEVPCGTEMDHKPPKCRKLCKIAPLCRHASTSKPHRCHYGACPPCRAPCEEEYPCGHKCNLRCHGPRPPPNPEFTLKPKKKKSNHQTECTPGTPCPPCPELVWRPCVGEHFGAERMMVCSNTTRFSCDNLCGNLLPCGNHYCTKTCHPLETQPSSSGHQKRSESCEVCNLPCQKVRMPKCSHPCSLPCHPGECLPCKVLVKRSCHCGAMVHAFECIHYNNLSEKDQVAARSCGGPCHRKLPNCTHLCPEICHVDKCPAPDKCSKKVTVRCKCQTLKKEWICQDVQAAYRDTGNDPKDIPKNQFGLGLLPCNSDCKSKVQEVESALQLRKPKVLEKKEPENEKHGPKRRKRRDRIQEGKQVSRFQEFVASVKRLLLFIIIGAALIAVTYYSYKGLLQLSDWMNEVELQRARRRRSRF