Gene Details:

• Gene ID: evm_27.model.AmTr_v1.0_scaffold00007.36
• Gene Name: AMTR_s00007p00069060
• Gene Family: NF-X1 Family
• Description: NF-X1 Family protein
• Species: Amborella trichopoda
• Source: NF-X1 family gene from PlantTFDB

Protein Features:

• SuperFamily:  SSF57850
• PROSITE profile:  PS50016
• PROSITE pattern:  PS01359
• PROSITE profile:  PS50089
• SMART:  SM00438
• Pfam:  PF01422
• Pfam:  PF01424
• Gene3D:  G3DSA:3.30.70.330
• InterPro:  IPR019787    IPR019786    IPR001841    IPR000967    IPR001374    IPR012677

Annotation Proteins:

• Refseq:  XP_020522415.1  — NF-X1-type zinc finger protein NFXL2 isoform X2
• Swissprot:  Q9FFK8  — NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
• TrEMBL:  W1PDV3  — W1PDV3_AMBTC; Uncharacterized protein
• STRING:  ERN05225  — (Amborella trichopoda)

Gene Ontology:

• GO:0006355  — Biological Process — regulation of transcription, DNA-templated
• GO:0005634  — Cellular Component — nucleus
• GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
• GO:0005515  — Molecular Function — protein binding
• GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

• The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
• The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.

Literature:

• The AtNFXL1 gene encodes a NF-X1 type zinc finger protein required for growth under salt stress.   DOI:  10.1016/j.febslet.2006.07.079 ;  PMID:  16905136

Sequences: