Information report for cra_locus_6555_iso_2
Gene Details
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Functional Annotation
- Refseq: XP_027125745.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027125746.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027125747.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027125748.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027125749.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027125751.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027125752.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027125753.1 — NF-X1-type zinc finger protein NFXL1-like
- Refseq: XP_027167534.1 — NF-X1-type zinc finger protein NFXL1
- Refseq: XP_027167535.1 — NF-X1-type zinc finger protein NFXL1
- Swissprot: Q9SY59 — NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
- TrEMBL: A0A068VER7 — A0A068VER7_COFCA; Uncharacterized protein
- STRING: XP_009622484.1 — (Nicotiana tomentosiformis)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009642 — Biological Process — response to light intensity
- GO:0009651 — Biological Process — response to salt stress
- GO:0009697 — Biological Process — salicylic acid biosynthetic process
- GO:0010188 — Biological Process — response to microbial phytotoxin
- GO:0010310 — Biological Process — regulation of hydrogen peroxide metabolic process
- GO:0042742 — Biological Process — defense response to bacterium
- GO:0005634 — Cellular Component — nucleus
- GO:0000166 — Molecular Function — nucleotide binding
- GO:0003676 — Molecular Function — nucleic acid binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn320981, Achn088191
- Capsicum annuum: CA03g31140
- Daucus carota: DCAR_003534
- Malus domestica: MDP0000280911, MDP0000603846
- Manihot esculenta: Manes.06G003200.2.p
- Nicotiana benthamiana: Niben101Scf05912g02001.1
- Nicotiana tabacum: XP_016451170.1
- Petunia inflata: Peinf101Scf01633g06011.1
- Populus trichocarpa: Potri.012G043700.1
- Prunus mume: XP_016651298.1
- Prunus persica: Prupe.5G236400.1.p
- Pyrus bretschneideri: Pbr038828.1, Pbr028356.1
- Sesamum indicum: XP_011083338.1
- Solanum melongena: Sme2.5_01565.1_g00004.1
- Solanum tuberosum: PGSC0003DMP400024938
- Ziziphus jujuba: XP_015883792.1, XP_015902172.1
Sequences
CDS Sequence:
- >cra_locus_6555_iso_2|Catharanthus_roseus|NF-X1|cra_locus_6555_iso_2
Protein Sequence:
- >cra_locus_6555_iso_2|Catharanthus_roseus|NF-X1|cra_locus_6555_iso_2
MSLPVQSNRRDNNHSRSRNRNNPVQTARHEWVPRGSTPTATVTTTEVSPRLAVDNVNGNGSNGDSGTMLVPPANHNRTNQGFRGSRGQHPFHWREREKEKERDHTKDDKGSKNVNIPLLVQEIQDKLTRNAVECMICYDMVRRSAPIWSCSGCFSIFHLSCIKKWARAPTSVDLSAEKSQGFNWRCPGCQAVQLISSKEIRYVCFCGKRHDPPSDLYLTPHSCGEPCGKPLEKEIPGAGMSKDDLCPHLCVLQCHPGPCPPCRAFAPPRRCPCGKKVITTRCSDRKSVLTCGQICDKPLECGRHRCKRICHVGPCDPCQVLFNASCFCQKKTEVVLCGDMALKGEIRVENGVFSCNSTCEKKLNCGNHACLEICHPGPCGECSMLPSKIKTCCCGKTSLKEKRESCVDPVPTCSETCEKLLPCGVHRCKEMCHSGACAPCPILVTQKCRCGSTSRTVECYKTQLENEKFTCDKPCGRKKTCGRHRCSERCCPLSSSNSSGAVNWDPHFCSMPCGKKLRCGQHSCPSLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPSPSCQYPCSVPQPCGHSSTHSCHFGDCPPCTIPIAKECIGGHVVLRNIPCGSKDIRCNKLCGKTRQCGLHACARTCHPPPCDCPTEPAVGSRASCGQTCGAPRRDCRHTCSALCHPSAPCPDLRCEFPVTISCSCGRITANVPCDAGGNNSGYTADTVLEASILHKLPAPLQPIEGTVKVPLGQRKLMCDEECSKMERKKVLADAFGVAAPNLEALHFGETSVVSEVLSDLLRRDPKWVLSVEERCKYLVLGRGRGGLNALKVHVFCPMLKEKRDAVRLIAERWKLSVNAAGWEPKRFVVVHVTPKSKAPVRMLGVKGCVAGSLLQPSVFDPLVDMDPRLVVSLFDLPRDADISALVLRFGGECELVWLNDKNALAVFSDPARAATAMRRLDQGSIYHGAAVVPHSGGSSAAVSGPNAWGSTGGTRDGNAVAALKSNPWKKAVMQEPDSRESAWDAEEWSDDSGDGRSSVWKGKEAPTPIAATNRWSVLESETTSSSSSKGTSHKEDHPSNRPGSPLASASDPGTSSPVLQTKQEGGADLDEMSDVVDDWEKAYD