Information report for Carubv10008145m
Gene Details
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Functional Annotation
- Refseq: XP_006306627.1 — NF-X1-type zinc finger protein NFXL1
- Swissprot: Q9SY59 — NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
- TrEMBL: R0ILT0 — R0ILT0_9BRAS; Uncharacterized protein
- STRING: XP_006306627.1 — (Capsella rubella)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009642 — Biological Process — response to light intensity
- GO:0009651 — Biological Process — response to salt stress
- GO:0009697 — Biological Process — salicylic acid biosynthetic process
- GO:0010188 — Biological Process — response to microbial phytotoxin
- GO:0010310 — Biological Process — regulation of hydrogen peroxide metabolic process
- GO:0042742 — Biological Process — defense response to bacterium
- GO:0005634 — Cellular Component — nucleus
- GO:0000166 — Molecular Function — nucleotide binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Carubv10008145m|Capsella_rubella|NF-X1|Carubv10008145m
ATGAGCTCTCAAGTCAGGAGGGATCGGAGAGAAAGGCCAAGGTTCACTTCTCGAACTACCCAGCAAACATGGGTTCCTAGAGGAACCTCCTCTACCTCCGTGGTTGTAAATGAGACTCCCTTTCCTCTTGATGCAAATACAAATTCGGGAAACCTTGATGATGCTGGTGCTAGACCTGGTCCTGTTTATCAGCAAAGGCAGCACTATGAGTCTGCTCCTCTGCTCAATGACCCGCGTCAAAGGAGTAATGTCCCAGGTCCTCCTTCTTATAGCCGCCAAAGGAGAAACAATGTTTCGAGACCTGTACTGGATAACCGTCAGAGAGGTGGGGATAGGGGTCGCTTGCCCCGGACTGGGAATGAGGGAACAGGGTTGGATAGAGAAAGGAATAAACATAACGAGAATACTATGATGACAGACCCAAATCTGCCTCAACTTCTGCAAGAGATACAGGATAAGCTAATGAAGGGTTCTATTGAGTGTATGATTTGTTATGACATGGTTAGAAGGTCTGCTAATATCTGGTCTTGCTCCAGTTGTTACTCTATATTCCATCTGAACTGTATTAAGAAATGGGCTCGAGCACCAACTTCGGTTGATTTGTTGGCGGATAAAAACCAAGGTAGTAATTGGAGATGTCCAGGTTGTCAGTTTGTTCAGTTAACATCGTCAAAGGAGATACAATATCGATGCTTTTGTGGAAAGAGGAAAGACCCACCTAGTGATCCGTATCTGACTCCTCACTCTTGTGGAGATATCTGTGGGAAGCCGCTGGAGAAAGAATTTGCGACAGCTGCAACTGTTAAAGAAAATACATGTCCTCATGTTTGTGTATTGCAGTGTCATCCTGGTCCATGCCCTCCATGCAAGGCGTTTGCCCCACCTCGTAATTGTCCATGCGGGAAGAAGATGATCAGAACTAGATGCTCCGAAAGAAAATATGATCTTACTTGTGGGCAGAGTTGCGATAAGCTTCTTAATTGTGGTCGTCATCGATGTGAAAGGGCATGTCATGTAGGCCCTTGTGATAGTTGTCAGGTACAAGTCAATGCCTCCTGCTTTTGCAAGAAAACGGTGGAGAGTGTAATTTGTGGTGAAATGAATGTGAAAGGAGAGGTGACAGCAGAAGATGGCGTCTTTTCATGCAAACTAAACTGCAGAAAACAGCTTGAGTGTGGAAACCATGAATGTCGTGATGTTTGCCATCCTGGGCCTTGTGGGGACTGTGAGTTCCTGCCTAGTAGAATTAAGGCATGCTATTGTGGGAAAACGAGTTTGGAAGAGGAGAGGCAGAGTTGCCTTGATCCAATTCCTTCTTGCTCAAACATTTGCAGCAAGCTTCTTCCTTGTGGGTTGCATAACTGCAATGAGATGTGCCATCCAGGTGGTTGTTCGCCTTGTTTAGTCCAAGTGAGGCAAAAATGTCGGTGCGGTTCAACATCCCGAACTGTGGAATGCTACAAAACAGTTTCAGAGACCGAGAAGTTCATTTGCGCCAAACCATGTGGCCGTAAGAAAAACTGTGGGAGGCATAGATGTAGTGAGCGGTGCTGCCCTCTCTTGAACCACCCAAAGAATGATGATTTGTCAGGCGATTCTGATCTCCACTTTTGCCATATACCTTGTGGAAAGAGGCTAAGGTGTGGACAACATTCCTGTGAAACTCTATGTCACACTGGTCACTGTCCTCCTTGCCTTGAGATGATTTTCACTGATCTTGCATGTGCTTGCGGAAAAACTTCGATACCTCCTCCATTACCATGTGGAACACCTGTCCCGAGTTGTCAGCTTCCTTGCTCAGTTCCTCAGCCTTGTGGCCATTCCGCGACGCATGGTTGCCATTTTGGAGACTGCATGCCTTGTTCAGTACCCGTGGAGAAGAAATGCATTGGTGGTCATGTGGTTCTCAGGAATATACCGTGTGGGTTAAAAGACATTAGGTGTAACAAAATATGCGGAAAAACAAGGTGTTGTGGCATGCATGCTTGTGCCAGGACGTGTCACCCTGAACCTTGTGACAATGGTGGTAACGCATCTGTAACTGGTCTGCGTGTAACTTGTGGTCAGACGTGTGGTGCTCCTAGAAGAGACTGCAGACACACATGTGCAGCGCTGTGTCATCCTTCTGCGCCTTGCCCTGATCAGAGATGTGAGTTTCCACTCAAAATTACTTGTTCATGTGGTCGCATAACAGCTACCGTCCCTTGTGATGCTGGAGGAAGTGCTGGTGGTTTTAGTGGTGACTCTATCTATGAAACCTCCATTTTGCAGAAGCTTCCAGTGCCGCTCCAACCTGTCGAGTCAAATGGGAATAGGATCCCTCTTGGGCAGAGAAAGCTTACTTGTGATGAGGAGTGTGCTAAGCTGGAGCGTAAGCGGGTTCTTCAAGATGCATTTGATATCACTCCTCCAAATTTAGACGCTTTACATTTTGGTGAGAATACTGCCATGACTGAGGTAATTTTAGATCTTTATAGACGTGACCCCAAGTGGGTGCTAGCAGTTGAGGAGCGATGCAAGTTTTTGGTACTTGGAAAGGCCAGAGGTAGCACAATTAGCTCCCTAAAGCTCCATATCTTCTGTACTATGGAAAAGGATAAAAGAGATGCAGTACGGTTGATAGCTGAAAGGTGGAAACTTGCTGTAAGCAATGCCGGGTGGGAACCAAAACGCTTTGTAGTGGTTTACGTTACACAGAAGTCAAAACCCCCTACAAGGATCATTGGAGTTAAAGGTGTTATCTCAGTAGGCGCGCCCCATGCACCAGCCTTTGATCCACTGGTTGATATGGATTCTCGACTCGTGGTTTGTTTTTTTGATCTCCCAAGGGAAGCTAACATCAGTGCCTTGGTTCTGAGATTTGGAGGTGAATGCGAGCTTGTTTGGTTGAATGACAAGAATGCATTAGCCGTCTTCCACGATCCAGCTCGAGCAGCCACTGCCATGAGAAGGCTTGAACACGGTTCTGTGTACCAAGGAGCGGTTGTTGTTGTACAGAACCCAGGACAATCTCCATCTCTCAGTAACGCATGGGGAATACCGGGTAGCTCGGTTCAGAAAGGAAATCCTTGGAATAAGGCGGTGGTTAAGGAATTAGATGACTCTTGGGAAACAGAGGATTCTCCCATTGGAGGGTCTATGTGGAAAACAGCAAAGGATAGCGATTTGATCACTCCCAACCGTTGGACCATACTCGAGTCAGATAAGGCTGTCTCAGTGGAGCCGCTAGCTCAGACCGAAGGGACAAGTAGTTCGGAAGCTGCTGGTAAGCAACCTGAAGAGACTTCAGTGGTTGATGACTGGGAGAAAGTATGCGACTGA
Protein Sequence:
- >Carubv10008145m|Capsella_rubella|NF-X1|Carubv10008145m
MSSQVRRDRRERPRFTSRTTQQTWVPRGTSSTSVVVNETPFPLDANTNSGNLDDAGARPGPVYQQRQHYESAPLLNDPRQRSNVPGPPSYSRQRRNNVSRPVLDNRQRGGDRGRLPRTGNEGTGLDRERNKHNENTMMTDPNLPQLLQEIQDKLMKGSIECMICYDMVRRSANIWSCSSCYSIFHLNCIKKWARAPTSVDLLADKNQGSNWRCPGCQFVQLTSSKEIQYRCFCGKRKDPPSDPYLTPHSCGDICGKPLEKEFATAATVKENTCPHVCVLQCHPGPCPPCKAFAPPRNCPCGKKMIRTRCSERKYDLTCGQSCDKLLNCGRHRCERACHVGPCDSCQVQVNASCFCKKTVESVICGEMNVKGEVTAEDGVFSCKLNCRKQLECGNHECRDVCHPGPCGDCEFLPSRIKACYCGKTSLEEERQSCLDPIPSCSNICSKLLPCGLHNCNEMCHPGGCSPCLVQVRQKCRCGSTSRTVECYKTVSETEKFICAKPCGRKKNCGRHRCSERCCPLLNHPKNDDLSGDSDLHFCHIPCGKRLRCGQHSCETLCHTGHCPPCLEMIFTDLACACGKTSIPPPLPCGTPVPSCQLPCSVPQPCGHSATHGCHFGDCMPCSVPVEKKCIGGHVVLRNIPCGLKDIRCNKICGKTRCCGMHACARTCHPEPCDNGGNASVTGLRVTCGQTCGAPRRDCRHTCAALCHPSAPCPDQRCEFPLKITCSCGRITATVPCDAGGSAGGFSGDSIYETSILQKLPVPLQPVESNGNRIPLGQRKLTCDEECAKLERKRVLQDAFDITPPNLDALHFGENTAMTEVILDLYRRDPKWVLAVEERCKFLVLGKARGSTISSLKLHIFCTMEKDKRDAVRLIAERWKLAVSNAGWEPKRFVVVYVTQKSKPPTRIIGVKGVISVGAPHAPAFDPLVDMDSRLVVCFFDLPREANISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLEHGSVYQGAVVVVQNPGQSPSLSNAWGIPGSSVQKGNPWNKAVVKELDDSWETEDSPIGGSMWKTAKDSDLITPNRWTILESDKAVSVEPLAQTEGTSSSEAAGKQPEETSVVDDWEKVCD*